ID HQ393475; SV 1; circular; genomic DNA; STD; VRL; 2827 BP. XX AC HQ393475; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-US[BR:AM4:09], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2827 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2827 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2827 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 6e133f22a44ab43821256634d1ab4ef6. XX FH Key Location/Qualifiers FH FT source 1..2827 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="USA" FT /isolate="SPLCV-US[BR:AM4:09]" FT /mol_type="genomic DNA" FT /country="Brazil:Sao Paulo" FT /lat_lon="21.53 S 51.2 W" FT /collected_by="Amarilis Ros Golla" FT /collection_date="2009" FT /clone="SP130Bam4" FT /db_xref="taxon:100755" FT CDS 70..468 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:E5G5V3" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:E5G5V3" FT /protein_id="ADZ96669.1" FT /translation="MITLLYKDQSGFRAWAPRMEQLWDPLQNPLPDTLYGFRCMLSVKY FT LQSILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAEISSIWGETGKTEAELRDSYR FT ALHWECCPNCCPKLCPGFKRRPDEEKEG" FT CDS 293..1057 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:D4HSB4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D4HSB4" FT /protein_id="ADZ96670.1" FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRRRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTTYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1073..1507) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEY2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEY2" FT /protein_id="ADZ96671.1" FT /translation="MDSRTGESLSHAQTTRALEFDTNPMSVGRTAPFHLRIMYVHESTQ FT GRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNELAN FT LGFFSLVNLVFVVRYLPRVCSWIDEVDNVDCNDDVKILLY" FT CDS complement(1224..1670) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:D4HSC2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D4HSC2" FT /protein_id="ADZ96672.1" FT /translation="MSNPLSGYKRKCPIQEPLHTEAKKAKRKVPEQRTRIVWKGCGCSA FT FITTTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTVPSQNYVCPREHTGENHP FT QIPAEGQLQGKEATGIPQDLPPIPDLDDPSNWCYSQLDWYFGTP" FT CDS complement(1579..2673) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:D4HSC3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D4HSC3" FT /protein_id="ADZ96673.1" FT /translation="MAPPKRFKIQAKNYFITYPRCSLSKEDCLAQLLNIQTPTNKKYIH FT VARELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPNRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTITWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQFH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WVQEEVSHSGATAHRGEEGQEESS" FT CDS complement(2259..2516) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J9PE96" FT /protein_id="ADZ96674.1" FT /translation="MGNLTSMCLCNSKANSSAQIADSSIWSHRTDRITFTPTSRELNPR FT PMSSPTLTRTGIPSPGVNSRSTADLLEEASRLLMTQPQRL" XX SQ Sequence 2827 BP; 743 A; 597 C; 683 G; 804 T; 0 other; accggtgccg ccgcgccctt taaagtgggc cccataaagg gaccacgcgt cttttccgta 60 ctgtctttaa tgattacttt gctttataag gaccaatcag gtttccgtgc ttgggcgcca 120 agaatggagc agttgtggga ccctttgcag aacccactcc cggatacttt atacggtttt 180 aggtgtatgc tatccgtaaa atacttgcag agtattttga agaaatacga gccaggaacc 240 ttagggttcg agctctgttc ggagttaatc cgtatattca gggtcaggca gtatgacagg 300 gcgaattccc gtttcgcgga gatttcatcc atatgggggg agaccggtaa gacggaggct 360 gaacttcgag acagctatcg tgccctacac tgggaatgct gtcccaattg ctgcccgaag 420 ctatgtcccg gtttcaagag gcgtccggat gaagagaagg aggggtgacc gcatcccgaa 480 gggatgtgtc ggtccctgta aggtccagga ctatgagttc aagatggacg ttccccacac 540 gggaacgttt gtctgtgtct cggattttac taggggaact gggcttaccc atcgactggg 600 taagcgtgtt tgtgtgaagt ccatgggtat agatggtaag gtctggatgg atgacaatgt 660 ggccaagaga gatcacacca atatcatcac gtattggctg attcgtgaca ggaggcccaa 720 taaggatccg cttaactttg gccagatctt cacgacgtac gacaatgagc ccactactgc 780 taagatccga atggatctga gagatagaat gcaggtcttg aagaagttct cggttacagt 840 ttcaggaggt ccatacagcc acaaggagca ggccttaatt aggaagtttt ttaagggttt 900 gtataatcat gttacttaca atcacaagga agaagctaag tatgagaatc aattagagaa 960 tgcacttatg ttgtatagtg ctagtagtca tgctagtaat cccgtgtatc agaccctgcg 1020 ttgcagggct tatttctatg attcgcataa taattaataa aattatattt tattaataga 1080 gtaatatctt tacatcatca ttacaatcta cattatctac ttcatctatc caagaacata 1140 ctcttggaag atatctaaca acgaaaacta aattaactaa actaaaaaat cctaaatttg 1200 ctaattcatt acatatacgc catttaaggc gttccaaaat accagtccaa ctgtgaatag 1260 caccagttag acgggtcgtc aagatccgga attggaggaa gatcttgtgg aatcccagtt 1320 gcctcctttc cctgtagttg accctcagct ggaatttgag gatggttctc ccctgtgtgc 1380 tctcgtggac atacataatt ctgagatgga acggtgcagt ccgacccaca gacatggggt 1440 tggtgtcgaa ttctagtgct ctcgtagtct gagcatgact tagtgattcc cctgtgcgtg 1500 aatccatgct ggtacttgca ggttgtggtg atgaaggctg aacagccgca acccttccac 1560 actatcctcg tcctctgttc aggaactttc ctcttggcct tcttcgcctc tgtgtgcagt 1620 ggctcctgaa tgggacactt cctcttgtac ccagaaaggg gattggacat cgcagaatat 1680 agcgtttgct gttgcccaat ttttaagtgc tccttgctct ggtttgtcca accagagttt 1740 aaatgaggag ccctctcctg gattgcagag gaagatagtg ggaattccac ctttaatttg 1800 aactggcttt ccgtatttac agttggattg ccagtccttc tgggccccca tgaattcctt 1860 aaagtgcttt aggtattggg ggttgacgtc atcaatgacg ttataccaag cactgttgct 1920 gtatacttta gggcttagat ctaaatgccc acacaaataa ttatgaggcc ccaaagacct 1980 ggcccatact gttttgccta ttctgcttgg gccttcaata acaatggata tgggtctatc 2040 cggccgcgca gcggaatcca tgacattttc agcggcccag tcgctgataa tgtcaggaac 2100 ggcattgaaa gaagaagatg aaaaaggaga agaatataca gaaggaggag gagaaaaaat 2160 cctatctaaa ttactaacta aattgtgaaa ttgaaacaaa tatttttcag gaagtttctc 2220 cctaattatt tgcaacgcag cttctttaga acctgcgttt agagcctctg cggctgcgtc 2280 attagcagtc tgctggcctc ctctagcaga tctgccgtcg acctggaatt caccccaggt 2340 gatggtatcc ccgtccttgt caacgtagga cttgacatcg gacgaggatt tagctccctg 2400 gatgttgggg tgaaagtgat tcgatctgtt cggtgagacc agatcgaaga atctgctatt 2460 tgtgcagacg aatttgcctt cgaattgcac aagcacatgg aggtgaggtt ccccatcctc 2520 gtgcagttct cttgctacgt gtatgtattt tttgttggtg ggtgtttgga tatttaggag 2580 ttgggctagg cagtcctctt ttgagagaga acagcgtgga taagtaataa aataattttt 2640 ggcctgaatt ttaaaacgtt ttggaggagc catttggaga cacgcataag ttcaaatgaa 2700 ttggagactg gagacaatat atagtatgtc tccaaatggc attctggtaa tttagaagat 2760 ccttttagct ttaattcaaa ttccgacaac tctgggtcca ccaaaaggcg ggcaccgtat 2820 taatatt 2827 //