ID HQ606468; SV 1; circular; genomic DNA; STD; VRL; 2569 BP. XX AC HQ606468; XX DT 31-MAY-2011 (Rel. 109, Created) DT 31-MAY-2011 (Rel. 109, Last updated, Version 1) XX DE Tomato severe rugose virus isolate Pi-1 segment DNA B, complete sequence. XX KW . XX OS Tomato severe rugose virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2569 RA Barbosa J.C., Barreto S.S., Inoue-Nagata A.K., Rezende J.A.M.; RT "Complete molecular characterization of tomato isolate of Tomato severe RT rugose virus and experimental host range in Brazil"; RL Unpublished. XX RN [2] RP 1-2569 RA Barbosa J.C., Barreto S.S., Inoue-Nagata A.K., Rezende J.A.M.; RT ; RL Submitted (13-NOV-2010) to the INSDC. RL Plant Pathology and Nematology, Esalq/USP, Padua dias, 11, Piracicaba, Sao RL Paulo 13418-900, Brazil XX DR MD5; 3dfd5fad26cc45bea439a7ff72ff6b27. XX CC GenBank Accession Numbers HQ606467-HQ606468 represent the complete CC genome of Tomato severe rugose virus isolate Pi-1. XX FH Key Location/Qualifiers FH FT source 1..2569 FT /organism="Tomato severe rugose virus" FT /segment="DNA B" FT /host="tomato" FT /isolate="Pi-1" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collected_by="Julio C. Barbosa" FT /collection_date="Oct-2007" FT /db_xref="taxon:158463" FT gene 408..1178 FT /gene="BV1" FT CDS 408..1178 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:D3K2N4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:D3K2N4" FT /protein_id="AEG20852.1" FT /translation="MYPIKYRRGMSFNHRRSYSSNPVFKRLHGAKRSDFKRRSSNQIKS FT MDETKMSVQRIHENQFGPEFVIGHNSAISTFITFPTLCKTVPNRCRSYIKLRRLRFKGT FT IKIDRVHAEVNMDGTSPMIEGVFSLVVVVDRKPHLGSSGTLHSFDEIFGARIHSHGNLA FT IVSSLKERFYIRHVWKKVISVEKDTTMVDVEGSTILSNRRFNCWSSFKDIDRESCNGVY FT ANISKNALLVYYCWMSDNVSKASTFVSFDLDYVG" FT gene complement(1304..2185) FT /gene="BC1" FT CDS complement(1304..2185) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:F6KSZ1" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:F6KSZ1" FT /protein_id="AEG20853.1" FT /translation="MESQLVNPPNAFNYIESKRDEYQLSHDLTEIMLQFPSTASQLSAR FT LSRSCMKIDHCVIEYRQQVPINAVGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQSTHFAKFKGRLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDIDFSHVGYGKWERKMIRSASISRLGLHNPLEIMPGESWAVRSTVGLSPSEAG FT SDIENAMHPYRQLHRLGTGTLDPGDSASVIGAQRAQSNITLSMAQLNELVKAAAHECIN FT SNCTPSQPKSLK" XX SQ Sequence 2569 BP; 735 A; 441 C; 535 G; 858 T; 0 other; accggatggc cgcgcgattt ttcttaactg ctacgtggcg aaatcgtgta cgttgcctcg 60 cgctttccat tttaattgag cgcattttga agtccgcgaa atgagttaat tgtatttttg 120 aaatccgctt ttgtgaatca cctttaattt gaattaaagg ttggatagtt cgtattgatc 180 aatcatttcg ctggtttatt tcctgtcgtg gtgtaattac aaccgttcgt taaaaatata 240 agaaatttac gacgtggact ctctaaattt catctacaca gttaatttga caaatgaatg 300 catatttaaa ctatgctttc gtgtgggttt acaccacgtc tatacatatt gtctaggtta 360 ttttgtctaa gtataatttt tattttgtct tatcttatta tctgaacatg tatcccatta 420 agtatagacg tggaatgtcg tttaatcatc gacgatctta ctcatctaat cccgtattta 480 agcgtttaca cggagcgaaa cgaagtgatt tcaagcgtcg ttcgagtaat cagattaaga 540 gcatggatga gactaaaatg tctgttcagc ggattcatga gaaccagttt ggccctgaat 600 ttgtaattgg acacaattct gccatatcca cattcattac attccctact ctttgtaaga 660 ctgtcccgaa ccgttgtagg tcatacataa agttaagacg actacgtttt aaaggaacaa 720 tcaagattga ccgtgttcat gctgaggtga atatggacgg tacaagtcca atgattgaag 780 gagtcttctc tctggttgta gtcgttgatc gcaaacctca tttgggctca tctggaactc 840 tgcattcttt tgatgagata tttggtgcaa ggattcatag tcatggtaac ctggcaatag 900 tatcctctct gaaagagcgt ttttacatac gtcacgtttg gaagaaagta atatctgttg 960 agaaggatac aaccatggtt gatgttgaag gaagtactat tttatctaac aggcgtttta 1020 attgttggtc atcctttaag gatattgacc gtgaatcatg taatggtgtt tatgcaaaca 1080 taagcaagaa cgccctgtta gtttattact gttggatgtc tgataatgtg tctaaggcat 1140 cgacatttgt atcatttgac cttgattatg ttggctaaat aataagtgta atatgtgatt 1200 agtaataatg tttaactcgc ttcaataata aatacaagaa tttgttcagt aataatattc 1260 aactcgcaat aataacaaaa aaatgtgttt aataatatag aatttatttt aaagattttg 1320 gctgtgaagg agtacagttg ctgtttatac attcatgggc cgctgcttta acaagttcgt 1380 ttaattgggc cattgacagt gttatgttcg attgggccct ttgagcacca attacggacg 1440 cagaatcacc tgggtctaaa gtgcctgtac ccagtctatg taattgtctg tatggatgca 1500 tcgcgttctc tatatctgag cccgcctctg atgggcttaa gcctacagta cttctaacag 1560 cccatgactc tccgggcatt atttcaagtg ggttgtgaag gcccaatctt gatattgagg 1620 cggatctgat catcttcctt tcccatttgc catagcctac gtgactgaaa tcaatgtcct 1680 tatctgtaaa ttgttttgaa aggatcttca ccgttggggc acggaaaggt atatcaaccg 1740 aatgtttagc cgtcgagagt ttcagtctcc ctttgaattt agcgaagtgg gtactctggt 1800 gaacgttcgt gtcacatact ctgtagtaca atttccatgg aattgggtcc ttaagggaga 1860 agaacgacga cgaaaagtag tgaagatcta tgttacatct gataggaaag gtccacgacg 1920 cctgtagtga ttcattgtcc gtcattcttt tgtcatgaat ttcgactata actgaaccta 1980 cggcgtttat tggtacctgt tgtctgtatt ctattacgca atggtcgatt ttcatacagc 2040 tacgactaag ccttgcgctt aattgagacg ccgttgaagg gaattgaagc ataatctcgg 2100 ttagatcatg ggaaagctga tattcatcac gcttagattc tatataatta aatgcgttgg 2160 gaggattcac aagctgagat tccattattg aaaataggga gcgcagcgac aatgtttgag 2220 gaaacttaat aagggaagat gataatattt tcgtcaactg aatatatgac aagaaaattg 2280 tctgttgatc caattggaaa attggagatg ataataacta aaaaacgagg aatcagaaga 2340 agacgaattg agatgagata ttgtctattt tcggtgtaat tgataaatac ttctccattt 2400 gctctttaaa tagatttttt aaggcaatgg catatttgta aatatgaccc ttactaccaa 2460 ttggtagctg ctctaaaact catatgaatt ggtagttatg gtagctctta tatagtagaa 2520 gttctttcta aggagattgc tacacgtggc ggccatccgt tataatatt 2569 //