ID   HQ407435; SV 1; linear; genomic RNA; STD; VRL; 1358 BP.
XX
AC   HQ407435;
XX
DT   19-APR-2011 (Rel. 108, Created)
DT   19-APR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Potato virus Y isolate SY1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1358
RA   Cheng Y.H., Chen C.C., Liao J.Y., Deng T.C.;
RT   "Biological and molecular properties of Potato virus Y pepper isolates in
RT   Taiwan";
RL   Unpublished.
XX
RN   [2]
RP   1-1358
RA   Cheng Y.H., Chen C.C., Liao J.Y., Deng T.C.;
RT   ;
RL   Submitted (15-OCT-2010) to the INSDC.
RL   Plant Pathology Division, Agricultural Research Institute, No. 189,
RL   Jhongjheng Rd., Wufong, Taichung 41301, Taiwan
XX
DR   MD5; 0838db9390e711a593d8aef4e1f360b1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1358
FT                   /organism="Potato virus Y"
FT                   /host="Capsicum annuum L."
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="SY1"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /collection_date="Aug-2010"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..1030
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:F5A5Z3"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F5A5Z3"
FT                   /protein_id="AEB55004.1"
FT                   /translation="HELTHQIRRFYSWLLQQQPFAAIAQEGKAPYIASMALRKLYMDRA
FT                   VDAEELRAFTEMMVALDDEFECDSFEVHHQANDTIDAGENNKKDAKPAQGSIQPSSTKG
FT                   KDKDVNAGTSGTHTVPRIKAITSKMRMPKSKGAAALNLEHLLEYAPQQIDISNTRATQS
FT                   QFDTWYEAVRMAYDIGETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGNEQVEYPLKP
FT                   IVENAKPTLGQIMAHFSDVAEAYIEMRNKKEPYMPRYGLIRNLRDVSLARYAFDFYEVT
FT                   SRTPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVR
FT                   NM"
FT   mat_peptide     227..1027
FT                   /product="coat protein"
XX
SQ   Sequence 1358 BP; 421 A; 249 C; 333 G; 355 T; 0 other;
     tcatgaacta acacaccaaa tcaggagatt ttactcatgg ttattgcaac agcaaccttt        60
     tgcagcgata gcgcaggaag ggaaggctcc ttatatagca agcatggcgt tgaggaaact       120
     gtatatggat agggctgtgg atgcggaaga gctaagagcc ttcactgaaa tgatggttgc       180
     attagacgat gagtttgagt gtgactcttt tgaagtacac catcaagcaa atgacacaat       240
     tgatgctgga gagaataata agaaagatgc gaaaccagca cagggtagca tccagccaag       300
     ttctactaaa gggaaggata aggacgtgaa tgccggcaca tctggaacac atactgtacc       360
     aagaataaag gctattacgt caaaaatgag aatgcccaaa agcaagggag cagccgcact       420
     aaatttagaa cacttgcttg agtacgctcc acaacaaatt gatatttcaa atactcgagc       480
     aactcaatca cagtttgata cgtggtatga ggcagtgcgg atggcatacg acataggaga       540
     aactgagatg ccaactgtga tgaatgggct tatggtttgg tgcattgaaa atggaacctc       600
     gccaaatatc aacggagttt gggttatgat ggatgggaat gaacaagttg agtacccgct       660
     gaaaccaatc gttgagaatg caaaaccaac ccttgggcaa atcatggcac atttctcaga       720
     tgttgcagaa gcgtatatag aaatgcgcaa caaaaaggaa ccatacatgc cacgatatgg       780
     tttaattcga aacctgcggg atgtgagttt agcacgttat gcctttgact tttatgaagt       840
     cacatcacga acaccagtga gggctaggga agcgcacatt caaatgaagg ccgcagcatt       900
     gaaatcagcc caacctcgac ttttcgggtt ggacggtggc atcagtacac aagaggagaa       960
     cacagagagg cacaccaccg aggatgtctc tccaagtatg catactctac ttggagtcag      1020
     gaacatgtga tgtagtgtct ctccggacga tatataagta tttacatatg cagtaagtat      1080
     tttggctttt cctgtactac ttttatcata attaataatc agtttgaata ttattaatag      1140
     atagaggtgg cagggtgatt tcgtcattgt ggtgactcta tcttttaatt ccgcattatt      1200
     aagttttaga taaaagtgcc gggttgtcgt tgttgtggat gattcatcga ttaggtgatg      1260
     ttgcgattct gtcgtagcag tgactatgtc tggatctatc cgcttgggtg atgttgtgat      1320
     ttcgtcatag cagtgactgt aaacttcaat caggagac                              1358
//