ID   HQ541324; SV 1; linear; genomic RNA; STD; VRL; 1866 BP.
XX
AC   HQ541324;
XX
DT   17-JAN-2011 (Rel. 107, Created)
DT   13-DEC-2011 (Rel. 111, Last updated, Version 3)
XX
DE   Heterobasidion RNA virus 1 isolate HetRV1-ab1 putative coat protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Heterobasidion partitivirus 1
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-1866
RX   PUBMED; 22115442.
RA   Vainio E.J., Hakanpaa J., Dai Y.C., Hansen E., Korhonen K., Hantula J.;
RT   "Species of Heterobasidion host a diverse pool of partitiviruses with
RT   global distribution and interspecies transmission";
RL   Fungal Biol 115(12):1234-1243(2011).
XX
RN   [2]
RP   1-1866
RA   Vainio E.J.;
RT   ;
RL   Submitted (04-NOV-2010) to the INSDC.
RL   Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1 POB
RL   18, Vantaa 01301, Finland
XX
DR   MD5; 33e34c8cee28920c3ba267206773de16.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1866
FT                   /organism="Heterobasidion partitivirus 1"
FT                   /host="Heterobasidion abietinum"
FT                   /isolate="HetRV1-ab1"
FT                   /mol_type="genomic RNA"
FT                   /country="Greece"
FT                   /isolation_source="Abies cephalonica"
FT                   /collected_by="P. Tsopelas"
FT                   /collection_date="1993"
FT                   /db_xref="taxon:942041"
FT   CDS             113..1645
FT                   /codon_start=1
FT                   /product="putative coat protein"
FT                   /db_xref="GOA:E7E1E9"
FT                   /db_xref="UniProtKB/TrEMBL:E7E1E9"
FT                   /protein_id="ADV15442.1"
FT                   /translation="MAQNTVSAQVPTMEPQPAGPGVAQPQVNLAPPVPDPRDVAANAMM
FT                   PQVPGPMPSSSGALSTITAALGYNRFLPMTFGRSTYTPSFILLSLVLSEFDRIMINTHR
FT                   FYQTSPEWHPIMSQLYYGVIFIVHILVARRTAQVISIDENNFLDWFETNFPLSSLPIAG
FT                   PLKHFFQAITVTCGPSKYYGNIYPQLNTDWTAAFANYYMPDNAISNNHLPPLPIFMDML
FT                   NDLLADRPGRAATATVTPRLAFDHRNVDHWRSYYLPLSHTFSAMNNSSAVFQFAGMTSL
FT                   HALPATAMPNWYDASLFFGYPNRIDGNALANISTIGEFTRLGTAGTQHTLWFSRTIQVM
FT                   QRHAQFAKDSTSLASISTKGLGACLPILHLSANAELSLPNATNNGQTVRNVQAIAPNVT
FT                   GAAAAAVATSPGRPAGFAVARPTHFTVRATSKLESLHLLAEQFSLLSCINLDMTNLAAR
FT                   GNAYHAFTTNAQVRHGPFWDLADVKSHTEINVLGQISSFLAGAFHVDQRQTK"
XX
SQ   Sequence 1866 BP; 474 A; 653 C; 313 G; 426 T; 0 other;
     ggatcacccg acagaacagt tctcacacct cgtctaagcc ctgaaaacta aagctttttc        60
     gctgctctct gaatcgcatc caccacacac cgttactcaa caagtacata caatggccca       120
     aaacaccgtt tccgctcaag ttccaaccat ggaaccccag cccgccggac ccggagtcgc       180
     ccaaccccaa gtcaacttgg ccccccccgt tcctgaccct cgtgacgtcg ctgctaacgc       240
     aatgatgccc caagtcccag gtcctatgcc tagttcgtct ggtgcgctct cgaccatcac       300
     cgccgccctc ggatacaatc ggttcctgcc catgaccttc ggaagatcga cctacacacc       360
     gtctttcatc ttgctctccc tcgtcctctc agagttcgac cgcattatga tcaatacgca       420
     tcgcttctac caaacgtctc ctgaatggca cccgatcatg tctcaacttt actatggcgt       480
     gatattcatc gtccacatcc tcgtcgctcg tcgcacagcc caggttatct ccatcgatga       540
     gaacaacttc ctcgactggt tcgaaaccaa cttcccgctg tcctcgctcc cgatcgctgg       600
     cccgcttaaa cactttttcc aagccatcac agtcacctgt ggcccaagca agtactatgg       660
     caacatctat cctcagctca acactgattg gaccgccgca ttcgctaact actacatgcc       720
     ggacaatgcc atctccaaca accacttgcc accgcttccc atcttcatgg acatgctcaa       780
     cgacctcctc gctgaccgtc ccggacgcgc cgccactgcc accgtcaccc cccgtctcgc       840
     tttcgatcat cgcaacgtcg accactggcg cagctactat ctgcccttgt ctcacacgtt       900
     ttctgcaatg aacaactcgt ctgccgtatt ccaattcgct ggtatgactt cgcttcacgc       960
     tcttcccgct actgccatgc ctaactggta tgacgcatcc ctcttcttcg gctacccaaa      1020
     ccgtatcgat ggaaacgcgc ttgccaacat ctccaccatt ggagagttca cccgcctcgg      1080
     aactgctggt acccaacaca cgttgtggtt ctcccgcacc atccaggtca tgcaacgcca      1140
     cgctcagttc gccaaagatt cgacctccct cgcatctatc tccaccaaag gactcggcgc      1200
     ctgtctcccc atcctacatc tctcagccaa cgcagagctc agcctcccca acgccaccaa      1260
     caacggacaa accgtccgca acgtccaagc tatcgctccc aacgtcaccg gtgccgccgc      1320
     tgctgccgtc gccacatccc caggccgccc cgctggattc gctgtcgccc gccccaccca      1380
     cttcacagtt cgcgctactt ccaagctcga atctcttcat ctcttggccg aacagttctc      1440
     tcttctttca tgcatcaatc ttgacatgac caatcttgcc gcccgcggta atgcatacca      1500
     tgcattcacc actaacgctc aggtccgtca cggtcccttc tgggatctcg ctgatgttaa      1560
     gagtcacact gaaatcaacg tcctcggaca gatcagctct ttcctcgctg gtgctttcca      1620
     cgtcgatcaa cgtcagacca agtaatcaca atttgtttct ttccggattg attgtttttg      1680
     tcgaattttc tcttcttcgc taaaggttgg ttcaacccca cctttcctca atcactcgta      1740
     taaccggttc ccgtttatca aaaaaaaaaa aaataaaaaa aaaaaaaaaa aaaaaaaaaa      1800
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1860
     aaaccc                                                                 1866
//