ID   HQ394212; SV 1; linear; genomic RNA; STD; VRL; 1798 BP.
XX
AC   HQ394212;
XX
DT   17-APR-2011 (Rel. 108, Created)
DT   17-APR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Southern rice black-streaked dwarf virus isolate YJ-M segment S10, complete
DE   sequence.
XX
KW   .
XX
OS   Southern rice black-streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1798
RA   Yin Y.-Y., Wang D., Dong J.-H., Zhang Z.-K.;
RT   "Molecular identification of maize rough dwarf disease in Lijiang (Yunnan,
RT   China)";
RL   Unpublished.
XX
RN   [2]
RP   1-1798
RA   Yin Y.-Y., Wang D., Dong J.-H., Zhang Z.-K.;
RT   ;
RL   Submitted (12-OCT-2010) to the INSDC.
RL   Institute of Biotechnology and Germplasma Resources, Yunnan Academy of
RL   Agricultural Sciences, Xueyun Road No. 9, Kunming, Yunnan 650223, China
XX
DR   MD5; a4a26dea450e5a102ac5368c39b1b69e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1798
FT                   /organism="Southern rice black-streaked dwarf virus"
FT                   /segment="S10"
FT                   /host="maize"
FT                   /isolate="YJ-M"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="17-Sep-2009"
FT                   /db_xref="taxon:519497"
FT   CDS             22..1695
FT                   /codon_start=1
FT                   /product="p10"
FT                   /note="coat protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:F5A193"
FT                   /protein_id="AEB40351.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNSLFHE
FT                   SNIVKSPHIASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKEHIQSYFRNEHQ
FT                   PIFQTLTNNNLSDEFLGVTTFGLSLFATSKLDAEQIERVQIETLTEGNVTLKPFSADGL
FT                   EVILDDSYIGIIGKISGLEVHKLLDKCCREVPAQMGILTDEVKLLIRSGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQYSRQMFEKLNLFFNISLSIIPVSALKTIHVFEKELGALDADK
FT                   SLLEQTWSGVSSFIETCKVKTKVKDEDQDEYELAGLSALRKGVDGNSVSSPYNDKKFIE
FT                   WYSKTFAKIEKGSSLRKTEIEDKNTSGTSNITKQVKIHFPVQYFDEVKSNGHEKSVTVI
FT                   TNKGEMSLESYRKIGEILSAIWKRGKALAAPCIDYIKLGVEKAYHLAPVIMKKYNLTID
FT                   DIIHFIEIGPSYLAKLDKIDDWSLIAKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKADRDRLIKKATTANSSTSNSNSEHGQKIVLNKVTR"
XX
SQ   Sequence 1798 BP; 613 A; 318 C; 316 G; 551 T; 0 other;
     aagttttttt cctcatccat aatggctgac ataagacttg acatagcgcc cgatcttatc        60
     cataatggtg tgcctcaaag actttcagat acgataattc taaacaaccg accaacaatc       120
     acacttctgt ctcacttcaa ctctcttttt cacgaatcaa acattgtcaa atcaccccac       180
     atcgcgtcat ctcaaactac tgttaattta tacattcgta agcatttatt gactcgactt       240
     catgatagat tacaaactgt cgaaaccagt actctaccaa acattactca acttaaagaa       300
     catattcaaa gttatttccg taatgaacat caacctattt tccaaaccct gactaacaat       360
     aatcttagtg atgaattttt aggtgtaact acttttggtt taagtctatt cgcaacttca       420
     aagttggatg cagaacaaat agaacgagta caaattgaga ccctaactga aggaaacgtt       480
     acacttaaac cattctccgc tgacggttta gaagtaattt tagatgatag ttacatcgga       540
     ataattggaa aaatttctgg tttagaagta cataaattgc tcgataaatg ttgtcgtgaa       600
     gttcctgctc aaatgggaat attaactgac gaagttaaac ttttaatacg ttccggaaaa       660
     ttaagaattg acggtggata cgatttcaat tgtcctgcta gtacaacaga cgtgacgcac       720
     tatggcggtt atgaccaata ttcgagacaa atgtttgaaa aattgaattt gttctttaat       780
     atcagtttga gcattattcc tgtttctgca cttaaaacta ttcatgtatt tgagaaagaa       840
     ctaggtgctt tagatgctga caaatcactt ttagaacaaa catggagcgg agtctcctca       900
     tttattgaaa cctgtaaagt aaaaactaaa gttaaagatg aagatcaaga tgagtacgaa       960
     ctagctggac tgtctgcact tagaaaagga gtcgatggta attctgtatc tagcccttac      1020
     aatgataaga aattcatcga atggtattct aagacgtttg ctaaaataga gaaaggttca      1080
     tcgttgcgta agactgaaat tgaagacaaa aatacgtccg gtacttcaaa cataacaaag      1140
     caagttaaaa ttcattttcc tgttcagtat ttcgatgaag tcaaatctaa cggtcatgaa      1200
     aaaagtgtta ctgtaatcac taataaaggt gaaatgtcat tggaatctta ccgaaagata      1260
     ggtgaaatat taagtgcgat ctggaaacgt ggtaaggcat tagctgctcc ctgcatcgat      1320
     tacatcaaac ttggtgtcga aaaagcttat cacttagctc ctgtaatcat gaagaaatat      1380
     aatttaacta ttgatgatat aattcatttt attgaaattg gtccttcata cttagcgaaa      1440
     ttggataaaa ttgatgattg gtccttaatt gcaaaattga ttattaccag tgttttgcca      1500
     aacatcattc aagcggtgta taaaacagat cctagcaata atgttatgaa ttcagtcatt      1560
     attagcagag ctaacaattt attgaaggcg gatcgcgatc gtctaattaa gaaagctacc      1620
     actgcaaatt catctaccag taattcaaat tcagaacatg gtcaaaagat tgtgttaaat      1680
     aaagtcacca gatgataatt gaggtttcat cattagcgcg actagttcag tgctgtgtgg      1740
     tcttcagttc attatcgacg ccgagtgacg acggctaggg ggaaattcag ctattgtc        1798
//