ID   HQ452363; SV 1; linear; genomic RNA; STD; VRL; 1287 BP.
XX
AC   HQ452363;
XX
DT   07-MAY-2013 (Rel. 116, Created)
DT   07-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Plum pox virus strain D isolate Niksic 10 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1287
RA   Virscek Marn M., Mavric Plesko I., Zindovic J.;
RT   "Plum pox virus isolates from Montenegro";
RL   Unpublished.
XX
RN   [2]
RP   1-1287
RA   Virscek Marn M., Mavric Plesko I., Zindovic J.;
RT   ;
RL   Submitted (28-OCT-2010) to the INSDC.
RL   Plant Protection Department, Kmetijski institut Slovenije (Agricultural
RL   Institute of Slovenia), Hacquetova ulica 17, Ljubljana SI-1000, Slovenia
XX
DR   MD5; 5f2015673a419e313fe8ced6fcfa984c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1287
FT                   /organism="Plum pox virus"
FT                   /host="plum"
FT                   /strain="D"
FT                   /isolate="Niksic 10"
FT                   /mol_type="genomic RNA"
FT                   /country="Montenegro"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..>1287
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:R4H649"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:R4H649"
FT                   /protein_id="ADT64740.1"
FT                   /translation="DDMYIPKLEPERIVSILEWDRSNEPIHRLEAICASMVEAWGYKEL
FT                   LREIRKFYSWVLEQAPYNALSKDGKAPYIAETALKKLYTDTEASETEIERYLEAFYNDI
FT                   DDDGESNVVVHQADEREDEEEVDAGKPIVVTAPAATSPILQPPPVIQPAPRTTAPMLNP
FT                   IFTPATTQPATKPVSPMSRPQLQTFGTHGNEDASPSNSNALVNTNRDRDIDAGSIGTFT
FT                   VPRLKAMTSKLSLPKVKGKAIMNLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRDYD
FT                   VTDDEMSIILNGLMVWCIENGTSPNINGMWVMMDGEIQVEYPIKPLLDHAKPTFRQIMA
FT                   HFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHIQM
FT                   KAAALRNVQNRLFGLDGNVGTQEEDTERHT"
FT   mat_peptide     <1..348
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     349..1287
FT                   /product="coat protein"
FT                   /note="CP"
XX
SQ   Sequence 1287 BP; 414 A; 279 C; 306 G; 288 T; 0 other;
     gatgacatgt acattcccaa gctggagcct gagaggattg tatcaatact tgaatgggac        60
     agatcaaatg agccaatcca tcgattggag gcaatttgtg cttcaatggt ggaagcgtgg       120
     ggttataagg agctgctgag ggaaatccgg aaattctaca gttgggttct tgaacaagca       180
     ccatacaatg ctctttcaaa agatggaaaa gccccgtaca ttgcggagac agcactgaag       240
     aagctttaca ctgacactga agcctctgag acagaaattg agcgatatct tgaagctttt       300
     tacaacgaca ttgacgatga tggtgagtct aacgttgttg tgcaccaagc tgacgaaaga       360
     gaagacgagg aggaagttga cgcaggcaag ccgattgtag ttactgcacc ggcagcaact       420
     agcccaatac ttcaaccacc tccagtcata cagcctgcac cccggactac ggcgccaatg       480
     ctcaacccca ttttcacgcc agcaacaact caaccagcaa caaaaccagt ttcaccgatg       540
     tcaagacctc aactgcaaac ttttggaacg catggtaatg aggatgcctc acctagcaac       600
     tcaaacgcgc tagtcaacac aaacagagac agggacattg atgcgggatc aattggaact       660
     ttcacagtac cacgtttgaa ggcaatgact tcgaaactat ccctgccaaa ggtgaaggga       720
     aaggccatta tgaacttgaa ccatttggca cattatagtc ctgcacaggt tgacttgtca       780
     aacacgagag ctccgcagtc ttgtttccaa acttggtacg aaggagttaa gcgagattat       840
     gatgtcacgg acgatgaaat gagcatcatt ttaaatggtc taatggtttg gtgcatagag       900
     aatggaacat ccccgaatat caatggaatg tgggtgatga tggatgggga aatacaagtg       960
     gagtatccaa taaagccatt gttggatcat gcgaaaccca cttttagaca aattatggca      1020
     catttcagta acgtggctga agcgtatatt gaaaaacgga attatgaaaa agcatacatg      1080
     ccaaggtatg gaattcagcg caacctgaca gactacagcc tcgccagata tgcctttgat      1140
     ttttacgaaa tgacttcaac gacacccgta cgggcacgtg aagctcatat ccagatgaag      1200
     gcagcagcat tgagaaatgt tcaaaatcgt ttatttggct tggatggaaa cgtcggaaca      1260
     caagaagagg acacagagag acacacc                                          1287
//