ID   HQ401019; SV 1; linear; genomic RNA; STD; VRL; 942 BP.
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AC   HQ401019;
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DT   23-DEC-2010 (Rel. 107, Created)
DT   04-MAR-2011 (Rel. 108, Last updated, Version 2)
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DE   Grapevine leafroll-associated virus 3 isolate Touriga Nacional-2 coat
DE   protein gene, complete cds.
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KW   .
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OS   Grapevine leafroll-associated virus 3
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus.
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RN   [1]
RP   1-942
RX   DOI; 10.1007/s00705-010-0878-7.
RX   PUBMED; 21153745.
RA   Gouveia P., Santos M.T., Eiras-Dias J.E., Nolasco G.;
RT   "Five phylogenetic groups identified in the coat protein gene of grapevine
RT   leafroll-associated virus 3 obtained from Portuguese grapevine varieties";
RL   Arch. Virol. 156(3):413-420(2011).
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RN   [2]
RP   1-942
RA   Gouveia P., Santos M.T., Eiras-Dias J.E., Nolasco G.;
RT   ;
RL   Submitted (11-OCT-2010) to the INSDC.
RL   Center for Biodiversity, Functional and Integrative Genomics, Universidade
RL   Do Algarve, Campus de Gambelas, Faro 8005-139, Portugal
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DR   MD5; 602d5b765c6f137563238dee077e1538.
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FH   Key             Location/Qualifiers
FH
FT   source          1..942
FT                   /organism="Grapevine leafroll-associated virus 3"
FT                   /host="Vitis vinifera; cultivar Touriga Nacional"
FT                   /isolate="Touriga Nacional-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Portugal"
FT                   /collection_date="Jan-2008"
FT                   /db_xref="taxon:55951"
FT   CDS             1..942
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /db_xref="GOA:E2CV40"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:E2CV40"
FT                   /protein_id="ADT89787.1"
FT                   /translation="MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQ
FT                   AELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVF
FT                   EKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDD
FT                   TTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYE
FT                   NPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAI
FT                   LAWNLARQQAFRNKTVTADNTLHNVFQLLQKK"
XX
SQ   Sequence 942 BP; 298 A; 189 C; 246 G; 209 T; 0 other;
     atggcatttg aactgaaatt agggcagata tatgaagttg tccccgaaaa caatctgaga        60
     gttagagtag gggatgcggc acaaggaaag tttagtaagg cgagtttctt aaaatacgtt       120
     aaggacggga cgcaggcgga gttaacagga atcgctgtag tgccggaaaa gtacgtattc       180
     gccacagcag ctttagctac agcggcacag gagccaccta agcagccgac aacgcaagtg       240
     gtggaaccac cagaagccga tataggggtg gtgccggaat ctgagactct tacaccaaat       300
     aagctggttt ttgagaaaga tccagacaag ttcttaaaga ctatgggtaa ggggatagct       360
     ttggacttaa cgggggttac ccataaaccg aaagttatta acgagccggg aaaagtatca       420
     gtagaggtag caatgaagat taataccgca ttggtagagc tgtgtaagaa ggttatgggc       480
     tccgatgaca caacaaccaa gacaaaattc ttcttgtacg tgatgcagat cgcttgcacg       540
     ttctttacat cgtcttcgac ggagttcaaa gagttcgact acatagaaac ggacgatgga       600
     aagaagatat atgcggtgtg ggtatacgat tgcattaaac aagctgccgc ttcaacgggt       660
     tacgaaaacc cggtaaggca gtatctagca tacttcacgc caaccttgat cacggcgacc       720
     ctgaatggta aactggtgat gaatgaaaag gtcatggcac agcatggagt accaccgaaa       780
     ttctttccgt acgcgattga ctgcgttcgt ccgacgtacg atctgttcaa taacgacgca       840
     atactagcat ggaatttagc taggcagcag gcgtttagaa ataagacggt gacggccgat       900
     aacaccttac acaacgtctt ccaactattg cagaagaaat ag                          942
//