ID   HQ452362; SV 1; linear; genomic RNA; STD; VRL; 1550 BP.
XX
AC   HQ452362;
XX
DT   07-MAY-2013 (Rel. 116, Created)
DT   07-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Plum pox virus strain D isolate Niksic 9 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1550
RA   Virscek Marn M., Mavric Plesko I., Zindovic J.;
RT   "Plum pox virus isolates from Montenegro";
RL   Unpublished.
XX
RN   [2]
RP   1-1550
RA   Virscek Marn M., Mavric Plesko I., Zindovic J.;
RT   ;
RL   Submitted (28-OCT-2010) to the INSDC.
RL   Plant Protection Department, Kmetijski institut Slovenije (Agricultural
RL   Institute of Slovenia), Hacquetova ulica 17, Ljubljana SI-1000, Slovenia
XX
DR   MD5; 2d7227cd4d10751d3c6291803a073b3e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1550
FT                   /organism="Plum pox virus"
FT                   /host="plum"
FT                   /strain="D"
FT                   /isolate="Niksic 9"
FT                   /mol_type="genomic RNA"
FT                   /country="Montenegro"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..1344
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:R4H6T8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:R4H6T8"
FT                   /protein_id="ADT64739.1"
FT                   /translation="YDDMYIPKLEPERIVSILEWDRSNEPIHRLEAICASMVEAWGYKE
FT                   LLREIRKFYSWVLEQAPYNALSKDGKAPYIAETALKKLYTDTEASETEIERYLEAFYND
FT                   IDDDGESNVVVHQADEREDEEEVDAGKPVVVTAPAATSPILQPPPVIQPAPRTTAPMLN
FT                   PIFTPATTQPATKPVSPMSRPQLQTFGTHGNEDASPSNSNALVNTNRDRDIDAGSIGTF
FT                   TVPRLKAMTSKLSLPKVKGKAIMNLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRDY
FT                   DVTDDEMSIILNGLMVWCIENGTSPNINGMWVMMDGETQVEYPIKPLLDHAKPTFRQIM
FT                   AHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHIQ
FT                   MKAAALRNVQNRLFGLDGNVGTQEEDTERHTAGDVNRNMHNLLGVRGV"
FT   mat_peptide     <1..351
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     352..1341
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1345..1550
XX
SQ   Sequence 1550 BP; 473 A; 335 C; 361 G; 381 T; 0 other;
     tacgatgaca tgtacattcc caagctggag cctgagagga ttgtatcaat acttgaatgg        60
     gacagatcaa atgagccaat ccatcgattg gaggcaattt gtgcttcaat ggtggaagcg       120
     tggggttata aggagctgct gagggaaatc cggaaatttt acagttgggt tcttgaacaa       180
     gcaccataca atgctctttc aaaagacgga aaagccccgt acattgcgga gacagcactg       240
     aagaagcttt acactgacac tgaagcgtct gagacagaaa ttgagcgata tcttgaagct       300
     ttttacaacg acattgacga tgatggtgag tccaacgttg ttgtgcacca agctgacgaa       360
     agagaagatg aggaagaagt tgacgcaggc aagccggttg tagttactgc accggcagca       420
     actagcccaa tacttcaacc acctccagtc atacagcctg caccccggac tacggcgcca       480
     atgctcaacc ccattttcac gccagcaaca actcaaccag caacaaaacc agtttcaccg       540
     atgtcaagac ctcaactgca aacttttgga acacatggta atgaggatgc ctcacctagc       600
     aactcaaacg cgctagtcaa cacaaacaga gacagggaca tcgatgcagg atcaattgga       660
     actttcacag tgccacgttt gaaggcaatg acttcgaaac tatctctgcc aaaggtgaaa       720
     ggaaaggcca ttatgaactt gaaccatttg gcacattata gtcctgcaca ggtcgacttg       780
     tcaaacacga gagctccgca gtcttgtttc caaacttggt atgaaggagt taagcgagat       840
     tatgatgtca cggacgatga aatgagcatc attttaaatg gtctaatggt ttggtgcata       900
     gagaatggaa catccccaaa tatcaatgga atgtgggtga tgatggatgg ggaaacacaa       960
     gtggagtatc caataaagcc attgttggat catgcgaaac ccacttttag acaaattatg      1020
     gcacatttca gtaacgtggc tgaagcgtat attgaaaaac gaaattatga aaaagcatac      1080
     atgccaaggt atggaattca gcgcaacctg acagactaca gcctcgccag atatgccttt      1140
     gatttttacg aaatgacttc aacgacaccc gtacgggcac gtgaagctca tatccaaatg      1200
     aaggcagcag cattgagaaa tgttcaaaat cgtttatttg gcttggatgg aaacgtcgga      1260
     acacaagaag aggacacaga gagacacacc gctggtgatg ttaatcgcaa catgcacaac      1320
     ctcctcggtg tgaggggagt gtagtggtct cggtatctat cataaactct acctgggtga      1380
     gagtttagtc atccagttgt ttttagattc ctgttagcat ccttttctcc gctttaatag      1440
     cagtacattc agtgaggttt tacctccata tgttctagtc tgttattgtc gaacacaggc      1500
     ccttgtatct gatgtagcga gtgcttcact ccattcgggt tatagttctt                 1550
//