ID HQ396465; SV 1; circular; genomic DNA; STD; VRL; 2566 BP. XX AC HQ396465; XX DT 11-APR-2011 (Rel. 108, Created) DT 11-APR-2011 (Rel. 108, Last updated, Version 1) XX DE Cleome golden mosaic virus isolate BA 05 segment DNA-A, complete sequence. XX KW . XX OS Cleome golden mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2566 RA Fonseca M.E.N., Boiteux L.S., Fernandes N.A.N., Costa A.F.; RT "Genomic organization of Cleome golden mosaic virus strain Porto Seguro RT Bahia (BA 05), a bipartite begomovirus endemic to the Northeast region of RT Brazil"; RL Unpublished. XX RN [2] RP 1-2566 RA Fonseca M.E.N., Boiteux L.S., Fernandes N.A.N., Costa A.F.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Laboratorio de Analise Genomica, Embrapa-Hortalicas, Km 09 Rodovia BR 060, RL Brasilia, DF 70359-970, Brazil XX DR MD5; e164a936585e6e0063ed22eb4f0901c3. XX FH Key Location/Qualifiers FH FT source 1..2566 FT /organism="Cleome golden mosaic virus" FT /segment="DNA-A" FT /host="Cleome" FT /isolate="BA 05" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="Jul-2007" FT /db_xref="taxon:858517" FT CDS 214..969 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:F5A3K8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:F5A3K8" FT /protein_id="AEB00552.1" FT /translation="MPKRDAPWRLSAGTTKVSRNANYSPGGATGPRPSRASAWVNRPMY FT RKPRIYRMYRSPDVPKGCEGPCKVQSYEQRHDISHTGKVLCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNLFDNEPSTATV FT KNDLRDRFQVMHRFYAKVTGGQYASNEQALVRRFWRVNNYVVYNHQEAAKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSISN" FT CDS complement(966..1367) FT /codon_start=1 FT /product="Ren" FT /note="AC3" FT /db_xref="GOA:F5A3K9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:F5A3K9" FT /protein_id="AEB00554.1" FT /translation="MNSRTGERHQLCLRRRMACIHGRYQIPCISGYTTWRTSCTAETRI FT YHVQIRFNHSVRRALALHMAFLNFQVWTVSVTASGQTYLNRFKHLVLMYLDQLGVISLN FT NVIRAVSFATDRSYVSHVHENHSIKFKFY" FT CDS complement(1111..1503) FT /codon_start=1 FT /product="Trap" FT /note="AC2" FT /db_xref="GOA:F5A3L0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:F5A3L0" FT /protein_id="AEB00553.1" FT /translation="MRGSSSSNPPCIKAQHKAAKRRAIRRRRIDLTCGCTIYIHLNCHS FT NEFTHRGTSSAVPQAENGVYTWEISNPLYFRIHDVEDVLHSRDEDIPRPDTVQPQREES FT IGSPHGLSQLPSLDSLGDSFWADLFK" XX SQ Sequence 2566 BP; 623 A; 600 C; 671 G; 672 T; 0 other; accggatggc cgcgcgatca aaaagtggcc cccctctccg taaatcgcgg cgcgttgtcg 60 ggttcgtggt cccccacgag tatcttggac tttgtatggc ccaataacaa ttgggcttga 120 aagccaatat atgaaaatat acttggccgc taagttgata aagttgtata taaggggacc 180 acattcaatg ttccccgcat tctgttgtac agaatgccta agcgggatgc cccatggcgc 240 ttgtcggcgg gtaccaccaa ggttagccgc aatgctaact actcccctgg tggagctacg 300 ggccctcgac caagcagggc ctctgcttgg gttaacaggc ccatgtatag gaagccgcgt 360 atttaccgga tgtaccgatc acccgatgtg cccaaagggt gcgaaggccc atgcaaggtc 420 cagtcatacg agcagcgtca cgatatatcc cacaccggga aggtgctatg catatcggac 480 gttacccgag gtaacggtat aactcaccgc gtcggtaagc ggttttgcgt taagtctgtg 540 tacatactag gcaagatttg gatggacgag aacataaagc tcaagaacca cacgaatagt 600 gtgatgttct ggctagttag ggataggaga ccgtatggga cgcctatgga ttttggacag 660 gttttcaacc tgtttgacaa cgagcctagc actgctacgg tgaagaacga tcttcgcgat 720 cgttttcagg tgatgcacag gttctacgcc aaggtgaccg gagggcaata tgcgagcaac 780 gaacaggcgc tagtgcggcg tttctggagg gtcaataact atgtggtgta caaccaccaa 840 gaggcggcga agtacgagaa ccatacggag aacgccctgt tattgtatat ggcatgtact 900 catgcctcta accccgtgta tgcgacgctt aagattcgaa tctatttcta cgattcgata 960 tcaaattaat aaaatttgaa ttttattgaa tggttctcat gtacatggga tacatacgat 1020 cgatcagttg cgaaactgac ggccctgatt acattgttaa ggctaataac gcctagctga 1080 tcaagataca tgagaactag atgtttaaac ctatttaaat aggtctgccc agaagctgtc 1140 accgagactg tccagacttg gaagttgaga aaggccatgt ggagagccaa tgctctcctc 1200 acgctgtggt tgaaccgtat ctggacgtgg tatatcctcg tctctgctgt gcaggacgtc 1260 ctccacgtcg tgtatcctga aatacagggg atttgatatc tcccatgtat acacgccatt 1320 ctccgcctga ggcacagctg atgacgttcc cctgtgcgtg aattcattgc tatggcagtt 1380 aaggtggatg tatatggtac atccacaggt gaggtcgata cgtctacggc gaatggctct 1440 ccgcttcgcg gccttgtgtt gagctttgat acagggggga ttcgaggaag acgaacctcg 1500 cattgtgaag ggtccaggct ctgagtgcag aattctcctc tttctcgagg aagtctttat 1560 agctggaccc ttcaccagga ttgcaaagca cgattgatgg gataccgcct ttaatttgaa 1620 caggctttcc atatttgcag ttgctttgcc agtctcgttg ggccccaacg agctctttcc 1680 agtgctttag ctttaggtat tgcggtggca acgtcatcaa tgacgttgta tgcgacctcg 1740 tgttgagtag accctcggat tgaaatcgag gtgtccactg agataattgt gtggaccttt 1800 agttcgcgcc cacgttgttt accacggcct cgaatcccct tccacgatta acgacaatgg 1860 acgataacta ttattatgtt caggccgcgc agcggcacac gagccgaagt actcttcggc 1920 ccagagacgc atctcgtcag ggacgttaat aaacgaggag atagggaacg gagggaccca 1980 cggatcatga gccttggaga aaatcctgtc cagattactg gacagattgt gatattggaa 2040 gagaaacttc tccggcagtt tctctctgac gatttgcatt gcttcttctt tcgaagaagc 2100 atttaacgcc tctgctgcag cgtcgttagc cgtctgctga cctcctctag cagatcgtcc 2160 gtcgatctgg aattgacccc attcgaggat atcaccgtcc ttgtcgaggt agtgacttga 2220 cgtcggagct agatttagct ccctgaacat tcggatggaa atgtgttgac ctggtagggg 2280 acggtatatc gaagaatcgg ttatttgtac agttgtattt cccttcaaac tggataagca 2340 cgtggagatg aggctcccca ttctcgtgga gctctcttgc gaccttgatg aatttcttgt 2400 ttgttggggg gaaaaagagc ccttccgtgg cattttggta aataagagtg ttcccccgat 2460 tgagctcgct ctcaaagtct ctatgaatcg ggggaactgg gggaacattt atagtagaag 2520 gtccttaggc tctaaaggcc acgtgtcggc catccgttat aatatt 2566 //