ID HQ402595; SV 1; linear; genomic RNA; STD; VRL; 2971 BP. XX AC HQ402595; XX DT 20-JUL-2011 (Rel. 109, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate KM-T segment S, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2971 RA Dong J.-H., Yin Y.-Y., Yu X.Y., Duan Y.M., Zhang Z.-K.; RT "First report of Tomato spotted wilt virus in tomato and tobacco in China"; RL J Plant Pathol 92(S4):121(2010). XX RN [2] RP 1-2971 RA Yin Y.-Y., Dong J.-H., Zhang Z.-K.; RT ; RL Submitted (14-OCT-2010) to the INSDC. RL Institute of Biotechnology and Germplasm Resources, Yunnan Academy of RL Agricultural Sciences, Xueyun Road No.9, Kunming, Yunnan 650223, China XX DR MD5; 41c6ffe434cf8129abd5b4400cc6b060. XX FH Key Location/Qualifiers FH FT source 1..2971 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /host="tomato" FT /isolate="KM-T" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Jul-2008" FT /note="TSWV" FT /db_xref="taxon:3052585" FT gene 89..1492 FT /gene="NSs" FT CDS 89..1492 FT /codon_start=1 FT /gene="NSs" FT /product="nonstructural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:G0XS13" FT /protein_id="AEK28761.1" FT /translation="MSSSVYESIIQTKASVWGSTASGKAVVDSYWIHELGTGSPLVQTQ FT LYSDSRSKSSFGYTAKVGNLPCEEEEILSQHVYIPIFDDIDFSININDSVLALSVCSNT FT VNTNGVKHQGHLKVLSPAQLHSIGSTMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS FT CVKEHTYKVEMCYNQALGKVNVLSPNRNVHEWLYCFKPNFNQVESNNRTVNSLAVKSLL FT MSAENNIMPNSQAFVKASTDSHFKLNLWLRVPKVLKQISIQKLFKVAGDETNKTFYLSI FT ACIPNHNSVETALNISVICKHQLPIRKCQAPFELSMMFSDLKEPYNIVHDPSYPQRIVH FT ALLETHTSFAQVLCNNLQEDVIIYTLNNYELTPGKLDLVERTLNYSEDICKRKYFLSKT FT LECLPSNTQTMSYLDSIQIPSWKIDFARGEIKISPQSVSVAKSLLKLDLSGIKKKESKI FT SEAYASGSK" FT gene complement(2044..2820) FT /gene="N" FT CDS complement(2044..2820) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:D3K496" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:D3K496" FT /protein_id="AEK28762.1" FT /translation="MSKVKLTKENIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" XX SQ Sequence 2971 BP; 947 A; 550 C; 466 G; 1008 T; 0 other; agagcaattg tgtcagaatt ttattcttaa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaaaagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggtactg gttctccact agttcaaacc cagttgtatt ctgattcaag 240 aagcaaaagt agctttggct acactgcaaa ggtggggaat cttccctgtg aagaagaaga 300 gattctttct cagcatgtgt atatccctat ttttgatgat attgatttta gcatcaatat 360 taatgactct gttctggcac tatctgtttg ctcaaataca gttaatacta acggagtgaa 420 acatcaaggt catttgaaag ttttgtctcc tgctcagctc cattctattg gatctaccat 480 gaacagatct gatattacag accgattcca gctccaagaa aaagacataa ttcccaatga 540 cagatacatt gaagctgcga acaagggctc tttgtcttgt gttaaagagc atacctataa 600 ggtcgagatg tgctacaatc aagctttggg caaagtgaat gttctatccc ctaacagaaa 660 tgtccatgaa tggctgtact gtttcaagcc aaatttcaat caagttgaaa gcaacaacag 720 aactgtaaat tctcttgcag tgaaatctct tctcatgtca gcagaaaaca acatcatgcc 780 taactctcag gcttttgtaa aagcttccac tgattctcat ttcaagctga acctctggct 840 aagagttcca aaggttttga agcagatttc cattcagaaa ttgttcaaag ttgcaggaga 900 tgaaacaaac aaaacatttt atttatctat tgcttgcatt ccaaaccata acagtgttga 960 gacagcttta aacatttctg ttatttgcaa gcatcagctc ccaatccgta aatgtcaagc 1020 tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 tccttcatac cctcagagga ttgttcatgc tctgcttgaa actcacacat cttttgcaca 1140 agttctttgc aacaacttgc aagaagatgt gatcatctac actttgaaca actatgagct 1200 aactcctgga aagttagatc tagttgaaag aaccttgaat tacagtgaag atatctgcaa 1260 aaggaaatat ttcctttcaa aaacacttga atgtcttcca tctaacacac aaactatgtc 1320 ttacttagac agtatccaaa tcccttcctg gaagatagac tttgccaggg gagaaattaa 1380 aatttctcca caatctgttt cagttgcaaa atctttgtta aagcttgatt taagcgggat 1440 caaaaagaaa gaatctaaga tctcggaagc atatgcttca ggatcaaaat aatcttgccg 1500 tgtccagctt ttcctaatta tgttatgttt attttctttc tttactcata attatttctc 1560 tgttttgtca tttcttttga atttctcctg tttaatagaa accataaaaa taaaaataaa 1620 aataaaaata aaatcaaaat gaaacaaaaa tcaaaaaatg aaacaaaatc aaacaaaaat 1680 caaaaaatga aataaaaaca acaaaaaaat taaaaaacaa aaacccaaaa agatcccgaa 1740 agggacaatt ttggccaaat ttgggttttg ttttgttttt tgttttttgt tttttgtttt 1800 tattttattt ttatttttat ttatttattt tattttattt tatttttatt ttttctttta 1860 tttttatttt atgttttttg ttgtttttgt tattttgttt attattaagc acaacacaca 1920 gaaagcaaac tttaattaaa cacacttatt ttaaatttaa cacactaagc aagcacaagc 1980 aataaagata aagaaagctt tatatattta taggcttttt tataatttaa cttacaactg 2040 cttttaagca agttctgcaa gttttgcctg ttttttaacc ccgaacattt catagaactt 2100 gttaagagtt tcactgtaat gttccatagc aatacttcct ttagcattag gattgctgga 2160 gctaagtata gcagcatact ctttcccttt cttcacctga tcttcattca tttcaaatgc 2220 tttgcttttt agcacagtgc aaacttttcc taaggcttcc ctggtgtcat acttctttgg 2280 atcgatcccg aggtctttgt attttgcatc ctgatatata gccaagacaa cactgatcat 2340 ctcaaagcta tcaactgaag caataagagg taagctacct cccagcatta tggcaagcct 2400 cacagacttt gcatcatcaa gaggtaatcc ataggcttga atcagagggt gagaagcaat 2460 cttagatttg atagtattga gattctcaga attcccagtt tcctcgacaa gcctgaccct 2520 gatcaagcta tcaagccttc tgaaggtcat gtcagtggct ccaatcctgt ctgaagtttt 2580 ctttatagtg attttgccaa aagtaaaatc actttgctta ataaccttca ttatactctg 2640 acgattcttc aggaatgtca gacatgaaat aatgctcatc ttcttgatct ggtcaaggtt 2700 ttccagacaa aaagtcttga agttaaatgc taccagattc tgatcttctt caaattcaag 2760 atctttgcct tgtgtcaaca aagcaacaat gttttcctta gtgagcttaa ccttagacat 2820 gatgatcgta gaagttgtta tatgctttga ccgtatgtaa ttcaaggtgc gaaagtacaa 2880 ctctgtattc cgcagtcgtt tcttagggtt ttaatgtgat gatttgtaag actgagtgtt 2940 aaggtttgaa taaaattgac acaattgctc t 2971 //