ID   HQ401018; SV 1; linear; genomic RNA; STD; VRL; 942 BP.
XX
AC   HQ401018;
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DT   23-DEC-2010 (Rel. 107, Created)
DT   04-MAR-2011 (Rel. 108, Last updated, Version 2)
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DE   Grapevine leafroll-associated virus 3 isolate Carrega-Tinto-4b coat protein
DE   gene, complete cds.
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KW   .
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OS   Grapevine leafroll-associated virus 3
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus.
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RN   [1]
RP   1-942
RX   DOI; 10.1007/s00705-010-0878-7.
RX   PUBMED; 21153745.
RA   Gouveia P., Santos M.T., Eiras-Dias J.E., Nolasco G.;
RT   "Five phylogenetic groups identified in the coat protein gene of grapevine
RT   leafroll-associated virus 3 obtained from Portuguese grapevine varieties";
RL   Arch. Virol. 156(3):413-420(2011).
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RN   [2]
RP   1-942
RA   Gouveia P., Santos M.T., Eiras-Dias J.E., Nolasco G.;
RT   ;
RL   Submitted (11-OCT-2010) to the INSDC.
RL   Center for Biodiversity, Functional and Integrative Genomics, Universidade
RL   Do Algarve, Campus de Gambelas, Faro 8005-139, Portugal
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DR   MD5; 6a07d8bd4ef065f78b5499963da4ee7d.
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FH   Key             Location/Qualifiers
FH
FT   source          1..942
FT                   /organism="Grapevine leafroll-associated virus 3"
FT                   /host="Vitis vinifera; cultivar Carrega-Tinto"
FT                   /isolate="Carrega-Tinto-4b"
FT                   /mol_type="genomic RNA"
FT                   /country="Portugal"
FT                   /collection_date="Jan-2008"
FT                   /db_xref="taxon:55951"
FT   CDS             1..942
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /db_xref="GOA:E7DXB3"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:E7DXB3"
FT                   /protein_id="ADT89786.1"
FT                   /translation="MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQ
FT                   AELTGIVVVPEKYVFATAALATAAQEPPKLPQAQVAEPPEAEIGVVPESETLTPNKLVF
FT                   EKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADD
FT                   AATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAASSTGYE
FT                   NPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAI
FT                   LAWNLPRQQAFRNKTVTADNTLHNVFQLLQKN"
XX
SQ   Sequence 942 BP; 296 A; 179 C; 248 G; 219 T; 0 other;
     atggcatttg aactgaaatt agggcagata tacgaagttg tccccgaaaa taatttgagg        60
     gttagagtag gggatgcagc acaagggaaa tttagtaagg cgagtttctt aaaatacgtt       120
     aaggacggga cgcaggcgga gttaacggga atcgtcgtag tgccggaaaa gtatgtattc       180
     gccacggcag cattagctac agcggcacag gagccaccta agctgccaca agcgcaagtg       240
     gcggaaccac ctgaagctga aataggggta gtaccggaat cagagactct tacgccaaat       300
     aagttggttt tcgagaaaga tccagacaag ttcttgaaga ccatgggcaa gggaatagct       360
     ttggatttaa cgggagttac ccataaaccg aaagttatta acgagccagg gaaagtatcg       420
     gtagaggtgg caatgaagat taacgccgca ttgatggagt tgtgtaagaa ggttatgggc       480
     gctgatgacg cagcaactaa gacgaagttc ttcttgtacg tgatgcagat cgcttgcacg       540
     ttcttcacat cgtcttcgac agagttcaaa gagttcgact atatagagac tgatgatgga       600
     aagaagatat acgcggtatg ggtgtatgat tgcattaaac aagctgcgtc ttcgacgggc       660
     tacgaaaacc cggtaaggca gtatctagct tactttacac caaccttcat cacggcgaca       720
     ttgaatggta agctagtgat gaatgaaaag gttatggcac agcacggagt accaccgaaa       780
     ttcttcccgt acacgataga ttgcgttcgt ccgacgtatg atctgttcaa taacgacgca       840
     atattagcgt ggaatttacc tagacaacag gcgtttagaa ataagacggt gacggctgac       900
     aacacattac ataatgtctt tcaactattg caaaagaact ag                          942
//