ID   HQ597029; SV 1; linear; genomic DNA; STD; VRL; 495 BP.
XX
AC   HQ597029;
XX
DT   25-MAY-2011 (Rel. 108, Created)
DT   25-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Jatropha mosaic India virus isolate SILIGU-1 pre-coat protein (AV2) gene,
DE   complete cds; and coat protein (AV1) gene, partial cds.
XX
KW   .
XX
OS   Jatropha mosaic India virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-495
RA   Saha A., Saha B., Saha D.;
RT   "Molecular detection of begomoviruses infecting Jatropha curcas L. in
RT   sub-Himalayan west Bengal, India";
RL   Unpublished.
XX
RN   [2]
RP   1-495
RA   Saha B., Saha A., Saha D.;
RT   ;
RL   Submitted (10-NOV-2010) to the INSDC.
RL   Department of Botany, University of North Bengal, Siliguri, West Bengal
RL   734013, India
XX
DR   MD5; f7715734f29b09e77439fa0b0e6095fc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..495
FT                   /organism="Jatropha mosaic India virus"
FT                   /segment="DNA-A"
FT                   /host="Jatropha curcas L."
FT                   /isolate="SILIGU-1"
FT                   /mol_type="genomic DNA"
FT                   /country="India:West Bengal: Siliguri"
FT                   /collected_by="Bikram Saha"
FT                   /collection_date="Jun-2009"
FT                   /PCR_primers="fwd_seq: taatattacckgwkgvccsc, rev_seq:
FT                   tggacyttrcawggbccttcaca"
FT                   /db_xref="taxon:1034067"
FT   gene            112..468
FT                   /gene="AV2"
FT   CDS             112..468
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="pre-coat protein"
FT                   /note="structural protein"
FT                   /db_xref="GOA:F6KSF9"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:F6KSF9"
FT                   /protein_id="AEF38347.1"
FT                   /translation="MWDPLLNEFPDSVHGFRCMLALKYLQLVESTYSPDTLGYDLIRDL
FT                   ILVIRARSYAEATRRYHHFNSRLEGTSPSDLRQPVQQPCFCLHCPRHQKTSLDKQAHES
FT                   EAQMVQDVQKPRCS"
FT   gene            272..>495
FT                   /gene="AV1"
FT   CDS             272..>495
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="structural protein"
FT                   /db_xref="GOA:F6KSG0"
FT                   /db_xref="UniProtKB/TrEMBL:F6KSG0"
FT                   /protein_id="AEF38348.1"
FT                   /translation="MPKRPGDIIISTPASKVRRRLIFDSPYSNRASVFTVRVTKRQAWT
FT                   NRPMNRKPRWYRMFRSPDVPRGCEGPCKV"
XX
SQ   Sequence 495 BP; 119 A; 136 C; 118 G; 122 T; 0 other;
     tgtggtccct caccccacgt ggagttgtcg cccactcaga acgcgcactc aacgcttgaa        60
     taattgtggt ccccgttata agtacttcgt gagcaagtta atacttgcaa catgtgggat       120
     ccactactta acgagtttcc agactccgtt cacggtttcc gttgtatgct agcgctgaag       180
     tatcttcagc ttgtcgaaag tacttattcc cctgatacgc tcgggtacga tctaatccgg       240
     gacctgattt tggttatcag ggccagaagc tatgccgaag cgaccaggag atatcatcat       300
     ttcaactccc gcctcgaagg tacgtcgccg tctgatcttc gacagcccgt acagcaaccg       360
     tgcttctgtc ttcactgtcc gcgtcaccaa aagacaagcc tggacaaaca ggcccatgaa       420
     tcggaagccc agatggtaca ggatgttcag aagcccagat gttcctaggg gatgtgaagg       480
     cccatgtaag gtcca                                                        495
//