ID   HQ401017; SV 1; linear; genomic RNA; STD; VRL; 942 BP.
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AC   HQ401017;
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DT   23-DEC-2010 (Rel. 107, Created)
DT   04-MAR-2011 (Rel. 108, Last updated, Version 2)
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DE   Grapevine leafroll-associated virus 3 isolate Sevilhao-1 coat protein gene,
DE   complete cds.
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KW   .
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OS   Grapevine leafroll-associated virus 3
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus.
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RN   [1]
RP   1-942
RX   DOI; 10.1007/s00705-010-0878-7.
RX   PUBMED; 21153745.
RA   Gouveia P., Santos M.T., Eiras-Dias J.E., Nolasco G.;
RT   "Five phylogenetic groups identified in the coat protein gene of grapevine
RT   leafroll-associated virus 3 obtained from Portuguese grapevine varieties";
RL   Arch. Virol. 156(3):413-420(2011).
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RN   [2]
RP   1-942
RA   Gouveia P., Santos M.T., Eiras-Dias J.E., Nolasco G.;
RT   ;
RL   Submitted (11-OCT-2010) to the INSDC.
RL   Center for Biodiversity, Functional and Integrative Genomics, Universidade
RL   Do Algarve, Campus de Gambelas, Faro 8005-139, Portugal
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DR   MD5; 2ee8362f0b5814aeb8e20ff058c19e55.
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FH   Key             Location/Qualifiers
FH
FT   source          1..942
FT                   /organism="Grapevine leafroll-associated virus 3"
FT                   /host="Vitis vinifera; cultivar Sevilhao"
FT                   /isolate="Sevilhao-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Portugal"
FT                   /collection_date="Jan-2008"
FT                   /db_xref="taxon:55951"
FT   CDS             1..942
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /db_xref="GOA:Q45QZ2"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:Q45QZ2"
FT                   /protein_id="ADT89785.1"
FT                   /translation="MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQ
FT                   AELTGIAVVPEKYVFATAALATAAQEPPRQPPAQVVEPQETDIGVVPESETLTPNKLVF
FT                   EKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADD
FT                   AATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYE
FT                   NPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAI
FT                   LAWNLARQQAFRNKTVTADNTLHNVFQLLQKK"
XX
SQ   Sequence 942 BP; 297 A; 190 C; 246 G; 209 T; 0 other;
     atggcatttg aactgaaatt agggcagata tatgaagtcg tccccgaaaa taatttgaga        60
     gttagagtag gggatgcggc acaaggaaaa tttagtaagg cgagtttctt aaagtacgtt       120
     aaggacggga cacaggcgga attaacggga atcgccgtag tgcccgaaaa atacgtattc       180
     gccacagcag ctttggctac agcggcgcag gagccaccta ggcagccacc agcgcaagtg       240
     gtggaaccac aggaaaccga tataggggta gtgccggaat ctgagactct cacaccaaat       300
     aagttggttt tcgagaaaga tccagacaag ttcttgaaga ctatgggcaa gggaatagct       360
     ttggacttga cgggagttac ccacaaaccg aaagttatta acgagccagg gaaagtatca       420
     gtagaggtgg caatgaagat taatgccgca ttgatggagc tgtgtaagaa ggttatgggc       480
     gccgatgacg cagcaactaa gacaaaattc ttcttgtacg tgatgcagat tgcttgcacg       540
     ttctttacat cgtcttcgac ggagttcaaa gagtttgact acatagaaac cgatgatgga       600
     aagaagatat atgcggtgtg ggtatatgat tgcattaaac aagctgctgc ttcgacgggt       660
     tatgaaaacc cggtaaggca gtatctagcg tacttcacac caaccttcat cacggcgacc       720
     ctgaatggta aactagtgat gaacgagaag gttatggcac agcatggagt accaccgaaa       780
     ttctttccgt acacgataga ctgcgttcgt ccgacgtacg atctgttcaa caacgacgca       840
     atactagcat ggaatttagc tagacagcag gcgtttagaa acaagacggt aacggccgat       900
     aacaccttac acaacgtctt ccaactattg caaaagaagt ag                          942
//