ID HQ593110; SV 1; circular; genomic DNA; STD; VRL; 7532 BP. XX AC HQ593110; XX DT 04-MAY-2011 (Rel. 108, Created) DT 04-MAY-2011 (Rel. 108, Last updated, Version 1) XX DE Banana streak UM virus, complete genome. XX KW . XX OS Banana streak UM virus OC Viruses; Ortervirales; Caulimoviridae; Badnavirus. XX RN [1] RP 1-7532 RA James A.P., Geijskes R.J., Dale J.L., Harding R.M.; RT "Molecular characterisation of six badnavirus species associated with leaf RT streak disease of banana in East Africa"; RL Ann. Appl. Biol. 158(3):346-353(2011). XX RN [2] RP 1-7532 RA James A.P., Geijskes R.J., Dale J.L., Harding R.M.; RT ; RL Submitted (07-NOV-2010) to the INSDC. RL Centre for Tropical Crops and Biocommodities, Queensland University of RL Technology, 2 George St, Brisbane, Queensland 4001, Australia XX DR MD5; 4b6a212b901946ed95d2d4a33c438870. XX FH Key Location/Qualifiers FH FT source 1..7532 FT /organism="Banana streak UM virus" FT /host="Musa sp. cv. Mbwazirume" FT /mol_type="genomic DNA" FT /country="Uganda" FT /collection_date="Apr-2008" FT /db_xref="taxon:1016857" FT CDS 622..1185 FT /codon_start=1 FT /product="hypothetical protein" FT /note="ORF I protein" FT /db_xref="InterPro:IPR010746" FT /db_xref="UniProtKB/TrEMBL:F5AY25" FT /protein_id="AEC49882.1" FT /translation="MTSEQEWEQKFAAWKDSHTGLEAEKSLITGSKIKNSDLNHNIRIT FT CYRSDLGYKVLLTSQEKARAHRSELFSLLREHNLAHNKNLKEVAAKAEEALKISRAQRS FT EIKNLKAKLDVISDELQALRKDYLERRPLNKKDVEQLVLQITEQPKFIEKQTEALLEDV FT SKLVVSVRQEVNTVQHMLKVMRGE" FT CDS 1182..1493 FT /codon_start=1 FT /product="virion associated protein" FT /note="ORF II protein" FT /db_xref="UniProtKB/TrEMBL:F5AY26" FT /protein_id="AEC49883.1" FT /translation="MTSDNNEYRRPWQTKNIYGSDSEGFLSSAGTQASTTKQLNTIIQL FT LIQVHVRISALEEELEVIKTKGYSSDLEDIQEKLSNLRIGTSTSKQETKGTLKVLKKF" FT CDS 1497..7043 FT /codon_start=1 FT /product="polyprotein" FT /note="encodes movement protein, coat protein, aspartic FT protease, reverse transcriptase and RNase H; ORF III" FT /db_xref="GOA:F5AY27" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR001878" FT /db_xref="InterPro:IPR001969" FT /db_xref="InterPro:IPR001995" FT /db_xref="InterPro:IPR018061" FT /db_xref="InterPro:IPR021109" FT /db_xref="InterPro:IPR036875" FT /db_xref="InterPro:IPR041373" FT /db_xref="UniProtKB/TrEMBL:F5AY27" FT /protein_id="AEC49884.1" FT /translation="MALRGRRLGTGSTTVLEDGTVLSDQIRNYRNGQRALYEAQNIVAR FT PNAIFKRIFGGSETEKTLEMVMDVEAELEKSMKRRARAFPAEVVYSPRRDNKLHKVFQG FT RASQDLMVVDDNQMDMTFIKEETFEQLERAGLRYIHIGALQVRIQPLHQRWSGKMAFLA FT FQDTRSQPATIIAAMEVDLSKGAQMIYITPDFMTTIGDFYQGIQLSIKTKGYNNWRGEA FT NLHLERMVTARLSSTSNTGFEIKIDKVIQYMKTNGIQAIEATKQSVKKYQGQDWNIRPA FT KVEVAMKPTAMEVKNEYDNSMTFSFHKYQATSSTPAPQYNSEDEIQLEEEVRMAICSDD FT ESEEPSTSAIQEIEEFLAALSPREEGSESVSTARCKNKLEEEEEIINDFLKISEESVRM FT AEEEETDYPAIKRLEELLQQEQVKMSEVSSSSALIPADVDMEGNLPGYAPAQTKAGYSD FT YNPGETRFGGYSRKWSNPINNWSLPVANAATGSMLVLSIGKNSEIFERWESTTLNYMAS FT QNIIGAEEKISRIENLLGETEKKIFIGWRTQYTTEFEILKTQAIGTNGTQNVISQIRRI FT LLGDSPKQGTTLTQDAAYKRIKSLVCDKFTYPDIMRYMVGYLHLAARTGRMWISKELSD FT EFFLKLPSEIGDQARKAFDAKFPGTHIHVPARIDFTYNYLEEVCTENNRQRKLAKLDFC FT RGFPVINPLQRKYRSLGTRRTRTYKGKPHSSHARIDKRKYLQGRKKECRCYVCGEEGHF FT AKECKSKKKIQERVNIVNELDIPEGYDIVSVGYDEKSLSDIFSISEGEDNQAHLRDEEG FT LPEVPTTWDQWDEYYKKEFIYMADTKEVLSEEENENGPWLVGQPGGFEKQMYVTKKQYH FT CEGHEWFHNQPKVRSCQRCFGKFTKGQYVICGKCKVRVCHLCIQYCYGFSITKEEIPKE FT EENWKELASTLMIENRKLKLEKKLLLKELNDQIEANKKIKEEFPVIEETNSDAAIEIEM FT LQELLNEANKSNNQLRKRIAELEGASTSIILTAQEQYNETVLVTQRKDCMYRFDVFVEV FT EGKKEKLKALLDTGATKSCISERYIPKEFLTDSKFTVNIAGVNSMTRVTKQLKEAKLWI FT KETFFSLPITYVGNLDLGTNTQMIIGCNFIQSLKGAVRLEGRSVTFYKLVSTIEADEYI FT RRAEEQICIAHDPASFVQETFMKKNMKIINDMKELGFIGEEPLKHWANNKIKCHIRIRN FT PELTIQDKPHKFVTPQMKEQMQFHMNELLKRKVIRPSTSRHRTNAFIVNSGTTVDPITR FT KETKGKPRLVFNYKRLNDNTEKDQYSLPGINSLLNSVGNAKIYSKFDLKSGFHQVAMEE FT ESIEWTAFWAFTGLYEWLVMPFGLKNAPAIFQRKMDNCFRGTEAFIAVYIDDILIFSKD FT PEEHAKHLEEMLRICKANGLILSPTKYKIGVKVVDFLGSTIGENQLHLQPHIVQKIIDF FT DEEKLKTKKGLKSWLAILNYARGHIKNMGRILGPLYPKTSEKGERRLNSEDWKIIRGMK FT QEVKNLPKLAIPPENAYIVIETDGSMNGWGGVCLWKKSKNDPKSTEQICRYASGKFAKP FT KSTIEAEISGVLCSLEKFRLYYLDKAEITVRTDSGAIERFYNKSTEHKPSEVRWLKFMD FT FISGAGPEIKFEHIKGKDNTLADLLSRLNAALKAEPTQELITLAKALKEIEYDEDNPVF FT KKIKEYSEKIKWPEYKKLEVVCMAQTADEVSPLLCNCEQPAGRQMSKTSRNPGRWFWSC FT VQRKCHAWWWDDHLEDYIETQVELRLAKIFKEQGTQEYEESMEKLVIKDNSPLPYQENP FT EDAYQADFIQEDYQPEDVLDLDDFTNDDQWRRS" XX SQ Sequence 7532 BP; 2724 A; 1466 C; 1730 G; 1612 T; 0 other; tggtatcaga gcaggttagt atctatggct ttcatggggt aaaaccctta gataagggcc 60 aaagggctct gtagttttat ggaaaggaca actgtttgag caaataacta gtctgataag 120 tcgaaaggtt gtaaatttag aattcattga taaacgtagg atacctgtct tctacccata 180 tgccctagct cattgataag ctggaaggtg aacctaggat actcgacatt gatcttagct 240 tgttcgtaag gaaaactcac aggatgtcag taggcttaaa gaccggagta cccgtcaggc 300 aggaggccgt ccaggggaaa gatggttgcg gcttatgaca aaactgtgta tgatatacac 360 cttaccatgg caagtggtgt ttacacttaa gatcagaaga ggagcctagt agtagtcatc 420 aagtataatc aaggagttag ctttcgggat ttcagggagc ctgctagtaa tcacaaaatt 480 ctagactata ccacctgtaa gacgtaaaga ctatagttat cactggatct ggacagaagt 540 ctgaacctag aactacaacc cagagggtac ccttatctat cttttacata agaaagcacc 600 taaggatact atagctctta tatgacctcg gaacaagagt gggaacaaaa gtttgctgct 660 tggaaagatt cacacactgg tctagaagca gaaaaatcgc taatcactgg tagtaagata 720 aaaaactcag atctgaacca taatattcgc atcacttgtt atcgttcaga ccttgggtac 780 aaggtattgc taacctcgca ggaaaaggcc agagcccata gaagtgagct gttctctttg 840 ctaagagagc acaaccttgc gcacaacaaa aacctgaagg aggtagctgc aaaagcagag 900 gaggctttaa aaatatccag agcccaacgc tctgagatca agaatcttaa ggcaaaattg 960 gacgtcattt ctgacgagct gcaagctctc aggaaagact atctggagag aagacccttg 1020 aataagaagg acgtcgagca gctggtcctg cagatcactg aacaaccaaa gttcattgag 1080 aagcagacag aggccctgct agaagacgta tccaaactgg tggtctcagt tcgtcaagaa 1140 gtcaacacag tgcaacacat gctgaaggtc atgagaggag aatgacctct gacaacaacg 1200 agtataggag gccttggcaa accaaaaata tatacggatc agattccgaa ggctttctat 1260 ccagcgcagg aactcaggca agcaccacca aacagctgaa cactatcatt cagctactta 1320 tccaagtgca tgtcaggata agcgcccttg aggaagaatt ggaagtcatc aaaacaaaag 1380 gatactcctc tgatcttgag gatatccagg agaagctatc caacctcaga ataggcacat 1440 caacctcaaa gcaggaaaca aaagggaccc tcaaagtcct aaagaaattt tagaaaatgg 1500 ccctaagagg aagaagactc ggtactggtt ccacaacagt actagaagat ggaactgtac 1560 tatctgacca aatcagaaac tacaggaatg ggcaaagagc cctgtatgaa gctcaaaata 1620 tagtggcccg accaaatgct atatttaaaa gaatatttgg tggaagtgag actgaaaaaa 1680 ctctagaaat ggtcatggat gttgaagcag agctggagaa atcaatgaag agaagggcaa 1740 gagcattccc agcagaagtt gtctactctc caagaagaga caacaagctt cacaaggtct 1800 tccagggaag agcaagccaa gacttaatgg ttgttgatga caaccaaatg gatatgacat 1860 ttatcaagga agaaaccttt gagcagcttg aaagagcggg actcagatac atccacatag 1920 gggcactaca agtaagaata cagcccttgc atcaaagatg gtcaggaaaa atggcattcc 1980 tggcatttca agacacaaga agccagcctg ctactataat agcagcaatg gaagtggatc 2040 taagcaaagg agctcagatg atctatatta ccccggattt catgacaacg ataggggatt 2100 tctatcaagg aattcaactc tctatcaaga caaaagggta taataattgg aggggagaag 2160 caaatctcca cctagaaaga atggtcacgg caaggctgtc cagtacatca aatactggat 2220 ttgaaataaa aattgacaag gtcatccaat acatgaagac gaatggcata caagcaatag 2280 aagcaaccaa gcaatccgtg aaaaagtacc aaggccaaga ttggaatatc aggccagcaa 2340 aggtagaagt agcaatgaag ccaacagcaa tggaggtcaa aaatgagtat gacaactcga 2400 tgaccttctc atttcacaaa taccaagcta caagcagtac tccagcaccc cagtacaaca 2460 gtgaggatga aattcaactg gaagaagaag ttcgcatggc gatatgctca gatgacgaat 2520 ctgaggaacc ttcaacgtca gccatacaag aaatagaaga atttcttgcc gccctttccc 2580 cccgggagga gggtagtgaa agtgtctcta ccgcaaggtg taaaaacaaa ttggaagaag 2640 aagaggagat catcaatgat ttcctaaaaa tttcggagga atcagtaagg atggctgaag 2700 aagaagaaac agattatcca gccattaaaa gattggagga gctcttacaa caagagcagg 2760 tgaaaatgtc agaagtatca tcatcatcag cactcatacc agcagatgtt gatatggaag 2820 gaaatctccc agggtatgct ccagcgcaaa ccaaagcagg atattctgat tataacccag 2880 gggaaacaag atttggaggt tattcaagaa agtggagtaa cccaatcaat aactggagtc 2940 tcccagtagc caacgctgca acaggatcca tgctggtcct atcaatagga aagaattcag 3000 aaatatttga aagatgggaa tcaactaccc tgaactacat ggcatcacag aacatcatag 3060 gggcggaaga aaagatttcc agaattgaaa acttattggg agaaacagag aaaaagatct 3120 tcataggatg gagaactcag tacaccactg agtttgagat cttaaagacc caggcaatag 3180 gtacaaacgg gacacagaat gtgatctcgc agataaggag aattctactt ggcgacagcc 3240 caaagcaagg gacaactcta acccaagatg ctgcatacaa aaggatcaag tctctggtct 3300 gtgacaagtt cacttatcca gacattatga gatatatggt gggataccta cacctagcag 3360 caaggacagg aaggatgtgg atatcaaaag aactctctga cgaattcttc ttaaagcttc 3420 ctagcgaaat tggtgatcag gccagaaagg cctttgatgc aaaattccca ggtacacata 3480 ttcatgtccc cgcaagaatt gattttactt ataattacct ggaagaagtc tgcacggaaa 3540 acaacagaca aagaaagctt gccaaactag atttctgcag aggattccca gtaataaacc 3600 cgctacaaag gaaatacagg tcattaggaa caagaaggac aagaacctac aaaggaaagc 3660 ctcacagttc tcatgcaaga attgacaaaa ggaagtatct gcaaggaagg aagaaagaat 3720 gcagatgcta cgtatgcggt gaagaaggac attttgcaaa agagtgcaag tccaagaaga 3780 agatccaaga aagagtaaac atagtaaatg agttggatat cccagaagga tatgacatcg 3840 tatcagtagg atatgatgag aaaagcttaa gtgatatatt cagtatatca gaaggcgaag 3900 acaatcaggc ccatctcaga gatgaagaag gactgccgga agttcctaca acttgggatc 3960 aatgggatga atattacaaa aaggaattta tctatatggc agacacaaag gaagtcctct 4020 ctgaagagga aaatgagaat ggaccatggc tggtaggcca accaggaggt tttgagaaac 4080 aaatgtatgt gaccaagaag cagtatcact gtgaagggca tgaatggttt cataatcaac 4140 ccaaagtgag gtcatgccag aggtgttttg gcaaatttac gaaagggcaa tatgtgatct 4200 gcgggaaatg caaggtcaga gtatgccacc tctgcatcca atattgctat ggtttctcaa 4260 taactaagga ggaaatacca aaggaagaag aaaactggaa ggaattagct tcaacactaa 4320 tgatagaaaa caggaagcta aaattagaga aaaagctgct gttaaaggaa ctcaacgacc 4380 agattgaggc aaacaaaaaa atcaaagagg agttcccagt cattgaggaa acaaactcag 4440 atgcagcaat tgagattgag atgctccaag aactgctcaa tgaggcaaac aaaagcaaca 4500 accagctaag aaagaggata gctgagttag aaggtgcctc aacatcaatc atattaacgg 4560 cacaagaaca gtataatgaa acagtcttag tcacacaaag aaaagactgc atgtacagat 4620 ttgatgtctt cgtggaagtt gaaggcaaga aggagaagct aaaggcgtta ctagatactg 4680 gagcaacaaa atcctgcata agcgaaaggt atatccctaa agaattttta actgactcaa 4740 aattcacagt caatattgca ggagtaaatt ctatgaccag ggtaacaaag cagctgaaag 4800 aagctaagtt gtggatcaag gaaactttct tctccttgcc cataacatat gttggcaact 4860 tagatctggg gaccaatacc cagatgatta taggatgtaa tttcatccaa tcactcaaag 4920 gagctgtaag attagaaggc agaagtgtga ccttctacaa actggtctca acaatcgagg 4980 cagatgagta tataaggaga gcagaagagc agatttgcat tgctcatgat ccagcttcat 5040 ttgtgcaaga aacattcatg aagaagaata tgaagatcat aaatgatatg aaggaattgg 5100 gattcatagg ggaagaacca ttgaagcatt gggcaaataa caaaatcaag tgtcacatca 5160 ggatcaggaa cccagaacta acgatccagg ataagcccca caagtttgta acccctcaaa 5220 tgaaggaaca gatgcagttc cacatgaatg aactattgaa gaggaaggtt atccggccat 5280 ctacaagtcg gcacaggact aatgccttca tagttaattc aggaacaaca gtggacccaa 5340 tcacaaggaa agagacaaaa ggaaaaccaa gactggtctt caattacaag agattaaatg 5400 acaacacaga gaaggatcag tattccctgc caggaatcaa cagcctacta aactcagttg 5460 gtaatgcgaa aatctactca aaattcgacc tgaagagtgg atttcatcaa gtggcaatgg 5520 aggaagaatc tattgaatgg acggcctttt gggccttcac aggactatat gaatggctgg 5580 tgatgccatt tggactcaaa aatgctccag caatattcca gcgcaagatg gataattgtt 5640 tcagaggaac agaggcattc atagcagtat acatagatga catactgata ttctcaaagg 5700 acccagaaga acatgcaaaa cacctggaag aaatgctcag gatttgcaag gcaaatgggc 5760 tcattctcag ccctacaaaa tacaagatcg gagtaaaggt agtagacttc cttggaagta 5820 ctattggaga aaaccaacta catctgcaac cacacatagt ccagaagatc atagactttg 5880 atgaagaaaa gctgaaaacg aagaaaggac taaaatcatg gctggcaata ttaaactatg 5940 ccagaggaca catcaagaat atgggaagga ttttgggacc gctgtatccc aaaacatcag 6000 aaaaaggaga aagaaggcta aattctgaag attggaagat aatcagagga atgaagcaag 6060 aggtaaaaaa tctaccaaaa cttgcaatac cccctgaaaa tgcctacata gtcattgaaa 6120 cagatggctc aatgaacgga tggggaggag tttgcctgtg gaaaaagagc aaaaatgacc 6180 caaaatccac agaacagatc tgtcgctatg ctagtggaaa atttgcaaaa cccaaatcca 6240 ctattgaggc agaaatctca ggagttctat gcagcctgga aaaattcaga ctatactacc 6300 tggataaagc agaaatcact gtcagaacag acagcggtgc gattgagcgg ttctataata 6360 aaagcaccga gcacaagcct tcagaagtaa gatggttaaa attcatggat ttcatttcag 6420 gagcaggccc ggagatcaaa ttcgagcaca ttaaagggaa agacaacacc ttagcagatt 6480 tgttgtccag gttaaatgca gcacttaagg cggagccaac ccaagaatta ataaccttag 6540 caaaagctct gaaggagatt gaatatgatg aagacaaccc ggttttcaag aaaatcaaag 6600 aatattcaga aaagatcaaa tggcctgaat ataaaaaatt agaagtagtc tgcatggctc 6660 agacagcaga tgaagtatct ccactactat gcaactgtga acagcctgct ggaaggcaaa 6720 tgtccaagac aagcaggaat ccagggagat ggttctggtc gtgtgtacaa cgcaagtgtc 6780 atgcttggtg gtgggatgac cacctagaag attacattga aacacaggtt gagcttaggc 6840 tcgccaagat tttcaaggaa caaggaaccc aggagtatga agaaagcatg gagaaactag 6900 tcatcaagga caactcccct ctgccatatc aggagaatcc agaagatgcg tatcaagcag 6960 atttcataca ggaggactac cagccagagg atgtactgga cctagatgac tttaccaacg 7020 acgaccagtg gagacggtcg taagcaatga cgaggaagcg caccatggac ggcactaacc 7080 caggtgacag ctttacgaga tgcctccacc aaccggtagg taaggtggat agtacaataa 7140 tgagtcttgt ggatctgcga atccacttta aaaaggcctg cgtgcctttg aagcaaaggt 7200 ttaggtgcga agctgagtca cgcacaataa ctttatgtct gtaaagcaaa agtttaggtg 7260 cgatgcggtg tcacgcacaa taactttatg cctagtgaca gccacgttgc ctgcccaagt 7320 tgcctgcgtg catcaaggga tgtgagctcg gctatatata ggtcacttgt aagctcttac 7380 aagcatcgag cccggtagca tctaccacca ctcttatgct tatttgagca ttgaggcaat 7440 aaacactcag tttttccgca caagtttccc aagttcttta gtagttgcaa tcgagacgaa 7500 caaggcttga aggagcacga tcccgtcgac cc 7532 //