ID   HQ401016; SV 1; linear; genomic RNA; STD; VRL; 942 BP.
XX
AC   HQ401016;
XX
DT   23-DEC-2010 (Rel. 107, Created)
DT   04-MAR-2011 (Rel. 108, Last updated, Version 2)
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DE   Grapevine leafroll-associated virus 3 isolate Trincadeira-12 coat protein
DE   gene, complete cds.
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KW   .
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OS   Grapevine leafroll-associated virus 3
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus.
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RN   [1]
RP   1-942
RX   DOI; 10.1007/s00705-010-0878-7.
RX   PUBMED; 21153745.
RA   Gouveia P., Santos M.T., Eiras-Dias J.E., Nolasco G.;
RT   "Five phylogenetic groups identified in the coat protein gene of grapevine
RT   leafroll-associated virus 3 obtained from Portuguese grapevine varieties";
RL   Arch. Virol. 156(3):413-420(2011).
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RN   [2]
RP   1-942
RA   Gouveia P., Santos M.T., Eiras-Dias J.E., Nolasco G.;
RT   ;
RL   Submitted (11-OCT-2010) to the INSDC.
RL   Center for Biodiversity, Functional and Integrative Genomics, Universidade
RL   Do Algarve, Campus de Gambelas, Faro 8005-139, Portugal
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DR   MD5; 38277ff123a1a8944414a50f78d4c6dd.
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FH   Key             Location/Qualifiers
FH
FT   source          1..942
FT                   /organism="Grapevine leafroll-associated virus 3"
FT                   /host="Vitis vinifera; cultivar Trincadeira"
FT                   /isolate="Trincadeira-12"
FT                   /mol_type="genomic RNA"
FT                   /country="Portugal"
FT                   /collection_date="Feb-2009"
FT                   /db_xref="taxon:55951"
FT   CDS             1..942
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /db_xref="GOA:E7DXB1"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:E7DXB1"
FT                   /protein_id="ADT89784.1"
FT                   /translation="MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQ
FT                   AELTGIAVVPEKYVFATAALATAAQEPPRHPTAQAVEPPVTDVGVVPESETLTPNKLVF
FT                   EKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINGALMELCKKVMGADD
FT                   AATKTKFFLYVMQIACTFFTSSSTEFIEFDYIETDDGKKIYAVWVYDCIKQAAASTGYE
FT                   NPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAI
FT                   LAWNLARQQAFRNKTVTADNTLHNVFQLLQKK"
XX
SQ   Sequence 942 BP; 293 A; 187 C; 244 G; 218 T; 0 other;
     atggcatttg aactgaaatt agggcagata tatgaagttg tccccgaaaa taatctgaga        60
     gttagagtag gggatgcagc acaaggaaaa tttagtaagg cgagtttctt aaaatacgtt       120
     aaggacggga cgcaggcgga attaacggga atcgccgtag tgcccgaaaa gtatgtattc       180
     gccacagctg ctttggctac agcggcgcag gagccgccta ggcacccaac ggcacaagcg       240
     gtggaaccac ctgtaaccga tgtaggagtg gtgccggaat ctgagactct tacaccaaat       300
     aagttggttt tcgagaaaga tccagacaag ttcttgaaga ctatgggcaa gggaatagct       360
     ttggacttaa ctggagttac ccataaaccg aaagttatta acgagccagg gaaagtatcg       420
     gtagaagtag caatgaagat taatggcgca ttgatggagc tgtgtaagaa ggtcatgggc       480
     gccgatgacg cagcaactaa gacaaaattc ttcttgtacg tgatgcagat tgcctgcaca       540
     ttctttacat cgtcttcgac ggagttcata gagtttgact atatagaaac cgatgatgga       600
     aagaagatat atgcggtgtg ggtatatgac tgcatcaaac aagccgctgc ttcgacgggt       660
     tatgaaaacc cggtaaggca gtatctagca tactttacac caaccttcat cacggcgacc       720
     ttgaatggta aactagtgat gaatgagaag gttatggctc agcatggagt accaccgaaa       780
     ttctttccgt acacgataga ctgcgttcgt ccgacgtatg atctgttcaa taacgacgca       840
     atactagcgt ggaatttagc tagacagcag gcgtttagaa acaagacggt gacggccgac       900
     aacaccttgc ataacgtctt ccaactattg caaaagaaat ag                          942
//