ID HQ393468; SV 1; circular; genomic DNA; STD; VRL; 2827 BP. XX AC HQ393468; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-PE[BR:MP6:09], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2827 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2827 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2827 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 9730f9bf7b215b2451156458ea7d322e. XX FH Key Location/Qualifiers FH FT source 1..2827 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="Pernambuco" FT /isolate="SPLCV-PE[BR:MP6:09]" FT /mol_type="genomic DNA" FT /country="Brazil:Rio Grande do Sul" FT /lat_lon="30.21 S 51.28 W" FT /collected_by="Leonardo Cunha de Albuquerque" FT /collection_date="2009" FT /clone="RS33Bam27" FT /db_xref="taxon:100755" FT CDS 97..468 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:H9CJY1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:H9CJY1" FT /protein_id="ADZ96627.1" FT /translation="MLFQSWSPSMAELWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 293..1057 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J7EPK6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J7EPK6" FT /protein_id="ADZ96628.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHRGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFDQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1073..1507) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEJ7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEJ7" FT /protein_id="ADZ96629.1" FT /translation="MDSRTGESLNHAQTMRALEFDTNPMSAGRTAPFHLRLMYVHESSQ FT GRTILKFQMRVNYRERKQLGFHKIFLQFRISTTRLTGAIHSWTGILERLKWRICNELAS FT LGFLSLVNLVFVIRYLPRVCSWIDEVDTIDCTDDVKVLLY" FT CDS complement(1224..1670) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J9PEE5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9PEE5" FT /protein_id="ADZ96630.1" FT /translation="MSNLPSGIKRKCPIQEPLHAAAKKAKRKVPESRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIPPETDVRPRELTGENHP FT QIPNEGQLPGEETTWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1579..2673) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J3QY03" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J3QY03" FT /protein_id="ADZ96631.1" FT /translation="MAPPKRFKIQAKNYFITYPHCSLSKEDCLAQLLNIQTPTNKKYIH FT IAKELHENGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WNQEEVPNSGATARSSEEGQEESS" FT CDS complement(2259..2516) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J9PEP7" FT /protein_id="ADZ96632.1" FT /translation="MGNLTSMCWCSSKVNSSAQIADSSTSCHPQGRITFTPTSRELNPR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLMTQPQRL" XX SQ Sequence 2827 BP; 745 A; 579 C; 682 G; 821 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccatcaa atgacaacac gtctttccgt 60 actctcttta atgatgacat tgctttataa ggaccaatgc tgttccagtc ttggtcgcca 120 agtatggctg aattgtggga ccctttgcag aacccactac cagatacttt atacggtttt 180 aggtgtatgc tatccgtaaa atacttgcaa agtattttga aaaaatacga gccaggaacc 240 ctagggttcg agctctgttc ggagttaatc cgtatcttca gggtcaggca gtatgacagg 300 gcgaatgcgc gttacgcaga gatttcatcc gtatgggggg agaccggtaa gacggaggct 360 gaacttcgag acagctatcg tgccctacac tgggaatgct gtcccaattg ctgcccgaag 420 ctatgtcccg gtttcaagag gcgtccggat gaagagaaag aggggtgacc gcatcccgaa 480 gggatgtgtt ggcccctgta aggtccagga ctatgagttc aagatggacg ttcctcacag 540 gggaacgttt gtctgtgtct cggattttac aagggggact gggcttaccc atcgccttgg 600 taagcgtgtt tgtgttaagt caatgggtat cgatgggaag gtctggatgg atgacaatgt 660 tgcgaagaga gatcacacca atatcatcac gtattggttg attcgtgaca ggaggcccaa 720 taaggatcca ctgaactttg atcaagtatt caccatgtat gacaatgagc cgactactgc 780 taagattcga atggatctga gagatagaat gcaggtgttg aagaagttct cagttacagt 840 ttcaggaggt ccatacaatc ataaggagca ggcattagtt aggaagtttt ttaagggttt 900 gtataatcat gttacttata atcacaaaga agaagctaaa tatgagaatc agttagaaaa 960 tgctcttatg ctgtatagtg ctagcagtca tgctagtaat cctgtgtatc agaccctgcg 1020 ttgcagggct tatttttatg attcacacaa taattaataa acttttattt tattaataca 1080 gtaatacctt tacatcatca gtacagtcga ttgtatctac ttcatctatc caagaacata 1140 ctcttggaag atatctaata acaaaaacta aattaactag actaagaaac cctaaactag 1200 ctaattcatt acaaattcgc catttaaggc gttccaaaat accagtccag ctgtgaatag 1260 caccagttag ccgggttgtc gatatcctga attgcaggaa gatcttgtgg aaaccaagtt 1320 gtttcctctc ccggtagttg accctcattt ggaatttgag gatggttctc ccctgtgagc 1380 tctcgtggac gtacatcagt ctcaggtgga atggtgcagt ccgacccgca gacatggggt 1440 tggtgtcgaa ttctagtgct ctcatagtct gagcatgatt tagtgattcc cctgtgcgtg 1500 aatccatgct ggaatttgca ggtttgggtt atgaaggctg aacagccgca acccttccac 1560 actatcctcg tccttgattc aggaactttc ctcttggcct tcttcgctgc tgcgtgcagt 1620 ggctcctgaa ttgggcactt cctcttgatt ccagaaggga gattggacat cgcagaatat 1680 agcgtttgct gttgcccaat tcttgagtgc tccttgctct ggtttgtcta gccagagttt 1740 aaatgaggaa ccctctcctg gattgcagag gaagatagtg ggaattccgc ctttaatttg 1800 aactggcttt ccgtatttac agtttgattg ccagtccttc tgggccccca taaattcttt 1860 aaagtgcttt aggtattggg ggttgacgtc atcaatgacg ttataccaag cactgttgct 1920 gtaaactttt ggactaagat ctaaatgccc acacaaataa ttgtgagggc ccaaagacct 1980 ggcccatact gttttgccta ttctgcttgg gccttcaata acaatggata tgggtctatc 2040 cggccgcgca gcggaatcca tgacattttc agcggcccag tcgctgataa tgtcaggaac 2100 ggcattgaaa gaagatgaag aaaaaggtga agaatataca gaaggtgggg gagaaaaaat 2160 cctatctaaa ttagaaacta aattatgata ttgaaataaa tatttttcag ggagcttctc 2220 cctgattatt tgcaacgcag cttctttaga acctgcgttt agagcctctg cggctgcgtc 2280 attagcagtc tgctgacctc ctctagcaga tctgccgtcg atctggaatt caccccaggt 2340 gagggtatcc ccgtccttat caacgtagga cttgacatcg gacgaggatt tagctccctg 2400 gatgttgggg tgaaagtgat tcgaccttgt gggtgacacg aggtcgaaga atctgctatt 2460 tgtgcagacg aatttacctt cgaactgcac cagcacatgg aggtgaggtt ccccattctc 2520 gtgcagttct ttggctatgt gtatgtattt tttgttcgtt ggggtttgga tatttagcag 2580 ttgggctagg cagtcctctt tagagagaga acagtgtgga tatgtaatga aataattttt 2640 ggcttggatt ttaaaacgtt tgggaggagc catttggaga caatcactag ttcaaatgaa 2700 ttggagactg gagacaatat atagtatgtc tccaaatggc attttggtaa tttagaagat 2760 ccttttagct ttaattcaaa ttccgacaac tctgggtcca cctaaaggcg ggcaccgtat 2820 taatatt 2827 //