ID   HQ597030; SV 1; linear; genomic DNA; STD; VRL; 536 BP.
XX
AC   HQ597030;
XX
DT   25-MAY-2011 (Rel. 108, Created)
DT   25-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Croton yellow vein virus isolate SILIGURI pre-coat protein (AV2) gene,
DE   complete cds; and coat protein (AV1) gene, partial cds.
XX
KW   .
XX
OS   Croton yellow vein virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-536
RA   Saha A., Saha B., Saha D.;
RT   "Molecular detection of begomoviruses infecting weeds of sub-Himalayan West
RT   Bengal, India";
RL   Unpublished.
XX
RN   [2]
RP   1-536
RA   Saha B., Saha A., Saha D.;
RT   ;
RL   Submitted (10-NOV-2010) to the INSDC.
RL   Department of Botany, University of North Bengal, Siliguri, West Bengal
RL   734013, India
XX
DR   MD5; e0f081858a9494a55ed95d682e1462f2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..536
FT                   /organism="Croton yellow vein virus"
FT                   /host="Croton bonplandianus Baill."
FT                   /isolate="SILIGURI"
FT                   /mol_type="genomic DNA"
FT                   /country="India:West Bengal: Siliguri"
FT                   /collected_by="Bikram Saha"
FT                   /collection_date="Aug-2010"
FT                   /PCR_primers="fwd_seq: taatattacckgwkgvccsc, rev_seq:
FT                   tggacyttrcawggbccttcaca"
FT                   /db_xref="taxon:671095"
FT   gene            154..510
FT                   /gene="AV2"
FT   CDS             154..510
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="pre-coat protein"
FT                   /note="structural protein"
FT                   /db_xref="GOA:E0WD86"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:E0WD86"
FT                   /protein_id="AEF38349.1"
FT                   /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYAPDTLGHDLIRDL
FT                   ISVIRARNYVEASSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKGMGEQTHVP
FT                   EAQDVQDVQKPRCP"
FT   gene            314..>536
FT                   /gene="AV1"
FT   CDS             314..>536
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="structural protein"
FT                   /db_xref="GOA:F6KSG2"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:F6KSG2"
FT                   /protein_id="AEF38350.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYVNRAAAPIVRVTKAKAWA
FT                   NRPMYRKPRMYRMYRSPDVPKGCEGPCKV"
XX
SQ   Sequence 536 BP; 155 A; 125 C; 124 G; 132 T; 0 other;
     taatattacc tgatggccgc gaaaaaaaaa gtggtgggcc ccacggcgca ctaactgata        60
     aagacatatc caccaatgaa aagagctcct cagagcttaa ttgttttgtg gtcccctatt       120
     taaacttcgc caccaagtag tgcattgcgc attatgtggg atccattagt aaacgagttt       180
     cccgaaaccg ttcatgggtt tagatgtatg ttagcagtta aatatctgca gttagtagag       240
     aaaacttatg ctcctgacac attgggtcac gatttaatta gggatttaat ttcagtaatt       300
     agggctagaa attatgtcga agcgtccagc agatataatc atttccacgc ccgcttcgaa       360
     ggtacgccgt cgtctcaact tcgacagccc atatgtgaac cgtgctgctg cccccattgt       420
     ccgcgtcacc aaagcaaagg catgggcgaa cagacccatg taccggaagc ccaggatgta       480
     caggatgtac agaagcccag atgtccctaa gggatgtgaa gggccatgca aagtcc           536
//