ID   HQ541329; SV 1; linear; genomic RNA; STD; VRL; 2033 BP.
XX
AC   HQ541329;
XX
DT   17-JAN-2011 (Rel. 107, Created)
DT   13-DEC-2011 (Rel. 111, Last updated, Version 3)
XX
DE   Heterobasidion RNA virus 1 isolate HetRV1-pa1 putative RNA-dependent RNA
DE   polymerase gene, complete cds.
XX
KW   .
XX
OS   Heterobasidion partitivirus 1
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-2033
RX   PUBMED; 22115442.
RA   Vainio E.J., Hakanpaa J., Dai Y.C., Hansen E., Korhonen K., Hantula J.;
RT   "Species of Heterobasidion host a diverse pool of partitiviruses with
RT   global distribution and interspecies transmission";
RL   Fungal Biol 115(12):1234-1243(2011).
XX
RN   [2]
RP   1-2033
RA   Vainio E.J.;
RT   ;
RL   Submitted (04-NOV-2010) to the INSDC.
RL   Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1 POB
RL   18, Vantaa 01301, Finland
XX
DR   MD5; 3529d112da4acdc0d108fb9fd62a0ce7.
DR   EuropePMC; PMC6443826; 30972301.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2033
FT                   /organism="Heterobasidion partitivirus 1"
FT                   /host="Heterobasidion parviporum"
FT                   /isolate="HetRV1-pa1"
FT                   /mol_type="genomic RNA"
FT                   /country="Bhutan"
FT                   /isolation_source="Pinus wallichiana"
FT                   /collected_by="T. Kirisits"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:942041"
FT   CDS             96..1955
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:E7E1F4"
FT                   /db_xref="UniProtKB/TrEMBL:E7E1F4"
FT                   /protein_id="ADV15447.1"
FT                   /translation="MEYLTSLFSRVLNITSQVTNFKLVDTTEYGPSIPYINEVAVENHK
FT                   RTLRQAFEMYLDADEIHYIVNEHKRTDLAPETILNDFFSGDLPDHPEPQDLKSQTAIEY
FT                   GLQCMVDAFRPPRPAKVTHLYDVQWHYPFKWQVNAEFPFSVVPHFLGLRKTFNDFYDHL
FT                   THTWSKYVNPLDAQQRYGSDPSPDTLSQVVPPKFGFMKDLIFSFVHSWQHIIKSRFKST
FT                   AGYTHSNYIRQRFLFPMLLHIKTAVVKFDAPNKLRTIWGVSKLWIISEAQIYWEYIAWI
FT                   KLNPGITPMLWGYETFTGGWYRLYSTLWQPNENVTYITIDWSRFDKRAYFWLIQKIFIR
FT                   TRQFFDFNNGYVPTKDYPFSPTDPDKLQALWEWTIEAFFDSPIIVPDGRMFKRLFAGIP
FT                   SGLFITQLMDSWYNYTMLCSILYYMGIDPKSCIIKVQGDDSIIRLAILIPKDEHDIFLS
FT                   QMQEVADHLFGAIISLEKSELRNHINGCEVLSYRHIDGLPYRNLLKMLAQFYHTKARDP
FT                   TPAITMAQAIGFAYAACGNDFRIHSLLKEIYDYYKKLGYSPNPAGMSLVFGNSPDRPDF
FT                   PLPFDHFPEQSEVQQYFLSLDYRNAEQDAKTWPMSHFLSAPCT"
XX
SQ   Sequence 2033 BP; 590 A; 591 C; 333 G; 519 T; 0 other;
     agataaactg acagaacgac ctcagaaaat cctcagccct gaaaattaaa gctgatttgt        60
     cgcaatctga atcaaatcta ccacacccac tcaccatgga atacctaaca agtctatttt       120
     cccgcgttct caacatcact tctcaagtca cgaacttcaa gctcgtcgac actactgagt       180
     acggtccatc aattccgtat atcaatgaag ttgcagttga aaatcacaaa cgcacactcc       240
     gtcaagcatt cgaaatgtat ctcgatgccg atgagattca ctacatcgtc aacgaacaca       300
     agcgaacaga tctggcccct gaaaccatcc tcaacgattt cttttccggc gatcttcctg       360
     atcatccaga acctcaagac cttaaaagtc aaaccgctat cgaatacggt ctacaatgca       420
     tggtcgacgc cttccgtccc ccacgcccag ctaaagtcac acatctttac gatgttcaat       480
     ggcattaccc attcaaatgg caagtaaacg ctgagtttcc tttctcagtt gttccccatt       540
     tcctaggact acgcaagacc ttcaatgact tctatgacca tctaactcac acttggtcca       600
     agtacgtcaa cccgctcgac gctcaacaac gctacggatc cgacccgtca cctgacactc       660
     tatcacaagt tgtcccacca aaatttggat ttatgaaaga tcttatcttt tcgttcgtcc       720
     attcatggca acacatcatc aagtcacgtt tcaagtcaac agctggatac acccactcca       780
     actacatccg tcaacgtttt ctcttcccca tgcttcttca catcaagact gctgtcgtaa       840
     aattcgacgc tcccaacaag ctccgcacca tctggggtgt ttctaaactc tggatcatct       900
     ccgaagctca aatctattgg gaatacatcg catggatcaa actcaatcct ggcatcactc       960
     cgatgctctg gggttacgaa acgttcactg gaggctggta tcgattatat tcgacactct      1020
     ggcaaccaaa tgaaaatgta acctacatca cgattgactg gtcccgcttc gacaaacgtg      1080
     cctacttttg gctcatccaa aagatattta ttcgcacaag acagttcttc gacttcaaca      1140
     atggttacgt ccccaccaag gactacccct ttagcccaac tgatcccgac aagctccaag      1200
     ctctctggga atggactatt gaagcattct tcgactcacc gatcatcgtt cccgacggcc      1260
     gcatgtttaa gcgactcttc gctggcatac cctcaggcct attcatcaca cagttaatgg      1320
     attcatggta caactacact atgttgtgct ctatccttta ctacatggga atcgatccta      1380
     aatcgtgcat catcaaagta caaggcgacg actcaatcat tcgtcttgct atactgatac      1440
     ccaaagatga gcatgatatt tttctctctc aaatgcaaga ggtagctgac caccttttcg      1500
     gcgctatcat ctctctcgag aaatcggaac tacgaaacca catcaatgga tgcgaagttc      1560
     ttagctatcg tcacatcgac ggcttacctt accgcaacct acttaagatg ctcgcccagt      1620
     tctatcacac gaaggcaaga gacccgactc ccgctatcac aatggctcaa gccattggat      1680
     tcgcatacgc agcctgtggc aatgacttca gaatccactc tcttctcaaa gagatttacg      1740
     attactacaa gaagttaggc tactccccaa accccgctgg tatgagtctc gtattcggaa      1800
     acagccctga ccggcctgat ttcccgctac cgtttgatca cttccctgaa caaagcgaag      1860
     ttcaacagta cttcctgtca ctcgactacc gtaacgcaga acaagacgcc aaaacctggc      1920
     ccatgtctca cttcctctct gccccttgca cgtagattgt ttgctcacat ttcttatttt      1980
     ttaaaaaaaa aaaaaaaaac aagaaaaaaa aaaaaaaaaa aactcaaata ctc             2033
//