ID   HQ597031; SV 1; linear; genomic DNA; STD; VRL; 507 BP.
XX
AC   HQ597031;
XX
DT   25-MAY-2011 (Rel. 108, Created)
DT   25-MAY-2011 (Rel. 108, Last updated, Version 1)
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DE   Tobacco curly shoot virus isolate SILIGURI-1 pre-coat protein (AV2) gene,
DE   complete cds; and coat protein (AV1) gene, partial cds.
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KW   .
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OS   Tobacco curly shoot virus
OC   Viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-507
RA   Saha A., Saha B., Saha D.;
RT   "Geminiviruses infecting cultivated tomato plants of sub-Himalayan plains
RT   of East-India: occurrence, detection, host range and diversity analysis";
RL   Unpublished.
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RN   [2]
RP   1-507
RA   Saha B., Saha A., Saha D.;
RT   ;
RL   Submitted (12-NOV-2010) to the INSDC.
RL   Department of Botany, University of North Bengal, Siliguri, West Bengal
RL   734013, India
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DR   MD5; 7b1f3e06f58104a0ec0bfb13b2f41b6b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..507
FT                   /organism="Tobacco curly shoot virus"
FT                   /segment="DNA-A"
FT                   /host="Lycopersicon esculentum L."
FT                   /isolate="SILIGURI-1"
FT                   /mol_type="genomic DNA"
FT                   /country="India:West Bengal: Siliguri"
FT                   /collected_by="Bikram Saha"
FT                   /collection_date="Dec-2009"
FT                   /PCR_primers="fwd_seq: taatattacckgwkgvccsc, rev_seq:
FT                   tggacyttrcawggbccttcaca"
FT                   /db_xref="taxon:180526"
FT   gene            122..469
FT                   /gene="AV2"
FT   CDS             122..469
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="pre-coat protein"
FT                   /note="structural protein"
FT                   /db_xref="GOA:Q776Z1"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q776Z1"
FT                   /protein_id="AEF38351.1"
FT                   /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL
FT                   ISVIRARNYVEASSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ
FT                   KTQDVQDVQKS"
FT   gene            282..>507
FT                   /gene="AV1"
FT   CDS             282..>507
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="structural protein"
FT                   /db_xref="GOA:F6KSG4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:F6KSG4"
FT                   /protein_id="AEF38352.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQ"
XX
SQ   Sequence 507 BP; 136 A; 118 C; 115 G; 138 T; 0 other;
     tgattttttt taaagtgggc cccttgatgt gatatgtcat tcaatcagaa cgctccccta        60
     aagcttaatt gttttgtggt cccttattta tacttgctct gcaagtagtg cactccgcac       120
     tatgtgggat ccattagtaa acgagtttcc cgaaaccgtt cacggcttta ggtgtatgtt       180
     agcagttaaa tatctgcagt tagtagagaa aacgtattct cccgacacat tagggcacga       240
     tttaattagg gatttaattt cagttattag ggctagaaat tatgtcgaag cgtccagcag       300
     atataatcat ttccacgccc gcttcgaagg tacgccgccg tctcaacttc gacagcccat       360
     atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaagagca tgggcgaaca       420
     ggcccatgaa cagaaaaccc aggatgtaca ggatgtacag aagtcctgat gtccctagag       480
     gatgtgaagg gccatgcaaa gtccaac                                           507
//