Dbfetch

Dbfetch

ID   HQ543100; SV 1; linear; genomic RNA; STD; VRL; 564 BP.
XX
AC   HQ543100;
XX
DT   13-JUN-2011 (Rel. 109, Created)
DT   28-JAN-2013 (Rel. 115, Last updated, Version 2)
XX
DE   Beet western yellows virus isolate 40bCP coat protein gene, partial cds;
DE   and movement protein gene, complete cds.
XX
KW   .
XX
OS   Beet western yellows virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-564
RA   Dann A.L., Wilson C.R.;
RT   "Molecular survey of Poleroviruses (Luteoviridae) infecting peas (Pisum
RT   sativum L.) and broccoli (Brassica oleracea var. italica) in Tasmania";
RL   Unpublished.
XX
RN   [2]
RP   1-564
RA   Dann A.L., Wilson C.R.;
RT   ;
RL   Submitted (05-NOV-2010) to the INSDC.
RL   Tasmanian Institute of Agricultural Research, University of Tasmania, 13 St
RL   Johns Avenue, New Town, Tasmania 7008, Australia
XX
DR   MD5; 6bfabad8179bada442aa5886cf060ae3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..564
FT                   /organism="Beet western yellows virus"
FT                   /host="Brassica oleracea var. italica"
FT                   /isolate="40bCP"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collected_by="Susan Lambert"
FT                   /collection_date="21-Apr-2010"
FT                   /db_xref="taxon:12042"
FT   CDS             1..>564
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="P3"
FT                   /db_xref="GOA:F8S803"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:F8S803"
FT                   /protein_id="AEH27595.1"
FT                   /translation="MNTVVGRRTINGRSRPRRQARRAQRSQPVVVVQTSRTTQRRPRRR
FT                   RRGNNRTRGAVSTRGASSSETFVFSKDNLAGSSSGAITFGPSLSNCPAFSNGILKAYHE
FT                   YKISMVILEFVSEASSQNSGSIAYELDPHCKLNSLSSTINKFGITKPGRRAFTASYING
FT                   TEWHDVAEDQFRILYKGNGSSSIAG"
FT   CDS             32..559
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="P4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:F8S804"
FT                   /protein_id="AEH27596.1"
FT                   /translation="MGEADHAGKHDALSALSQWLWSKPLGQHNADLDDDEEVITGQEEL
FT                   FLPEEQAQARHLFSRKTISREVPAEQSRSGRVYQTAQHSLMEYSRPTMSIKSRWSFWSS
FT                   SPKPLPKTPVPSLTSWTHTVNSTPFPQLSTNSGSQSPGGGRLQRLTSTGRNGTTLPRTN
FT                   SGSSTKAMVLHR"
XX
SQ   Sequence 564 BP; 159 A; 152 C; 139 G; 114 T; 0 other;
     atgaatacgg tcgtgggtag gagaacaatc aatgggagaa gccgaccacg caggcaagca        60
     cgacgcgctc agcgctctca gccagtggtt gtggtccaaa cctctcggac aacacaacgc       120
     cgacctagac gacgacgaag aggtaataac cggacaagag gagctgtttc taccagagga       180
     gcaagctcaa gcgagacatt tgttttctcg aaagacaatc tcgcgggaag ttccagcgga       240
     gcaatcacgt tcgggccgag tctatcaaac tgcccagcat tctctaatgg aatactcaag       300
     gcctaccatg agtataaaat ctcgatggtc attttggagt tcgtctccga agcctcttcc       360
     caaaactccg gttccatcgc ttacgagctg gacccacact gtaaactcaa ctccctttcc       420
     tcaactatca acaaattcgg gatcacaaag cccgggagga gggcgtttac agcgtcttac       480
     atcaacggga cggaatggca cgacgttgcc gaggaccaat tcaggatcct ctacaaaggc       540
     aatggttctt catcgatagc tgga                                              564
//