ID HQ450388; SV 1; linear; genomic RNA; STD; VRL; 6436 BP. XX AC HQ450388; XX DT 13-JAN-2011 (Rel. 107, Created) DT 17-JUL-2011 (Rel. 109, Last updated, Version 2) XX DE Potato virus X isolate PVX2.7b, complete genome. XX KW . XX OS Potato virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6436 RX DOI; 10.1104/pp.111.178012. RX PUBMED; 21576511. RA Jaubert M., Bhattacharjee S., Mello A.F., Perry K.L., Moffett P.; RT "ARGONAUTE2 mediates RNA-silencing antiviral defenses against Potato virus RT X in Arabidopsis"; RL Plant Physiol. 156(3):1556-1564(2011). XX RN [2] RP 1-6436 RA Bhattacharjee S., Moffett P.; RT ; RL Submitted (28-OCT-2010) to the INSDC. RL Boyce Thompson Institute for Plant Research, Tower Road, Ithaca, NY 14853, RL USA XX DR MD5; efc6497dca00c89c9eaf1a8209aa1ba6. DR EuropePMC; PMC5377869; 28466060. DR RFAM; RF00184; PVX_3. XX FH Key Location/Qualifiers FH FT source 1..6436 FT /organism="Potato virus X" FT /host="Nicotiana glutinosa" FT /isolate="PVX2.7b" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="Jan-2006" FT /db_xref="taxon:12183" FT CDS 84..4454 FT /codon_start=1 FT /product="replicase" FT /db_xref="GOA:E7E060" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E7E060" FT /protein_id="ADT79683.1" FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLANPYAQTV FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSILPQEPVTFMFLKPRKLNYM FT RRNPRIKDIFHNVAIEPRDVARYPKETIIDKLTEITTDTAYISDTLHFLDPSYIVETFQ FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFAHLQ FT WLKVGKIKWRDPKDSFLGHLNYTTEQVEMHTVTVQLQESFAANHLYCIRRGDLLTPEVR FT TFGQPDRYVIPPQIFLPKVHNCRKPILKKTMMQLFLYVRTVKVAKNCDIFAKIRQLIKS FT SDLDKYSAVELVYLVSYMEFLADLQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLFG FT LEDYAKLVKAVDFHPVDFSFKVETWDFRFHPLQAWKAFRPREVSDVEEMESLFSDGDLL FT DCFTRMPAYAVNAEEDLAAIRKTPEMDVGQEVKEPAGDRNQYSNPAETFLNRLHRKHSR FT EVKHQAVKKAKRLAEIQESMRAEGEAESNEMSGGMGAIPSNAELPSTSDAKQELTLPIT FT KPVPARWEDASFTNSSVEEEQVKLPGKEAVETATQQVIEGLPWKHWIPQLNAVGFKALE FT IQRDRSGAMIMPITEMVSGLEKEDFPEGTPKELARELLAMNRSPATIPLDLLRARDYGS FT DVKNKRIGAITKTQATSWGEYLTGKIESLTERKVATCVIHGAGGSGKSHAIQKALREIG FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALILGTGSIVIFDDYSKLPPGYIE FT ALICFYSKIKLVILTGDSRQSVYHETAEDASIRHLGPATEYFSKYCRYYLNATHRNKKD FT LANMLGVYSERTGVTEISMSAEFLEGIPTLVPSDEKRRLYMGTGRNDTFTYAGCQGLTK FT PKVQIVLDHNTQVCSANVMYTALSRATDRIDFVNTSANSSAFWEKLDSTPYLKTFLSVV FT REQALREYEPAEAEPIREPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHSNC FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDIGDVLFLNYQKA FT MGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS FT AWALNNWNFSRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI FT FLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKHSF FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLSKSGRGTVSLPRLRNFL" FT CDS 4485..5165 FT /codon_start=1 FT /product="25 kDa protein" FT /db_xref="GOA:E7E056" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:E7E056" FT /protein_id="ADT79684.1" FT /translation="MDILIISLKSLGYSRTSKSLDSGPLVVHAVAGAGKSTALRKLILR FT HPTFTVHTLGVPDKVSIRTRGIQKPGPIPEGNFAILDEYTLDNTTRNSYQALFADPYQA FT PEFSLEPHFYLETSFRVPRKVADLIAGCGFDFETNSQEEGHLEITGIFKGPLLGKVIAI FT DEESETTLSRHGVEFVKPCQVTGLEFKVVTIVSAAPIEEIGQSTAFYNAITRSKGLTYV FT RAGT" FT CDS 5146..5493 FT /codon_start=1 FT /product="12 kDa protein" FT /db_xref="GOA:Q77RX1" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q77RX1" FT /protein_id="ADT79685.1" FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNSLPHVGDN FT IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKYISQRNH FT TCACGNNHSSH" FT CDS 5426..5638 FT /codon_start=1 FT /product="8 kDa protein" FT /db_xref="GOA:Q85247" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q85247" FT /protein_id="ADT79686.1" FT /translation="MEVNTYLNAIILVLVVTIIAVISTSLVRTEPCVIKITGESITVLA FT CKLDAETIRAIADLKPLSVERLSFH" FT CDS 5649..6362 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:E7E059" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:E7E059" FT /protein_id="ADT79687.1" FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR FT AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI FT TGTTTVGPVVTLPPP" XX SQ Sequence 6436 BP; 1963 A; 1519 C; 1482 G; 1472 T; 0 other; aaaactaaac catacaccac caacataacc aaacccacca cgcccaattg ttacacaccc 60 acttgaaaaa gtaagtctaa caaatggcca aagtgcgcga ggtttaccaa tcctttacag 120 actccaccac aaaaactctc atccaagatg aggcttatag aaatattcgt cccatcatgg 180 aaaaacataa actagctaac ccatacgctc aaacggtcga ggcggctaat gacctagagg 240 ggttcggcat agccaccaat ccctatagca ttgaattgca tacacatgca gccgctaaga 300 ccatagagaa taaacttcta gaggtgcttg gttccatcct accacaagaa cctgttacat 360 ttatgttcct taaacccagg aagctaaact atatgagaag aaacccgcgg attaaggata 420 ttttccacaa tgttgccatt gaaccaagag acgtggcaag gtaccccaag gagacaataa 480 ttgacaagct cacagagatc acaacggaca cagcatacat tagtgacact ctgcacttct 540 tggatccgag ctacatagtg gagacattcc aaaattgtcc aaaattgcaa acattgtatg 600 cgaccttagt tctccccgtt gaggcagcct tcaaaatgga aagcactcac ccgaacatat 660 acagccttaa atacttcgga gatggtttcc agtacatacc aggcaaccat ggtggtggag 720 cataccatca tgaatttgct catttacaat ggctcaaagt gggaaagatc aagtggaggg 780 accccaaaga tagctttctc ggacatctca actacacgac tgagcaggtt gagatgcaca 840 cagtgacagt acagttgcag gaatcgttcg cggcaaacca cttgtactgc atcaggagag 900 gagacttgct cacaccagag gtgcgcactt tcggccaacc tgacaggtat gtgattccac 960 cacagatctt tctcccgaaa gttcacaact gcaggaagcc gattcttaag aaaactatga 1020 tgcaactctt cttgtatgtt aggacagtca aggtcgcaaa aaattgtgac atttttgcca 1080 agatcagaca attaattaaa tcatctgact tggacaaata ttctgctgtg gaactggttt 1140 atttagtaag ctatatggag ttccttgctg atttacaagc caccacctgc ttctcggaca 1200 cactttctgg tggcttgcta acaaagaccc ttgcaccggt gagggcttgg atacaagaaa 1260 agaaaatgca gctgtttggt cttgaggact acgcgaagtt agtcaaagca gttgatttcc 1320 acccagtgga tttttctttt aaagtggaaa cttgggactt cagattccac cccttgcaag 1380 cgtggaaagc cttccgacca agggaagtat cggatgtgga ggaaatggaa agtttgttct 1440 cagatgggga cctgcttgat tgcttcacaa gaatgccagc ttatgcagta aacgcagagg 1500 aagatttggc tgccatcagg aaaacgcctg agatggatgt cggtcaagaa gttaaagagc 1560 ctgcaggaga cagaaatcaa tactcaaacc ctgcagaaac tttcctcaac aggctccaca 1620 ggaaacatag tagggaggtg aaacatcagg ccgtaaagaa agccaaacgc ctagctgaga 1680 tccaggagtc catgagagct gaaggcgagg ccgaatcaaa tgagatgagc gggggcatgg 1740 gggcaatacc tagcaacgcc gaacttccca gcacgagtga tgccaagcaa gaactcacgc 1800 tcccaatcac taaacccgtt cctgcaaggt gggaagatgc ttcgttcaca aattccagcg 1860 tggaagagga gcaggtgaaa ctccctggaa aagaagccgt tgagacagca acacaacaag 1920 tcatcgaagg actcccttgg aaacactgga ttcctcaact aaatgctgtt ggattcaagg 1980 cgctagaaat tcagagggat aggagtggag caatgatcat gcccatcaca gaaatggtct 2040 ccgggttgga aaaagaggac ttcccggaag gaactccaaa agagttggca agagaattgc 2100 tcgctatgaa cagaagccct gccaccatcc ctttggacct gcttagagcc agagactacg 2160 gcagtgatgt gaagaacaag agaattggtg ctatcacaaa gacacaagca acaagttggg 2220 gcgagtacct cacagggaaa atagaaagcc tgactgagag gaaagttgcg acttgtgtca 2280 ttcatggagc tggaggctct gggaaaagtc atgccatcca gaaggcattg agagaaattg 2340 gcaagggctc ggacatcact gttgtcctgc cgaccaatga actgcggcta gattggagta 2400 agaaagtgcc caacactgaa ccatatatgt tcaagaccta tgaaaaggcc ttaattttgg 2460 gaacaggcag tatagtcatc ttcgacgatt actcaaaact tcctcccggt tacatagaag 2520 ccttaatctg tttctactct aaaataaagc tagtcattct aacaggagat agcagacaga 2580 gcgtctacca tgaaactgct gaggacgcct ccatcaggca tttgggacca gcgacagagt 2640 acttctcaaa atactgccga tactatctca atgccacaca ccgcaacaag aaagaccttg 2700 cgaacatgct tggtgtctac agtgaaagaa caggagtcac cgaaattagc atgagcgccg 2760 agttcttaga aggaatccca accttagtcc cctcggatga gaagagaagg ctgtacatgg 2820 gcaccgggag gaatgacacg ttcacatacg ctggatgcca agggctaacc aagccgaaag 2880 ttcaaatagt gttggaccac aacacccaag tgtgtagtgc gaatgtgatg tacacggcac 2940 tctctagagc caccgacagg atcgacttcg tgaacacaag tgcaaactct tcggccttct 3000 gggaaaagtt agacagcacc ccttatctca agactttcct atcagtggtg agagaacaag 3060 cactcaggga gtacgagccg gcagaggcag aaccaattcg agagcctgag ccccagacac 3120 acatgtgtgt cgagaatgag gagtccgtgc tagaagagta caaagaggag ctcttggaaa 3180 agtttgatag agagatccac tctgagtccc atggtcattc aaactgtgtc caaactgaag 3240 acacaactat tcagttgttt tcgcatcaac aggcaaaaga tgagaccctc ctctgggcga 3300 ctatagatgc gcggctcaag accagcaatc aagagacaaa cttccgagaa ttcttgagca 3360 agaaggacat tggggacgtt ctgtttctga actaccaaaa agctatgggt ttgcccaaag 3420 agcgtattcc tttttcacaa gaggtctggg aagcatgtgc ccacgaagtg caaagcaagt 3480 acttaagcaa gtcaaagtgc aacttgatca atgggactgt gagacagagc ccagactttg 3540 atgaaaacaa gattatggtg ttcctcaagt cgcagtgggt cacaaaagtg gaaaagctag 3600 gtctacccaa gatcaagcca ggccaaacca tagcagcttt ttaccagcag actgtgatgc 3660 tttttggaac tatggctagg tacatgcgtt ggttcagaca ggctttccag ccaaaagaag 3720 tcttcataaa ctgtgagacc acgccagaag acatgtctgc atgggccttg aacaactgga 3780 atttcagcag gcctagcttg gctaatgatt acacagcttt cgaccagtct caggatggag 3840 ctatgctgca atttgaggta ctcaaagcca agcaccactg cataccagag gagatcatcc 3900 aagcatacat agacattaag accaatgcac agattttcct aggcacattg tcaattatgc 3960 gtctgactgg tgaaggtccc acttttgatg caaacactga gtgcaacata gcttacaccc 4020 atacaaagtt tgacatccca gccggaactg cccaagttta tgcaggagac gactcagcac 4080 tggattgcgt tccagaagtg aagcatagtt tccacaggct tgaagacaaa ttgctcctca 4140 agtcaaagcc cgtaatcacg cagcaaaaga aaggcagttg gcctgagttt tgtggttggc 4200 tgattacacc aaaaggggta atgaaagacc caattaagct ccatgttagc ttaaaattgg 4260 ccgaagctaa gggcgaactc aagaaatgtc aagattccta tgagattgat ctgagttatg 4320 cttatgacca caaggactct ctgcatgact tgttcgatga gaaacagtgt caggcacata 4380 cactcacttg caggacacta agtaaatcag ggagaggcac tgtctcactt ccccgcctca 4440 gaaactttct ttaaccgtta agttacttta gagatttgaa taagatggat attctcatca 4500 ttagtttgaa aagtttaggt tattctagga cttctaaatc tttagattca ggacctttgg 4560 tagtacatgc agtagccgga gccggcaagt ccacagccct aaggaagttg attctcagac 4620 acccaacatt caccgtgcat acactcggtg tccctgacaa ggtgagtatc agaactagag 4680 gtatacagaa gccaggacct attcctgagg gcaatttcgc aatcctcgat gagtatactt 4740 tggacaacac cacaaggaac tcataccagg cactttttgc tgacccttat caggcacctg 4800 agtttagctt agagccccac ttctacttgg aaacatcatt tcgagttccg aggaaagtgg 4860 cagatttgat agcaggttgt ggcttcgatt ttgagaccaa ctcacaggaa gaagggcact 4920 tagagatcac tggcatattt aaagggcccc tacttgggaa ggtgatagcc attgatgagg 4980 agtctgagac aacactgtcc aggcatggtg ttgagtttgt taagccctgc caagtgactg 5040 gacttgaatt caaagtagtc actattgtgt ctgctgcacc aatagaggaa attggccagt 5100 ccacagcttt ttacaacgcc atcaccaggt caaagggatt gacatatgtc cgcgcaggga 5160 catagactga ccgctccggt caattctgaa aaagtgtaca tagtattagg tctatcattt 5220 gctttagttt caattacctt tctgctttct aggaatagtt taccccacgt cggtgacaac 5280 attcacagct tgccacacgg aggagcctac agagacggca ccaaagcaat cttgtacaac 5340 tccccaaatc tagggtcacg agtgagtcta cacaacggaa agaacgcagc gtttgctgcc 5400 gttttgctac tgactttact gatctatgga agtaaataca tatctcaacg caatcatact 5460 tgtgcttgtg gtaacaatca tagcagtcat tagcacttcc ttagtgagga ctgagccttg 5520 tgtcatcaag attactggag aatcaatcac agtgttggct tgcaaattag atgcagaaac 5580 catcagagcc attgccgatc tcaagccact ctccgttgaa cggttaagtt tccattgata 5640 ctcgaaagat gtcagcacca gctagcacaa cacaggccac agggtcaacc acctcaacta 5700 ccacgaaaac tgcaggcgca actcctgcta cagcttcagg actgttcacc atcccggatg 5760 gggatttctt tagcacagcc cgtgccatag tagctagcaa tgccgttgca acaaatgagg 5820 acctcagcaa gattgaggct atttggaagg acatgaaggt gcccacagac actatggcac 5880 aggctgcttg ggacttagtc agacactgcg ctgatgtggg ctcatctgct caaacagaaa 5940 tgatagatac aggtccctat tccaatggca tcagcagagc tcgactggca gcggcgatta 6000 aagaggtgtg cacacttagg caattttgca tgaagtatgc cccagtggta tggaactgga 6060 tgttgactaa caacagtcca cctgctaact ggcaagcaca gggtttcaag cctgagcaca 6120 aattcgctgc attcgacttc ttcaatggag tcactaatcc agccgccatc atgcccaaag 6180 aggggctcat ccggccaccg tctgaagctg aaatgaatgc tgcccaaact gctgcctttg 6240 tgaagattac aaaggccagg gcacaatcca acgactttgc cagcctagat gcagctgtca 6300 ctcgaggtcg tatcactgga acaacaaccg ttgggcctgt tgtcactctc ccaccaccat 6360 aactacgtct acataaccga cgcctacccc agtttcatag tattttctgg tttgattgta 6420 tgaataatat aaataa 6436 //