ID   HQ452356; SV 1; linear; genomic RNA; STD; VRL; 1572 BP.
XX
AC   HQ452356;
XX
DT   07-MAY-2013 (Rel. 116, Created)
DT   07-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Plum pox virus strain D isolate Niksic 3 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1572
RA   Virscek Marn M., Mavric Plesko I., Zindovic J.;
RT   "Plum pox virus isolates from Montenegro";
RL   Unpublished.
XX
RN   [2]
RP   1-1572
RA   Virscek Marn M., Mavric Plesko I., Zindovic J.;
RT   ;
RL   Submitted (28-OCT-2010) to the INSDC.
RL   Plant Protection Department, Kmetijski institut Slovenije (Agricultural
RL   Institute of Slovenia), Hacquetova ulica 17, Ljubljana SI-1000, Slovenia
XX
DR   MD5; 45858fd762d4b316f9ba104e62d47e63.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1572
FT                   /organism="Plum pox virus"
FT                   /host="plum"
FT                   /strain="D"
FT                   /isolate="Niksic 3"
FT                   /mol_type="genomic RNA"
FT                   /country="Montenegro"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..1354
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:R4H6A6"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:R4H6A6"
FT                   /protein_id="ADT64733.1"
FT                   /translation="GVLYDDMYIPKLEPERIVSILEWDRSNEPIHRLEAICASMVEAWG
FT                   YKELLREIRKFYSWVLEQAPYNALSKDGKAPYIAETALKKLYTDTEASETEIERYLEAF
FT                   YNDIDDDGESNVVVHQADEREDEEEVDAGKPIVVTAPAATSPILQPPPVIQPAPRTAAP
FT                   MLNPIFTPATTQPATKPVSPMSRPQLQTFGTHGNEDASPSNSNALVNTNRDRDVDAGSI
FT                   GTFTVPRLKAMTSKLSLPKVKGKAIMNLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVK
FT                   RDYDVTDDDMSIILNGLMVWCIENGTSPNINGMWVMMDGETQVEYPIKPLLDHAKPTFR
FT                   QIMAHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYAFDFYEMTSTTPVRAREA
FT                   HIQMKAAALRNVQNRLFGLDGNVGTQEEDTERHTAGDVNRNMHNLLGVRGV"
FT   mat_peptide     <1..361
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     362..1351
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1355..1572
XX
SQ   Sequence 1572 BP; 474 A; 342 C; 373 G; 383 T; 0 other;
     aggcgttctc tacgatgaca tgtacattcc caagctggag cctgagagga ttgtatcaat        60
     acttgaatgg gacagatcaa atgagccaat ccatcgattg gaggcaattt gtgcttcaat       120
     ggtggaagcg tggggttata aggagctgct gagggaaatc cggaaatttt acagttgggt       180
     tcttgaacaa gcaccataca acgctctttc aaaagatgga aaagccccgt acattgcgga       240
     gacagcactg aagaagcttt acactgacac ggaagcgtct gagacagaaa ttgagcgata       300
     tcttgaagct ttttacaacg acattgacga tgatggtgag tccaacgttg ttgtgcacca       360
     agctgacgaa agagaagacg aggaagaagt tgacgcaggc aagccgattg tagttactgc       420
     accggcagca actagcccaa tacttcaacc acctccagtc atacagcctg caccccggac       480
     tgcggcgcca atgctcaacc ccattttcac gccagcaaca actcaaccag caacaaaacc       540
     agtttcacca atgtcaagac ctcaactgca aacttttgga acacatggta atgaggatgc       600
     ctcacctagc aactcaaacg cgctagttaa cacaaacaga gacagggacg tcgatgcagg       660
     atcaattgga actttcacag tgccacgttt gaaggcaatg acttcgaaac tatctctgcc       720
     aaaggtgaag ggaaaggcca ttatgaactt gaaccatctg gcacattata gtcctgcaca       780
     ggtcgacttg tcaaacacga gggctccgca gtcttgtttc caaacttggt atgaaggagt       840
     taagcgagat tatgatgtca cggacgatga tatgagcatc attttaaatg gtctaatggt       900
     ttggtgcata gagaatggaa catccccgaa tatcaatgga atgtgggtga tgatggatgg       960
     ggaaacacaa gtggagtatc caataaagcc attgttggat catgcgaaac ccacttttag      1020
     acaaattatg gcacatttca gtaacgtggc tgaagcgtat attgaaaaac gaaattatga      1080
     aaaagcatac atgccaaggt atggaattca gcgcaacctg acagactaca gcctcgccag      1140
     atatgccttt gatttttacg aaatgacttc aacgacacct gtacgggcac gtgaagctca      1200
     tatccagatg aaggcagcag cattgagaaa tgttcaaaat cgtttatttg gcttggatgg      1260
     aaacgtcgga acacaagaag aggacacaga gagacacacc gctggtgatg ttaatcgcaa      1320
     catgcacaac ctcctcggtg tgaggggagt gtagtggtct cggtatctat cataaactct      1380
     acctgggtga gagtctagtc atccagttgt ttttagattc ctgttagcat ccttttctcc      1440
     gctttaatag cagtacattc agtgaggttt cacctccata tgttctagtc tgttattgtc      1500
     gaacacaggc ccttgtatct gatgtagcga gtgcttcact ccattcgggt tatagttctt      1560
     gtgcaagaga ca                                                          1572
//