ID   HQ589261; SV 1; linear; genomic RNA; STD; VRL; 1053 BP.
XX
AC   HQ589261;
XX
DT   13-JAN-2011 (Rel. 107, Created)
DT   13-JAN-2011 (Rel. 107, Last updated, Version 1)
XX
DE   Turnip crinkle virus strain M 38 kDa protein gene, partial cds.
XX
KW   .
XX
OS   Turnip crinkle virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Betacarmovirus.
XX
RN   [1]
RP   1-1053
RA   Bakker S.E., Pearson A.R., Stockley P.G., Ranson N.A.;
RT   "Structural and Functional Studies of the Turnip Crinkle Virus Virion
RT   Reveals the Mechanism of Genome Uncoating";
RL   Unpublished.
XX
RN   [2]
RP   1-1053
RA   Bakker S.E., Pearson A.R., Stockley P.G., Ranson N.A.;
RT   ;
RL   Submitted (08-NOV-2010) to the INSDC.
RL   Astbury Centre for Structural Molecular Biology, University of Leeds,
RL   Clarendon Road, Leeds, W. Yorkshire LS2 9JT, UK
XX
DR   MD5; 4bd520c9fd7fd1f6b03a018826b95dfb.
DR   EuropePMC; PMC4330335; 22306464.
DR   EuropePMC; PMC4689853; 26734041.
DR   EuropePMC; PMC5393175; 28148824.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1053
FT                   /organism="Turnip crinkle virus"
FT                   /strain="M"
FT                   /mol_type="genomic RNA"
FT                   /PCR_primers="fwd_name: Forward I, fwd_seq:
FT                   cctgaaatcaaaccgattcacacatcc, rev_name: Reverse II, rev_seq:
FT                   ccctaacacaggtcaaaataaagcg"
FT                   /db_xref="taxon:11988"
FT   CDS             1..>1053
FT                   /codon_start=1
FT                   /product="38 kDa protein"
FT                   /note="coat protein"
FT                   /db_xref="GOA:E7E1K6"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:E7E1K6"
FT                   /protein_id="ADT78694.1"
FT                   /translation="MENDPRVRKFASDGAQWAIKWQKKGWSTLTSRQKQTARAAMGIKL
FT                   SPVAQPVQKVTRLSAPVALAYREVTTQPRVSTARDGITRSGSELITTLKKNTDTEPKYT
FT                   TAVLNPSEPGTFNQLIKEAAQYEKYRFTSLRFRYSPMSPSTTGGKVALAFDRDAAKPPP
FT                   NDLASLYNIEGCVSSVPWTGFILTVPTDSTDRFVADGISDPKLVDFGKLIMATYGQGAN
FT                   DAAQLGEVRVEYTVQLKNRTGSTSDAQIGDFAGVKDGPRLVSWSKTKGTAGWEHDCHFL
FT                   GTGNFSLTLFYEKAPVSGLENADASDFSVLGEAAAGSVQWAGVKVAERGQGVKMVTTEE
FT                   QPKGKWQALRI"
XX
SQ   Sequence 1053 BP; 276 A; 287 C; 292 G; 198 T; 0 other;
     atggaaaatg atcctagagt ccggaagttc gcatctgatg gcgcccaatg ggcgataaag        60
     tggcagaaga agggctggtc aaccctaacc agcagacaga aacagaccgc ccgcgcagcg       120
     atggggatca agctctctcc tgtggcgcaa cctgtgcaga aagtgactcg actgagtgct       180
     ccggtggccc ttgcctaccg cgaggttacc acccagcctc gggtctctac tgccagggac       240
     ggcataacca gaagcggttc tgaactgatc acaaccttga agaagaacac tgacactgaa       300
     cctaagtaca ccacagctgt gcttaaccca agcgaacccg gaacattcaa ccagctcatt       360
     aaggaggcgg cccagtatga aaaataccga ttcacgtcac tcagatttag gtactccccc       420
     atgagccctt caaccaccgg aggcaaggtg gctctggcat tcgatcgaga tgccgccaaa       480
     cctccgccca acgacctcgc ttccctctac aacatagagg gttgtgtatc tagcgtgccc       540
     tggacagggt ttattttgac cgtcccaaca gattctactg accgctttgt ggcggatggt       600
     atcagcgatc caaagcttgt cgatttcggc aagctcatca tggccaccta cggccaagga       660
     gccaatgatg ccgcccaact cggtgaagtg cgagtcgagt acaccgtgca gctcaagaac       720
     agaactggct caaccagcga cgcccagatt ggggacttcg caggtgttaa ggacggaccc       780
     aggctggttt catggtccaa gaccaagggg acagctgggt gggagcacga ttgtcatttt       840
     ctcggaaccg gaaacttctc gttgacattg ttctacgaga aggcgccggt ctcggggcta       900
     gaaaacgcag acgcctctga cttctcggtc ctgggagaag ccgcagcagg tagtgtccaa       960
     tgggcaggag tgaaggtagc agaaagggga caaggcgtga aaatggtcac aactgaggag      1020
     cagccaaagg gtaaatggca agcactcaga att                                   1053
//