ID   HQ593616; SV 1; linear; mRNA; STD; VRL; 683 BP.
XX
AC   HQ593616;
XX
DT   20-FEB-2011 (Rel. 107, Created)
DT   21-AUG-2012 (Rel. 113, Last updated, Version 4)
XX
DE   Tomato mosaic virus isolate TMV-Jahrum coat protein (CP) mRNA, complete
DE   cds.
XX
KW   .
XX
OS   Tomato mosaic virus
OC   Viruses; Riboviria; Virgaviridae; Tobamovirus.
XX
RN   [1]
RP   1-683
RA   Alishiri A., Rakhshandehroo F.;
RT   ;
RL   Submitted (02-NOV-2010) to the INSDC.
RL   Plant Pathology, College of Agriculture and Natural Resources, Science and
RL   Research Branch, Islamic Azad University, Pounak Square- Simun Bulivar
RL   Street-Hesarak Avenue, Tehran 14515-775, Iran
XX
DR   MD5; 741aabe1882447b5dfa798a0fe0c7993.
DR   EuropePMC; PMC4691660; 26701086.
DR   EuropePMC; PMC5282660; 28137291.
DR   RFAM; RF01115; TMV_UPD-PK2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..683
FT                   /organism="Tomato mosaic virus"
FT                   /host="Chenopodium murale (nettle-leaf goosefoot weed)"
FT                   /isolate="TMV-Jahrum"
FT                   /mol_type="mRNA"
FT                   /country="Iran"
FT                   /collected_by="A. Alishiri"
FT                   /collection_date="10-Sep-2009"
FT                   /identified_by="A. Alishiri"
FT                   /PCR_primers="fwd_name: TMV spec, fwd_seq:
FT                   cggtcagtgccgaacaagaa, rev_name: Tob-Uni 1, rev_seq:
FT                   atttaagtggasggaaaavcact"
FT                   /note="acronym: TMV"
FT                   /db_xref="taxon:12253"
FT   gene            1..683
FT                   /gene="CP"
FT   CDS             135..614
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F1CWF8"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="UniProtKB/TrEMBL:F1CWF8"
FT                   /protein_id="ADX62306.1"
FT                   /translation="MSYAITSPSQFVFLSSAWADPVELINICTNSLGNQFQTQQARTTV
FT                   QQQFSEVWKPFPQSTVRFPDNVFKVYRYNAVIDPLITALLGTFDTRNRIIEVENQQSPT
FT                   TAETLDATRRVDDATVAIRSAVNNLVNELVRGTGFYNQSTFESMSGLAWTSAPAS"
XX
SQ   Sequence 683 BP; 214 A; 122 C; 158 G; 189 T; 0 other;
     actaatgaaa gaaaagggcg gtctaatttc cgtaagaaac aagaccagga gagttatgga        60
     gttagtgata gtttagataa tttgattgaa gatgataccg agacgtcagt cgcgggatct       120
     gattcgtatt aaatatgtct tacgctatta cttctccgtc acaattcgtg tttttatcat       180
     cagcatgggc cgaccctgta gaattaataa atatttgtac taattcgtta ggtaaccagt       240
     ttcaaacaca acaagcaagg actactgttc aacagcagtt cagcgaggtg tggaaacctt       300
     tccctcaaag tactgtcagg ttccctgaca atgtatttaa ggtgtatagg tataatgcgg       360
     ttatagatcc tctaattact gcattgctgg gaactttcga tactagaaat agaataatag       420
     aggtagaaaa tcagcaaagc ccgactacag ccgaaacatt ggatgccact cgcagagtgg       480
     acgatgctac ggttgcgatc aggtccgctg ttaataattt agttaatgaa ttggtaagag       540
     gaacaggttt ctacaaccag agtactttcg aaagtatgtc tgggttggcc tggacttctg       600
     cgccagcgtc ctaagtaata aagggcgaaa attaaaggaa gtgtatcctt aaatacacgt       660
     ggtgcgtacg ataacgtaca gtg                                               683
//