ID HQ393473; SV 1; circular; genomic DNA; STD; VRL; 2837 BP. XX AC HQ393473; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-SP[BR:AlvM:09], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2837 RX DOI; 10.1007/s00705-011-1016-x. RX PUBMED; 21594599. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Ribeiro S.D., RA Resende R.O., Moriones E., Navas-Castillo J.; RT "A novel monopartite begomovirus infecting sweet potato in Brazil"; RL Arch. Virol. 156(7):1291-1294(2011). XX RN [2] RC Publication Status: Online-Only RP 1-2837 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [3] RP 1-2837 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [4] RP 1-2837 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; a684d8aeb6466a55b5a8cd0d1fc99fff. XX FH Key Location/Qualifiers FH FT source 1..2837 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="Sao Paulo" FT /isolate="SPLCV-SP[BR:AlvM:09]" FT /mol_type="genomic DNA" FT /country="Brazil:Sao Paulo" FT /lat_lon="22 S 51.27 W" FT /collected_by="Amarilis Ros Golla" FT /collection_date="2009" FT /clone="SP71Sac11" FT /db_xref="taxon:100755" FT CDS 126..470 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:F2X8X3" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:F2X8X3" FT /protein_id="ADZ96657.1" FT /translation="MEQLWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYEPGTLGFELC FT SELIRIFRVRQYDRANSRFAEISSIWGETGKTEAELRDSYRALHWECCPNCCPKLCPGF FT KRRPDEEKEG" FT CDS 295..1059 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:D4HSB4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D4HSB4" FT /protein_id="ADZ96658.1" FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRRRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTTYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1075..1509) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:D4HSD3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D4HSD3" FT /protein_id="ADZ96659.1" FT /translation="MDSRTGESLSHAQTTRALEFDTNPMSVGRTAPFHLRIMYVHESTQ FT GRTILKFQLRVNYRERRQLGFHKIFLQFRIVTTRLTGAIHSWTGILERLKWRICNELAN FT LGFFSLVNLVFVVRYLPRVCSWIDEVDTVDCNDDVKILLY" FT CDS complement(1226..1672) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:D4HSD4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D4HSD4" FT /protein_id="ADZ96660.1" FT /translation="MSNPLSGYKRKCPIQEPLHTEAKKAKRKVPEQRTRIVWKGCGCSA FT FITTTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTVPSQNYVCPREHTGENHP FT QIPAEGQLQGKEATGIPQDLPPIPDRDDPSNWCYSQLDWYFGTP" FT CDS complement(1581..2675) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:F2X8X7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F2X8X7" FT /protein_id="ADZ96661.1" FT /translation="MPRAGRFNIKAKNYFLTYPQCSLSKEETLQQLLQLQTPTNKKYIK FT ICRELHEDGQPHLHVLLQFEGNYQCTNQRFFDLVSPTRSAHFHPNIQRAKSSSDVKSYV FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGNKEAALQIIKEKLPEKFIFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKIWATANAIFCDVQSPF FT WVQEEVSHSGATAHRGEESQEESS" FT CDS complement(2261..2524) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F2X8X8" FT /protein_id="ADZ96662.1" FT /translation="MKMGNLISMCFSSSRGITSARIKDSSTWSLQPGQHISTQTFRERN FT PAPTSSPTSIRMETLWNGENSRSTADLLEEASRLLMTQQQRP" XX SQ Sequence 2837 BP; 743 A; 591 C; 681 G; 822 T; 0 other; accggtgccc gccgcgccct tttaaagtgg gccctacaat gggaccacgc gtctttgccg 60 tactgtcttt aatgattact ttgctttata aggaccaatc aggtttccgt gcttgggcgc 120 caagaatgga gcagttgtgg gaccctttgc agaacccact cccggatact ttatacggtt 180 ttaggtgtat gctatccgta aaatacttgc agagtatttt gaagaaatac gagccaggaa 240 ccttagggtt cgagctctgt tcggagttaa tccgtatatt cagggtcagg cagtatgaca 300 gggcgaattc ccgtttcgcg gagatttcat ccatatgggg ggagaccggt aagacggagg 360 ctgaacttcg agacagctat cgtgccctac actgggaatg ctgtcccaat tgctgcccga 420 agctatgtcc cggtttcaag aggcgtccgg atgaagagaa ggaggggtga ccgcatcccg 480 aagggatgtg tcggtccctg taaggtccag gactatgagt tcaagatgga cgttccccac 540 acgggaacgt ttgtctgtgt ctcggatttt actaggggaa ctgggcttac ccatcgcctg 600 ggtaagcgtg tttgtgtgaa gtccatgggt atagatggta aggtctggat ggatgacaat 660 gtggccaaga gagatcacac caatatcatc acgtattggc tgattcgtga caggaggccc 720 aataaggatc cgcttaactt tggccagatc ttcacgacgt acgacaatga gcccactact 780 gctaagatcc gaatggatct gagagataga atgcaggtct tgaagaagtt ctcggttaca 840 gtttcaggag gtccatacag ccacaaggag caggccttaa ttaggaagtt ttttaagggt 900 ttgtataatc atgttactta caatcacaag gaagaagcta agtatgagaa tcaattagag 960 aatgcactta tgttgtatag tgctagtagt catgctagta atcccgtgta tcagaccctg 1020 cgttgcaggg cttatttcta tgattcgcac aataattaat aaaattatat tttattaata 1080 gagtaatatc tttacatcat cattacaatc tacagtatct acttcatcta tccaagaaca 1140 tactcttgga agatatctaa caacgaaaac taaattaact aaactaaaaa atcctaaatt 1200 tgctaattca ttacatatac gccatttaag gcgttccaaa ataccagtcc aactgtgaat 1260 agcaccagtt agacgggtcg tcacgatccg gaattggagg aagatcttgt ggaatcccag 1320 ttgcctcctt tccctgtagt tgaccctcag ctggaatttg aggatggttc tcccctgtgt 1380 gctctcgtgg acatacataa ttctgagatg gaacggtgca gtccgaccca cagacatggg 1440 gttggtgtcg aattctagtg ctctcgtagt ctgagcatga cttagtgatt cccctgtgcg 1500 tgaatccatg ctggtacttg caggttgtgg tgatgaaggc tgaacagccg caacccttcc 1560 acactatcct cgtcctctgt tcaggaactt tcctcttggc tttcttcgcc tctgtgtgca 1620 gtggctcctg aatgggacac ttcctcttgt acccagaaag gggattggac atcgcagaat 1680 atagcgtttg ctgttgccca aattttgagt gctccttgct ctggtttgtc caaccagagt 1740 ttaaatgagg agccctctcc tggattgcag aggaagatag tgggaattcc acctttaatt 1800 tgaactggct ttccgtattt acagttggat tgccagtcct tctgggcccc catgaattcc 1860 ttaaagtgct ttaggtattg ggggttgacg tcatcaatga cgttatacca agcactgttg 1920 ctgtatactt tagggcttag atctaaatgc ccacacaaat aattatgagg ccccaaagac 1980 ctggcccata ctgttttgcc tattctgctt gggccttcaa taacaatgga tatgggtcta 2040 tccggccgcg cagcggaatc catgacattt tcagcggccc agtcgctgat aatgtcaggt 2100 acattattga aagaagaaga agaaaaaggg gaagaatata cagaaggagg aggagaaaaa 2160 atcctatcta aatttgaaac taaattatga tattgaaata taaatttttc aggaagtttt 2220 tccttgatta tttgtaacgc agcttcttta ttgcctgcat ttagggcctc tgctgctgcg 2280 tcattagcag tctgctggcc tcctctagca gatctgccgt cgacctggaa ttctccccat 2340 tccaaagtgt ctccatcctt atcgacgtag gacttgacgt cggagctgga tttcgctctc 2400 tgaatgtttg ggtggaaatg tgctgaccgg gttggagaga ccaagtcgaa gaatctttga 2460 ttcgtgcact ggtaattccc ctcgaactgg agaagcacat ggagatgagg ttgcccatct 2520 tcatgcagtt ctctgcatat cttaatatat tttttatttg taggggtttg gagttgaaga 2580 agctgctgaa gagtttcttc tttggataga gaacattggg gataagtgag aaaatagttt 2640 tttgctttga tattaaaacg cccggctctt ggcattttga ctaagtcaaa tggtggacac 2700 aaaaactcta tatgaattgg tggaacggtg gacaatttat atgtgtccac caaatggcaa 2760 attggtaatt taggtaactt taatttgaat ggtaagatcc tattggtcct ccataaagcg 2820 ggcaccgtat taatatt 2837 //