ID HQ393477; SV 1; circular; genomic DNA; STD; VRL; 2782 BP. XX AC HQ393477; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl Sao Paulo virus isolate SPLCSPV-[BR:AlvM:09], DE complete genome. XX KW . XX OS Sweet potato leaf curl Sao Paulo virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2782 RX DOI; 10.1007/s00705-011-1016-x. RX PUBMED; 21594599. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Ribeiro S.D., RA Resende R.O., Moriones E., Navas-Castillo J.; RT "A novel monopartite begomovirus infecting sweet potato in Brazil"; RL Arch. Virol. 156(7):1291-1294(2011). XX RN [2] RC Publication Status: Online-Only RP 1-2782 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [3] RP 1-2782 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [4] RP 1-2782 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; ee66be668830f1bf5e9f67b752645a9e. XX FH Key Location/Qualifiers FH FT source 1..2782 FT /organism="Sweet potato leaf curl Sao Paulo virus" FT /host="Ipomoea batatas" FT /strain="Sao Paulo" FT /isolate="SPLCSPV-[BR:AlvM:09]" FT /mol_type="genomic DNA" FT /country="Brazil:Sao Paulo" FT /lat_lon="22 S 51.27 W" FT /collected_by="Amarilis Ros Golla" FT /collection_date="2009" FT /clone="SP71Bam1" FT /db_xref="taxon:994388" FT CDS 90..443 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:F2X8Z7" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:F2X8Z7" FT /protein_id="ADZ96681.1" FT /translation="MDLWDPLQNPLPETLYGLRCMLSVKYLQSISAKYEPGTLGFELCS FT DLIRILRVRHYDRANARYAEISSVWGDTGKTETELRDRYRALHWECCPNCCPKLCPGFK FT KRTDEEKEGGSNP" FT CDS 256..1020 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:F2X8Z8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:F2X8Z8" FT /protein_id="ADZ96682.1" FT /translation="MTGRMRVTRRFHPYGGTPARRRLNFETAIVPYTGNAVPIAARSYV FT PVSRSVRMKRKKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGK FT KVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFVQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFNGLYHHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1017..1454) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:F2X8Z9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:F2X8Z9" FT /protein_id="ADZ96683.1" FT /translation="MDSRTGESLSHAQITRAAEFFTNPMSVGQTAPFHLRLLYVHTNNI FT NTKKIMKFQLQVNHRNRREIGFQKIFLQFRIITTRLTGVIHSWTGILTRLKWRICNSLV FT SLGYFSLLNLVYVIRHLPQECLWVEEVDVIDCEDDIKLLLY" FT CDS complement(1168..1617) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:F2X900" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:F2X900" FT /protein_id="ADZ96684.1" FT /translation="MSTPPSGYKRKCPQQEPIHEAAKKKQRKAPEPRTRIVWKGCGCSA FT FITNECKYQHGFTHRGITKSCTDYESSRILHQPHVCGSDCSVPPAVAVCTYKQHKHKED FT HEVPASSQPQEQEGNWIPKDISPVPNHNNASDWCYSQLDWYFDTP" FT CDS complement(1526..2620) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:F2X901" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F2X901" FT /protein_id="ADZ96685.1" FT /translation="MPRAGRFNIKAKNYFLTYPQCSLSKEETLQQLLQLQTPTNKKYIK FT ICRELHEDGQPHLHVLLQFEGNYQCTNQRFFDLVSPTRSAHFHPNIQRAKSSSDVKSYV FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGNKEAALQIIREKLPEKFIFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKFWLDKPEQEALKIWAVKNAVFCDVDTPF FT WIQEEVSPTGANSRGGQEEAEESS" FT CDS complement(2206..2469) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F2X902" FT /protein_id="ADZ96686.1" FT /translation="MKMGNLISMCFSSSRGITSARIKDSSTWSLQPGQHISTQTFRERN FT PAPTSSPTSIRMETLWNGENSRSTADLLEEASRLLMTQQQRP" XX SQ Sequence 2782 BP; 729 A; 578 C; 645 G; 830 T; 0 other; accggtgccc gcgttcgttt tatggtgggc cccacacggc atctttaatc attaaaaggc 60 gcgtcaatta cgagactttg tcgccaagta tggatttgtg ggatcctttg cagaacccat 120 tacctgagac tttatacggt ctacggtgta tgctttctgt gaaatacctg cagagtattt 180 cggcgaaata cgagcctgga accctagggt tcgagctttg ctccgattta atccgcattt 240 tgcgggttcg tcactatgac agggcgaatg cgcgttacgc ggagatttca tccgtatggg 300 gggacaccgg caagacggag actgaacttc gagaccgcta tcgtgcctta cactgggaat 360 gctgtcccaa ttgctgcccg aagctatgtc ccggtttcaa gaagcgtacg gatgaagaga 420 aagaaggggg atcgaatccc taaggggtgt gtgggtccct gtaaggtaca ggattacgag 480 ttcaagatgg atgtcccgca tagtggtacg tttgtttgtg tctcagattt tactcgtggt 540 actgggctta cccaccgatt aggtaagaag gtgtgtatta agtccatggg tattgacggt 600 aaggtctgga tggacgacaa cgtcgccaag agggaccata ccaacatcat tacttactgg 660 ttgattcgag ataggaggcc caataaggac cctctgacgt ttgtacaggc ctttaccatg 720 tatgataacg aacccactac tgctaagatc cgaatggatc tgagagatag aatgcaagtg 780 ttgaagaaat tttctgttac tgtatctggt ggtccttaca atcacaagga gcaggctttg 840 gttaggaagt tttttaatgg attataccat catgttacct ataatcacaa ggaagaagct 900 aagtacgaaa accatttgga aaatgctttg atgttgtatt cagctagcag tcatgctagt 960 aatcctgtgt atcagactct gcgttgcagg gcttatttct atgattcgca taataattaa 1020 taaagaagta gttttatatc atcttcgcaa tctattacat ccacttcttc tacccacaaa 1080 cattcttgtg gtaaatgtct aattacataa actaaattca acaatgaaaa ataacctaaa 1140 ctaactaagc tattacaaat tcgccattta aggcgtgtca aaataccagt ccaactgtga 1200 ataacaccag tcagacgcgt tgttatgatt cggaactgga gaaatatctt ttggaatcca 1260 atttccctcc tgttcctgtg gttgacttga agctggaact tcatgatctt ctttgtgttt 1320 atgttgtttg tatgtacata cagcaaccgc aggtggaacg gagcagtctg acccacagac 1380 atggggttgg tgaagaattc tgctgctctc gtaatctgtg catgacttag tgattcccct 1440 gtgcgtgaat ccatgctggt acttgcactc gttggttatg aacgctgagc agccgcaacc 1500 tttccacact atcctggtcc ttggttcagg agctttcctc tgcttcttct tggccgcctc 1560 gtgaattggc tcctgttggg gacacttcct cttgtatcca gaagggggtg tcgacatcac 1620 agaaaactgc gttctttacc gcccaaattt taagtgcttc ttgctctggc ttgtccagcc 1680 agaatttaaa tgaagaccct tctcctggat tgcagaggaa gatagtggga attccacctt 1740 taatttgaac tggctttccg tatttacagt tgctttgcca gtccttctgg gcccccatga 1800 attctttaaa gtgctttagg tattgggggt tgacgtcatc aatgacgtta taccaagcac 1860 tgttgctata cactttggga ctcaagtcca ggtgtccaca caaataatta tgaggaccta 1920 acgaccgagc ccatactgtt tttcctattc tacttgggcc ttctataaca atactaatgg 1980 gcctatccgg ccgcgcagcg gaatccatga cattctcagc agcccagtcg ctgataatgt 2040 caggtacatt attgaaagaa gaagaagaaa aaggggaaga atacacagaa ggaggaggag 2100 aaaaaatcct atctaaattt gaaactaaat tatgatattg aaatataaat ttttcaggaa 2160 gtttttccct gattatttgt aacgcagctt ctttattgcc tgcatttagg gcctctgctg 2220 ctgcgtcatt agcagtctgc tggcctcctc tagcagatct gccgtcgacc tggaattctc 2280 cccattccaa agtgtctcca tccttatcga cgtaggactt gacgtcggag ctggatttcg 2340 ctctctgaat gtttgggtgg aaatgtgctg accgggttgg agagaccaag tcgaagaatc 2400 tttgattcgt gcactggtaa ttcccctcga actggagaag cacatggaga tgaggttgcc 2460 catcttcatg cagttctctg catatcttaa tatatttttt atttgtaggg gtttggagtt 2520 gaagaagctg ctgaagagtt tcttctttgg atagagaaca ttggggataa gtgagaaaat 2580 agttttttgc tttgatatta aaacgcccgg ctcttggcat tttgactaag tcaaatggtg 2640 gacacaaaaa ctctatatga attggtggaa cggtggacaa tttatatgtg tccaccaaat 2700 ggcaaattgg taatttaggt aactttaatt tgaatggtaa gatcctattg gtcctccata 2760 aagcgggcac cgtattaata tt 2782 //