ID   HQ593626; SV 1; linear; genomic RNA; STD; VRL; 609 BP.
XX
AC   HQ593626;
XX
DT   20-FEB-2011 (Rel. 107, Created)
DT   05-JUN-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Tomato mosaic virus strain T16 coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Tomato mosaic virus
OC   Viruses; Riboviria; Virgaviridae; Tobamovirus.
XX
RN   [1]
RP   1-609
RA   Aghamohammadi V., Rakhshandehroo F.;
RT   ;
RL   Submitted (03-NOV-2010) to the INSDC.
RL   Plant Pathology, College of Agriculture and Natural Resources, Science and
RL   Research Branch, Islamic Azad University, Hesarak Avenue, Tehran 14515-775,
RL   Iran
XX
DR   MD5; 1560ef050c47696ae7bbb358436a1dc3.
DR   EuropePMC; PMC4174800; 25288953.
DR   RFAM; RF01115; TMV_UPD-PK2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..609
FT                   /organism="Tomato mosaic virus"
FT                   /host="tomato"
FT                   /strain="T16"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /collected_by="V. Aghamohammadi"
FT                   /collection_date="10-Aug-2009"
FT                   /PCR_primers="fwd_name: ToMV spec, fwd_seq:
FT                   cggaaggcctaaaccaaaaag, rev_name: Tob-Uni 1, rev_seq:
FT                   atttaagtggasggaaaavcact"
FT                   /note="acronym: ToMV"
FT                   /db_xref="taxon:12253"
FT   gene            56..535
FT                   /gene="CP"
FT   CDS             56..535
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q780A8"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="UniProtKB/TrEMBL:Q780A8"
FT                   /protein_id="ADX62316.1"
FT                   /translation="MSYSITSPSQFVFLSSVWADPIELLNVCTNSLGNQFQTQQARTTV
FT                   QQQFSEVWKPFPQSTVRFPGDVYKVYRYNAVLDPLITALLGAFDTRNRIIEVENQQSPT
FT                   TAETLDATRRVDDATVAIRSAINNLVNELVRGTGLYNQNTFESMSGLVWTSAPAS"
XX
SQ   Sequence 609 BP; 174 A; 115 C; 137 G; 182 T; 1 other;
     atatttgatt gagatgagcc gagacgtcgg tcgcggattc tgattcgtat taaatatgtc        60
     ttactcaatc acttctccat cgcaatttgt gtttttgtca tctgtatggg ctgaccctat       120
     agaattgtta aacgtttgta caaattcgtt aggtaaccag tttcaaacac agcaagcaag       180
     aactactgtt caacagcagt tcagcgaggt gtggaaacct ttccctcaga gcaccgtcag       240
     atttcctggc gatgtttata aggtgtacag gtacaatgca gttttagatc ctctaattac       300
     tgcgttgctg ggggctttcg atactaggaa tagaataatc gaagtagaaa accagcagag       360
     tccgacaaca gctgaaacgt tagatgctac ccgcagggta gacgacgcta cggttgcaat       420
     tcggtctgct ataaataatt tagttaatga actagtaaga ggtactggac tgtacaatca       480
     gaatactttt gaaagtatgt ctgggttggt ctggacctct gcacctgcat cttaaatgca       540
     taggtgctga aatataaagt ttgtgtttct aaaacacacg tggtacgtac gataacgtac       600
     agtgntttt                                                               609
//