ID HQ450387; SV 1; linear; genomic RNA; STD; VRL; 6436 BP. XX AC HQ450387; XX DT 13-JAN-2011 (Rel. 107, Created) DT 17-JUL-2011 (Rel. 109, Last updated, Version 2) XX DE Potato virus X isolate PVX2.7, complete genome. XX KW . XX OS Potato virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6436 RX DOI; 10.1104/pp.111.178012. RX PUBMED; 21576511. RA Jaubert M., Bhattacharjee S., Mello A.F., Perry K.L., Moffett P.; RT "ARGONAUTE2 mediates RNA-silencing antiviral defenses against Potato virus RT X in Arabidopsis"; RL Plant Physiol. 156(3):1556-1564(2011). XX RN [2] RP 1-6436 RA Bhattacharjee S., Moffett P.; RT ; RL Submitted (28-OCT-2010) to the INSDC. RL Boyce Thompson Institute for Plant Research, Tower Road, Ithaca, NY 14853, RL USA XX DR MD5; 67ad2580ff3006fb22177d8814f2ee68. DR EuropePMC; PMC5377869; 28466060. DR RFAM; RF00184; PVX_3. XX FH Key Location/Qualifiers FH FT source 1..6436 FT /organism="Potato virus X" FT /host="Arabidopsis thaliana" FT /isolate="PVX2.7" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="May-2006" FT /db_xref="taxon:12183" FT CDS 84..4454 FT /codon_start=1 FT /product="replicase" FT /db_xref="GOA:E7E055" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E7E055" FT /protein_id="ADT79678.1" FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLANPYAQTV FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSILPQEPVTFMFLKPRKLNYM FT RRNPRIKDIFHNVAIEPRDVARYPKETIIDKLTEITTDTAYISDTLHFLDPSYIVETFQ FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFAHLQ FT WLKVGKIKWRDPKDSFLGHLNYTTEQVEMHTVTVQLQESFAANHLYCIRRGDLLTPEVR FT TFGQPDRYVIPPQIFPPKVHNCKKPILKKTMMQLFLYVRTVKVAKNCDIFAKIRQLIKS FT SDLDKYSAVELVYLVSYMEFLADLQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLFG FT LEDYAKLVKAVDFHPVDFSFKVETWDFRFHPLQAWKAFRPREVSDVEEMESLFSDGDLL FT DCFTRMPAYAVNAEEDLAAIRKTPEMDVGQEVKEPAGDRNQYSNPAETFLNKLHRKHSR FT EVKHQAAKKAKRLAEIQESMRAEGDAEPNEISGGMGAIPSNAELPGTNDARQELTLPTT FT KPVPARWEDASFTDSSVEEEQVKPLGKETVETATQQVIEGLPWKHWIPQLNAVGFKALE FT IQRDRSGTMIMPITEMVSGLEKEDFPEGTPKELARELFAMNRSPATIPLDLLRARDYGS FT DVKNKRIGAITKTQATSWGEYLTGKIESLTERKVATCVIHGAGGSGKSHAIQKALREIG FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALIGGTGSIVIFDDYSKLPPGYIE FT ALVCFYSKIKLIILTGDSRQSVYHETAEDASIRHLGPATEYFSKYCRYYLNATHRNKKD FT LANMLGVYSERTGVTEISMSAEFLEGIPTLVPSDEKRKLYMGTGRNDTFTYAGCQGLTK FT PKVQIVLDHNTQVCSANVMYTALSRATDRIHFVNTSANSSAFWEKLDSTPYLKTFLSVV FT REQALREYEPAEAEPIQEPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHSNC FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDIGDVLFLNYQKA FT MGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGAVRQSPDFDENKIMVFLKSQWV FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPDDMS FT AWALNNWNFSRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI FT FLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKHSF FT HRLEDKLLLKSRPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLIKSGRGTVSLPRLRNFL" FT CDS 4485..5165 FT /codon_start=1 FT /product="25 kDa protein" FT /db_xref="GOA:E7E056" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:E7E056" FT /protein_id="ADT79679.1" FT /translation="MDILIISLKSLGYSRTSKSLDSGPLVVHAVAGAGKSTALRKLILR FT HPTFTVHTLGVPDKVSIRTRGIQKPGPIPEGNFAILDEYTLDNTTRNSYQALFADPYQA FT PEFSLEPHFYLETSFRVPRKVADLIAGCGFDFETNSQEEGHLEITGIFKGPLLGKVIAI FT DEESETTLSRHGVEFVKPCQVTGLEFKVVTIVSAAPIEEIGQSTAFYNAITRSKGLTYV FT RAGT" FT CDS 5146..5493 FT /codon_start=1 FT /product="12 kDa protein" FT /db_xref="GOA:Q77RX1" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q77RX1" FT /protein_id="ADT79680.1" FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNSLPHVGDN FT IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKYISQRNH FT TCACGNNHSSH" FT CDS 5426..5638 FT /codon_start=1 FT /product="8 kDa protein" FT /db_xref="GOA:Q85247" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q85247" FT /protein_id="ADT79681.1" FT /translation="MEVNTYLNAIILVLVVTIIAVISTSLVRTEPCVIKITGESITVLA FT CKLDAETIRAIADLKPLSVERLSFH" FT CDS 5649..6362 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:E7E059" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:E7E059" FT /protein_id="ADT79682.1" FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR FT AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI FT TGTTTVGPVVTLPPP" XX SQ Sequence 6436 BP; 1972 A; 1516 C; 1472 G; 1476 T; 0 other; aaaactaaac catacaccac caacataacc aaacccacca cgcccaattg ttacacaccc 60 gcttgaaaaa gaaagtttaa caaatggcca aggtgcgcga ggtctaccaa tcttttacag 120 actccaccac aaaaactctc atccaagatg aggcttatag aaatattcgt cccatcatgg 180 aaaaacataa actagctaac ccatacgctc aaacggtcga ggcggctaat gacctagagg 240 ggttcggcat agccaccaat ccctatagca ttgaattgca tacacatgca gccgctaaga 300 ccatagagaa taaacttcta gaggtgcttg gttccatcct accacaagaa cctgttacat 360 ttatgttcct taaacccagg aagctaaact atatgagaag aaacccgcgg attaaggata 420 ttttccacaa tgttgccatt gaaccaagag acgtggcaag gtaccccaag gagacaataa 480 ttgacaagct cacagagatc acaacggaca cagcatacat tagtgacact ctgcacttct 540 tggatccgag ctacatagtg gagacattcc aaaattgtcc aaaattgcaa acattgtatg 600 cgaccttagt tctccccgtt gaggcagcct tcaaaatgga aagcactcac ccgaacatat 660 acagccttaa atacttcgga gatggtttcc agtacatacc aggcaaccat ggtggtggag 720 cataccatca tgaatttgct catttacaat ggctcaaagt gggaaagatc aagtggaggg 780 accccaaaga tagctttctc ggacatctca actacacgac tgagcaggtt gagatgcaca 840 cagtgacagt acagttgcag gaatcgtttg cggcaaacca cttgtactgc atcaggagag 900 gagacttgct cacaccagag gtgcgcactt tcggccaacc tgacaggtat gtgattccac 960 cacagatctt tcccccgaaa gttcacaact gcaagaagcc gattcttaag aaaactatga 1020 tgcaactctt cttgtatgtt aggacagtca aggtcgcaaa aaattgtgac atttttgcca 1080 agatcagaca attaattaaa tcatctgact tggacaaata ttctgctgtg gaactggttt 1140 atttagtaag ctatatggag ttccttgctg atttacaagc caccacctgc ttctcggaca 1200 cactttctgg tggcttgcta acaaagaccc ttgcaccggt gagggcttgg atacaagaaa 1260 agaaaatgca gctgtttggc cttgaggact acgcgaagtt agtcaaagca gttgatttcc 1320 acccagtgga tttttctttt aaagtggaaa cttgggactt cagattccac cccttgcaag 1380 cgtggaaagc cttccgacca agggaagtat cggatgtgga ggaaatggaa agtttgttct 1440 cagatgggga cctgcttgat tgcttcacaa gaatgccagc ttatgcagta aacgcagagg 1500 aagatttggc tgccatcagg aaaacgcctg agatggatgt cggtcaagaa gttaaagagc 1560 ctgcaggaga cagaaatcaa tactcaaacc ctgcagaaac tttcctcaac aagctccaca 1620 ggaaacacag tagggaggtg aaacaccagg ccgcaaagaa agctaaacgc ctagctgaaa 1680 tccaggagtc aatgagagct gaaggtgatg ccgaaccaaa tgaaataagc gggggcatgg 1740 gggcaatacc cagcaacgcc gaacttcctg gcacgaatga tgccagacaa gaactcacac 1800 tcccaaccac taaacctgtc cctgcaaggt gggaagatgc ttcattcaca gattctagtg 1860 tggaagagga gcaggttaaa ccccttggaa aagaaaccgt tgaaacagcg acgcaacaag 1920 tcatcgaagg acttccttgg aaacactgga ttcctcaatt aaatgctgtt ggattcaagg 1980 cgctagaaat tcagagggat aggagtggaa caatgatcat gcccatcaca gaaatggtct 2040 ccgggctgga aaaagaggac ttccctgaag gaactccaaa agagttggca agagaattgt 2100 tcgctatgaa cagaagccct gccaccatcc ctttggacct gcttagagcc agagactacg 2160 gcagtgatgt gaagaacaag agaattggtg ccatcacaaa gacacaagca acgagttggg 2220 gcgaatactt gacagggaaa atagaaagct tgactgagag gaaagttgcg acttgtgtca 2280 ttcatggagc tggaggttct ggaaaaagtc atgccatcca gaaggcattg agagaaattg 2340 gcaagggctc ggacatcact gtagtcctgc cgaccaatga actgcggcta gattggagta 2400 agaaagtgcc taacactgag ccctatatgt tcaagaccta tgaaaaggcg ttaattgggg 2460 gaacaggcag catagtcatc tttgacgatt actcaaaact tcctcccggt tacatagaag 2520 ccttagtctg tttctactct aaaatcaagc taatcattct aacaggagat agcagacaaa 2580 gcgtctacca tgaaactgct gaggacgcct ccatcaggca tttgggacca gcaacagagt 2640 acttctcaaa atactgccga tactatctca atgccacaca ccgcaacaag aaagatcttg 2700 cgaacatgct tggtgtctac agtgagagaa cgggagtcac cgaaatcagc atgagcgccg 2760 agttcttaga aggaatccca actttggtac cctcggatga gaagagaaag ctgtacatgg 2820 gcaccgggag gaatgacacg ttcacatacg ctggatgcca agggctaact aagccgaagg 2880 tacaaatagt gttggaccac aacacccaag tgtgtagcgc gaatgtgatg tacacggcac 2940 tttctagagc caccgatagg attcacttcg tgaacacaag tgcaaattct tcggccttct 3000 gggaaaagtt ggacagcacc ccttacctca agactttcct atcagtggtg agagaacaag 3060 cactcaggga gtacgagccg gcagaggcag agccaattca agagcctgag ccccagacac 3120 acatgtgtgt cgagaatgag gagtccgtgc tagaagagta caaagaggaa ctcttggaaa 3180 agtttgacag agagatccac tctgaatccc atggtcattc aaactgtgtc caaactgaag 3240 acacaaccat tcagttgttt tcgcatcaac aagcaaaaga tgagaccctc ctctgggcga 3300 ctatagatgc gcggctcaag accagcaatc aagagacaaa cttccgagaa ttcctgagca 3360 agaaggacat tggggacgtt ctgtttttaa actaccaaaa agctatgggt ttacccaaag 3420 agcgtattcc tttttcccaa gaggtctggg aagcttgtgc ccacgaagta caaagcaagt 3480 acctcagcaa gtcaaagtgc aacttgatca atggggctgt gagacagagc ccagacttcg 3540 atgaaaataa gattatggta ttcctcaagt cgcagtgggt cacaaaggtg gaaaaactag 3600 gtctacccaa gattaagcca ggtcaaacca tagcagcctt ttaccagcag actgtgatgc 3660 tttttggaac tatggctagg tacatgcgat ggttcagaca ggctttccag ccaaaagaag 3720 tcttcataaa ctgtgagacc acgccagatg acatgtctgc atgggccttg aacaactgga 3780 atttcagcag acctagcttg gctaatgact acacagcttt cgaccagtct caggatggag 3840 ctatgctgca atttgaggta ctcaaagcca agcaccactg cataccagag gagatcatcc 3900 aagcatacat agacattaag accaatgcac agattttcct aggcacattg tcaattatgc 3960 gtctgactgg tgaaggtccc acttttgatg caaacactga gtgcaacata gcttacaccc 4020 atacaaagtt tgacatccca gccggaactg ctcaagttta tgcaggagac gactcagcac 4080 tggattgcgt cccagaagtg aagcatagtt tccacaggct tgaagacaaa ttgctcctca 4140 agtcaaggcc cgtaatcacg cagcaaaaga aaggcagttg gcctgagttt tgtggttggc 4200 tgattacacc aaaaggggta atgaaagacc caattaagct ccatgttagc ttaaaattgg 4260 ccgaagctaa gggcgaactc aagaaatgtc aagattccta tgagattgat ctgagttatg 4320 cttatgacca caaggactct ctgcatgact tgttcgatga gaaacagtgt caggcacata 4380 cactcacttg caggacacta attaaatcag ggagaggcac tgtctcactt ccccgcctca 4440 gaaactttct ttaaccgtta agttacctta gagatttgaa taagatggat attctcatca 4500 ttagtttgaa aagtttaggt tattctagga cttctaaatc tttagattca ggacctttgg 4560 tagtacatgc agtagccgga gccggcaagt ccacagccct aaggaagttg attctcagac 4620 acccaacatt caccgtgcat acactcggtg tccctgacaa ggtgagtatc agaactagag 4680 gtatacagaa gccaggacct attcctgagg gcaatttcgc aatcctcgat gagtatactt 4740 tggacaacac cacaaggaac tcataccagg cactttttgc tgacccttat caggcacctg 4800 agtttagctt agagccccac ttctacttgg aaacatcatt tcgagttccg aggaaagtgg 4860 cagatttgat agcaggttgt ggcttcgatt ttgagaccaa ctcacaggaa gaagggcact 4920 tagagatcac tggcatattt aaagggcccc tacttgggaa ggtgatagcc attgatgagg 4980 agtctgagac aacactgtcc aggcatggtg ttgagtttgt taagccctgc caagtgactg 5040 gacttgaatt caaagtagtc actattgtgt ctgctgcacc aatagaggaa attggccagt 5100 ccacagcttt ttacaacgcc atcaccaggt caaagggatt gacatatgtc cgcgcaggga 5160 catagactga ccgctccggt caattctgaa aaagtgtaca tagtattagg tctatcattt 5220 gctttagttt caattacctt tctgctttct aggaatagtt taccccacgt cggtgacaac 5280 attcacagct tgccacacgg aggagcctac agagacggca ccaaagcaat cttgtacaac 5340 tccccaaatc tagggtcacg agtgagtcta cacaacggaa agaacgcagc gtttgctgcc 5400 gttttgctac tgactttact gatctatgga agtaaataca tatctcaacg caatcatact 5460 tgtgcttgtg gtaacaatca tagcagtcat tagcacttcc ttagtgagga ctgagccttg 5520 tgtcatcaag attactggag aatcaatcac agtgttggct tgcaaattag atgcagaaac 5580 catcagagcc attgccgatc tcaagccact ctccgttgaa cggttaagtt tccattgata 5640 ctcgaaagat gtcagcacca gctagcacaa cacaggccac agggtcaacc acctcaacta 5700 ccacgaaaac tgcaggcgca actcctgcta cagcttcagg actgttcacc atcccggatg 5760 gggatttctt tagcacagcc cgtgccatag tagctagcaa tgccgttgca acaaatgagg 5820 acctcagcaa gattgaggct atttggaagg acatgaaggt gcccacagac actatggcac 5880 aggctgcttg ggacttagtc agacactgcg ctgatgtggg ctcatctgct caaacagaaa 5940 tgatagatac aggtccctat tccaatggca tcagcagagc tcgactggca gcggcgatta 6000 aagaggtgtg cacacttagg caattttgca tgaagtatgc cccagtggta tggaactgga 6060 tgttgactaa caacagtcca cctgctaact ggcaagcaca gggtttcaag cctgagcaca 6120 aattcgctgc attcgacttc ttcaatggag tcactaatcc agccgccatc atgcccaaag 6180 aggggctcat ccggccaccg tctgaagctg aaatgaatgc tgcccaaact gctgcctttg 6240 tgaagattac aaaggccagg gcacaatcca acgactttgc cagcctagat gcagctgtca 6300 ctcgaggtcg tatcactgga acaacaaccg ttgggcctgt tgtcactctc ccaccaccat 6360 aactacgtct acataaccga cgcctacccc agtttcatag tattttctgg tttgattgta 6420 tgaataatat aaataa 6436 //