ID   HQ407434; SV 1; linear; genomic RNA; STD; VRL; 1358 BP.
XX
AC   HQ407434;
XX
DT   19-APR-2011 (Rel. 108, Created)
DT   19-APR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Potato virus Y isolate PL1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1358
RA   Cheng Y.H., Chen C.C., Liao J.Y., Deng T.C.;
RT   "Biological and molecular properties of Potato virus Y pepper isolates in
RT   Taiwan";
RL   Unpublished.
XX
RN   [2]
RP   1-1358
RA   Cheng Y.H., Chen C.C., Liao J.Y., Deng T.C.;
RT   ;
RL   Submitted (15-OCT-2010) to the INSDC.
RL   Plant Pathology Division, Agricultural Research Institute, No. 189,
RL   Jhongjheng Rd., Wufong, Taichung 41301, Taiwan
XX
DR   MD5; d490ccb7769d73f32c205f6c7453f8d6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1358
FT                   /organism="Potato virus Y"
FT                   /host="Capsicum annuum L."
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="PL1"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..1030
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:F5A5Z2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F5A5Z2"
FT                   /protein_id="AEB55003.1"
FT                   /translation="SELTHQIRRFYSWLLQQQPFATIAQEGKAPYIASMALRKLYMDRA
FT                   VDEEELRAFTDMMVALDDEFECDSYEVHHQANDTIDAGGSNKKDAKPEQGSIQLNPNKG
FT                   KDKDVNAGTSGTHTVPRIKAITSKMRMPRSKGAAVLNLEHLLEYAPQQIDISNTRATQS
FT                   QFDTWYEAVRMAYDIGETEMPTVMNGLMVWCIENGTSPNVNGVWVMIDGNEQVEYPLKP
FT                   IVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGLIRNLRDMGLARYAFDFYEVT
FT                   SRTPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVK
FT                   NM"
FT   mat_peptide     227..1027
FT                   /product="coat protein"
FT   3'UTR           1031..1358
XX
SQ   Sequence 1358 BP; 425 A; 249 C; 332 G; 352 T; 0 other;
     ttctgaacta acacaccaaa tcaggagatt ctactcatgg ttgttgcaac agcaaccttt        60
     tgcaacaata gcgcaggaag ggaaggctcc ttatatagca agcatggcat taaggaaact       120
     gtatatggat agggctgtgg atgaggaaga gctaagagcc ttcactgaca tgatggtcgc       180
     attagacgat gagtttgagt gtgactctta tgaagtacac catcaagcaa atgacacaat       240
     tgatgcagga ggaagcaaca agaaagatgc aaaaccagag caaggtagca tccagttaaa       300
     cccgaacaaa ggaaaagaca aggatgttaa tgctggtaca tctggaacac atactgtacc       360
     gagaatcaag gctatcacgt ccaaaatgag aatgcccaga agcaagggag cagccgtgtt       420
     aaacttagaa catttgcttg agtatgctcc acagcaaatc gatatttcaa atactcgggc       480
     aactcaatca cagtttgata cgtggtatga ggcagtgcga atggcatacg acataggaga       540
     aactgagatg ccaactgtga tgaatgggct catggtttgg tgcattgaaa atggaacctc       600
     gccaaatgtc aacggagttt gggttatgat agatgggaat gaacaagttg agtacccgtt       660
     gaaaccaatc gttgagaatg caaaaccaac ccttaggcaa atcatggcac atttctcaga       720
     tgttgcagaa gcgtatatag aaatgcgtaa caaaaaggaa ccatatatgc cacgatatgg       780
     tttaattcga aatctgcgcg atatgggatt ggcgcgttat gcctttgact tttatgaggt       840
     cacatcacga acaccagtga gggctaggga agcgcacatt caaatgaagg ccgcagcatt       900
     gaaatcagcc caacctcgac ttttcgggtt ggacggtggc atcagtacac aagaggagaa       960
     cacagagagg cacaccaccg aggatgtttc tccaagtatg catactctac ttggagtcaa      1020
     gaacatgtga tgtagtgtct ctccggacga tatataagta tttacatatg cagtaagtat      1080
     tttggctttt cctgtactac ttttatcatg aataataatc agtttgaata ttactaatag      1140
     atggaggtag cagggtgatt tcgtcattgt ggtgactcta tctgttaatt ccgtattatt      1200
     aagtcttaga taaaagtgcc gggttgtcgt tgttgtggat gattcatcga ttaggtgatg      1260
     ttgcgattct gtcgtagcag tgactacatc tggatctatc tgcttgggtg gtgttgtgat      1320
     ttcgtcataa cagtgactgt aaacttcaat caggagac                              1358
//