ID HQ644141; SV 1; linear; genomic RNA; STD; VRL; 4848 BP. XX AC HQ644141; XX DT 26-APR-2011 (Rel. 108, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 2) XX DE Groundnut ringspot and Tomato chlorotic spot virus reassortant segment M, DE complete sequence. XX KW . XX OS Groundnut ringspot and Tomato chlorotic spot virus reassortant OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; unclassified Tospoviridae. XX RN [1] RP 1-4848 RX DOI; 10.1016/j.virol.2011.02.011. RX PUBMED; 21382631. RA Webster C.G., Reitz S.R., Perry K.L., Adkins S.; RT "A natural M RNA reassortant arising from two species of plant- and RT insect-infecting bunyaviruses and comparison of its sequence and biological RT properties to parental species"; RL Virology 413(2):216-225(2011). XX RN [2] RP 1-4848 RA Vanderspool C., Webster C.G., Adkins S.; RT ; RL Submitted (22-NOV-2010) to the INSDC. RL Agricultural Research Service, United States Horticultural Research RL Laboratory, 2001 South Rock Road, Fort Pierce, FL 34945, USA XX DR MD5; 521dcebfc1634e6b811482e273030233. DR EuropePMC; PMC5787326; 29373979. XX FH Key Location/Qualifiers FH FT source 1..4848 FT /organism="Groundnut ringspot and Tomato chlorotic spot FT virus reassortant" FT /segment="M" FT /host="Solanum lycopersicum" FT /isolate="LGMTSG" FT /mol_type="genomic RNA" FT /country="USA:FL" FT /collection_date="Feb-2010" FT /db_xref="taxon:1027232" FT gene 100..1011 FT /gene="NSm" FT CDS 100..1011 FT /codon_start=1 FT /gene="NSm" FT /product="nonstructural movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:F5B5Y1" FT /protein_id="AEB90409.1" FT /translation="MLTFFGSKKPSESEKTDEGPLVSLTKRNGNVEVSRSWSQSNEKEA FT LAKNMDVSKGKILLNTEGTSSLGTYESDSITESEGYDLAARMIVDTNHHISNWKNDLFV FT GNGKQNATKIIKICPTWDSRKQYMMVSRIVIWICPTIPDPTGKLLIALIDPNMPSDKQV FT ILKGQGTITDPICFVFYLNWSIPKANNTPENCCQLHLMCSQEYKKGVSFASVMYSWTKE FT FCDSPRADKDKCCTVIPLNRAIRARSQAFIEACKLIIPKGNSAKQIKKQLKDLSTNLEK FT SVEEEEEGVCDNIAKLSFVDEI" FT gene complement(1360..4764) FT /gene="GnGc" FT CDS complement(1360..4764) FT /codon_start=1 FT /gene="GnGc" FT /product="glycoprotein precursor protein" FT /db_xref="GOA:F5B5Y2" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:F5B5Y2" FT /protein_id="AEB90410.1" FT /translation="MRLIKLLELMIKLSLFAIALSSVLLSILLFRATDAKVEIIRGDHP FT EIYDDSSENEVSTTSLMLRRTVPEVLPDGNFKAHSDKSRIERAEKQAPVLQDETGTEKA FT VSIQEVPNNCLNASLKCEIKGVSTYNVYYQVENNGVICSCVSDSADNLGRCDNSQNLPK FT KFPEIPVIPITKLDNKRHFSVGTKFFITENLASSNYPVSYNLHQTEGIVSLQTVKLSGD FT CKITKSNFANPYTVSITSPEKIMGYIIKRPGEDGEHKVMAFSGSVSITFSEEMLDGNHN FT LLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVNK FT TTKPLFLWYDLIGLITYPLLLILNYLWKYFPFKCANCGNLCIVTHECTKKCICNKSKAS FT REHFSECPILSKEPDHEYNKYKWTSMEWFHLIINTKLSLSLLKFITEVLIGLIILSQMP FT MSMAQTAQCLNGCFYVPGCNQMVTSKFEKCPEANQCFCSVRKEKIVESIFGTNIVIEGP FT NDCIANQDCLESSPMDTFIKCRLGCEYLELSRNKPLFNSFVDYTGSSLGLTSASLYMTK FT RLRNGIIDSYNVTDKISGIVAGDSLKQNETSIPENILPRQSLIFDSVIDGKYRYMIEQS FT LLGGGGTVFMLNDKTSGAAKKFTIYIRSTGIHYEVSEKYTTAPIMSTHTDYYSTCTGNC FT DTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNVYDMDKSYRIYSVLK FT STIIADVCISGILGDQCTKISEEVPYENSVFQADIQADLHNDGITVGELIAHGPDSHIY FT AGNIANLNDPVKMFGHPQLSHDGVPIFTKKTLSGEDMSWDCAAIGKKSVTIKSCGYDTY FT RFKSGLEQISDIPVTFKDLSSFFLEKTFSLGKLKMVIDLPSDLFKVAPKKPSITSTRLE FT CNGCLLCGKGLSCNFEFFSDLVFSTSISVESCSLSSYQLAVKKGSNKYNITMYCSVNPD FT KKKIKMYPEGNPELSVEVPINTVVVKDPENIIDQNDEYAHEEQQYNSDSSAWGFWDYIK FT SPFNFVASYFGSFFDTIRVILLIAFIFLVIYLCSMLVSMCRGYVKNGSYKIRSKIEDDD FT DMEIKEPMMVRDTMTRRRPPMDFSHLV" XX SQ Sequence 4848 BP; 1526 A; 914 C; 876 G; 1532 T; 0 other; agagcaatca gtgcgtcaga aatataccta taatacactt tgcaagaata aatcaattac 60 attacacaag ctcctctgcc gtaggctgtt gaaatcaaca tgttgacatt tttcggcagc 120 aagaaaccct ctgagtctga aaagacagat gaaggtccct tggtttcatt gaccaaacgc 180 aatgggaatg ttgaagtctc tagatcatgg tctcaatcta atgagaaaga agctctggca 240 aaaaatatgg atgtatctaa aggtaagata ttattaaaca ctgaaggaac ttcctctcta 300 ggaacctatg agtcagactc tatcacagaa tcagagggtt atgatctagc tgcaagaatg 360 atagtggata caaaccatca tatttccaac tggaaaaatg atttgtttgt tggcaacggg 420 aagcagaatg caactaagat cattaagata tgccctacat gggatagcag aaagcaatac 480 atgatggttt caaggattgt gatatggatt tgtccaacca taccagaccc tacaggcaag 540 ctcttaatag cattaattga ccctaacatg ccttctgaca agcaggtgat tctaaagggt 600 cagggaacaa taacagatcc aatatgcttt gttttttatc taaactggtc tatcccaaaa 660 gcgaacaaca cacctgaaaa ctgctgtcag ctgcatttaa tgtgcagcca agagtataaa 720 aaaggagtct catttgcaag tgtcatgtac tcatggacaa aagaattttg tgattctcca 780 agagctgata aagataagtg ttgcactgtt atacccttaa atagagctat ccgggctagg 840 tcccaagcct ttattgaagc ctgcaagcta ataatcccaa agggcaatag tgcaaaacaa 900 attaagaagc agcttaaaga tcttagtacc aacctggaga aatctgttga agaagaagaa 960 gaaggtgttt gtgataacat tgccaaactt tcgtttgtgg acgagatata gtatcatgct 1020 gtttcatctt gatagataat taaaagtatt ttattctgaa cgtagcaagt ccacaagtat 1080 ctataaaaat caatctcgaa gtcaagtata attacaatta aacaaaaaat ccaaaaaaat 1140 ctgaaaacca aaaatcaaaa atccaaaaaa atctaaaaac caggaaaaca aacaaaaaca 1200 aaacaaataa ggctgaaaag ccaaatttgg cccgaaggct cttttttttg gtttttttag 1260 atatatacat atatatgtat atgtatttat atattcattt tattagtttt tattttattt 1320 tatgtagttt taatcagcaa ttaatttgaa catgcaattt taaaccagat gagagaagtc 1380 cataggtggt cttcttctcg tcattgtgtc tctaaccatc ataggttcct taatttccat 1440 gtcatcgtca tcttcaatct tagatcgaat tttataggaa ccgtttttaa catatcctcg 1500 acacatggaa accagcatag aacataaata gattaccagg aagataaagg ctataagcag 1560 tataactctg atagtgtcga agaaagatcc gaaataactg gcaacaaaat tgaaaggact 1620 cttgatataa tcccaaaaac cccatgcaga agaatctgaa ttatactgtt gttcttcgtg 1680 agcgtactca tcattctgat ctatgatgtt ttcaggatct ttaactacta ctgtgttaat 1740 tgggacttcc acagaaagtt caggattccc ttctggatac attttgatct tcttcttatc 1800 tggattaacc gagcaataca ttgttatgtt atacttattt gatcctttct tcacagctaa 1860 ttgatagctg gatagagaac aagattccac agagattgag gtagagaaca ccaagtctga 1920 aaagaactca aaattgcaag acaagccttt cccacataaa agacagccgt tgcattctaa 1980 tctagttgaa gttatagatg gcttctttgg agctacttta aagagatcag aaggaagatc 2040 tattaccatt ttcagtttcc ctaagctgaa tgttttctct aaaaagaagc tggaaagatc 2100 tttgaaggta acaggaatat ctgatatctg ttccaatcca gatttgaacc tatatgtgtc 2160 ataaccacag gattttatgg tgaccgactt cttacctatc gctgcacaat cccaagacat 2220 atcttcccct gaaagggttt tcttagtgaa gataggcaca ccatcatgac tcaactgtgg 2280 atgcccaaac attttcacag gatcatttaa gttggcaatg ttccctgcat atatatgact 2340 atcaggtcca tgagctatta gttcacctac agttattcca tcattgtgca aatctgcttg 2400 tatatcggct tggaaaacag agttttcgta aggtacttct tcagagattt tggtacattg 2460 atctcctaaa atgccagaaa tgcatacgtc ggctattata gtagatttta agacagaata 2520 gatcctgtaa gatttatcca tgtcataaac atttctgcaa aagccacaag ttgctccttc 2580 gttaatggca aagcaccatg cttcctcaca gccccagtaa gatgttggtg taatgcaaaa 2640 gtcttggaaa ccggtcaaag cttgattttt tctacatgta tcacaattgc cagtgcaagt 2700 cgagtaataa tctgtgtgag tgctcatgat aggagctgtc gtgtactttt cagaaacttc 2760 ataatggatt cctgtgctcc ttatgtaaat tgtaaacttc tttgctgctc cagaggtttt 2820 atcattcaac atgaacacag ttccgcctcc tccaagtaga gattgttcta tcatgtatct 2880 gtatttaccg tctatgacag aatcaaagat taatgattgg cgaggtaata tattctcagg 2940 tatacttgtc tcattctgct tcagagagtc tccagctact attcctgaaa ttttatctgt 3000 cacattatat gagtctatta tgccattcct caatcttttt gtcatgtata agcttgcaga 3060 ggttagccct aaagagcttc ctgtgtaatc cacaaaacta ttgaataagg gtttattccg 3120 agatagctcc aaatattcac aacctaatct gcactttatg aaagtgtcca tagggctgct 3180 ttccaggcaa tcttgattag caatacaatc attaggtcct tcaattacaa tgttagtccc 3240 gaaaatgctt tctactattt tctccttcct aacactgcag aagcattgat ttgcttctgg 3300 gcacttttca aacttgctag taaccatttg attacaccct ggaacgtaaa aacagccgtt 3360 tagacattga gctgtttgag ccattgacat gggcatttga gacagtataa tcaaccctat 3420 gagaacttct gtgataaatt tgagtaagct caggctaagt tttgtgttta ttatcaggtg 3480 aaaccattcc atgctagtcc atttgtattt gttatattca tgatctggtt cctttgaaag 3540 tatagggcat tctgaaaaat gctctcttga agctttgctt ttgttgcaaa tgcatttttt 3600 tgtgcattca tgcgtaacaa tgcataagtt gccacagttg gcacacttga acggaaaata 3660 tttccacaga taatttaaaa tcaacagcaa agggtaagtg atcaagccta taagatcata 3720 ccacaaaaac agaggcttgg tggtcttatt caccaaccag cgtatgggga aatatatcaa 3780 caatgcaatc aaaattagac gtatccaaga gaaattgatg caagctgttt gtttgtagat 3840 gctcttagaa tacttaatta tgcaatctct gactctttta tttgttttag gaatttttgc 3900 tgatttatca ccgcacaaga gattatgatt tccgtctaac atttcctcac taaacgttat 3960 actaactgat ccagaaaaag ccatgacttt gtgctctcca tcttctcccg gtctcttgat 4020 gatatagccc ataattttct ctgggctagt gatgctcacg gtgtatggat tggcaaaatt 4080 agatttagtt atcttgcaat cacctgaaag cttaacagtc tgcaatgaaa caataccttc 4140 agtttgatgt agattatagg aaaccgggta attactagag gctaggttct cagtgataaa 4200 gaactttgtt ccaacagaaa aatgcctttt gttgtctaat ttagttatgg ggatcacagg 4260 aatttctgga aatttcttcg gtagattttg ggaattgtca caccgcccca gattatctgc 4320 agaatctgaa acacaagaac aaatgacacc attattttca acttgatagt acacattgta 4380 agttgatact cctttgatct cacattttag ggatgcattc aggcaattgt tagggacttc 4440 ttgtatagat acagcttttt ctgtgccagt ttcatcttga agaacaggag cctgcttctc 4500 agctcgttct attctggatt tatcagagtg tgctttgaag ttcccatcgg gaagaacctc 4560 tgggactgtt ctgcgcaaca tcaaagaagt tgtagatacc tcattctcag aagaatcatc 4620 ataaatttct gggtgatctc ctcgaattat ttccactttt gcatcagtag ccctgaacaa 4680 cagaatgctc agtaaaactg agcttagtgc tattgcaaaa agactcagtt ttatcattag 4740 ttctagtagt tttattagtc tcattctaaa cgtttgcctg gattgtgatg gttgtctgtt 4800 taattgtact atgtccgggt taagattttt gtttgcactg attgctct 4848 //