ID HQ393467; SV 1; circular; genomic DNA; STD; VRL; 2828 BP. XX AC HQ393467; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-PE[BR:MP5:09], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2828 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2828 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2828 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; abf99671afd1b7262195c0d5aa5d3a9d. XX FH Key Location/Qualifiers FH FT source 1..2828 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="Pernambuco" FT /isolate="SPLCV-PE[BR:MP5:09]" FT /mol_type="genomic DNA" FT /country="Brazil:Rio Grande do Sul" FT /lat_lon="30.21 S 51.28 W" FT /collected_by="Leonardo Cunha de Albuquerque" FT /collection_date="2009" FT /clone="RS29Bam5" FT /db_xref="taxon:100755" FT CDS 98..469 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J7EL42" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:J7EL42" FT /protein_id="ADZ96621.1" FT /translation="MLFQSWSPSMADLWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 294..1058 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J7EPK6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J7EPK6" FT /protein_id="ADZ96622.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHRGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFDQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1074..1508) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEX9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEX9" FT /protein_id="ADZ96623.1" FT /translation="MDSRTGESLSHAQTMRALEFDTNPMSAGRTAPFNLRLMYVHESAQ FT GRTILKFQMRVNYRERKQLGFHKIFLQFRISTTRLTGAIHSWTGILERLKWRICNELAS FT LGFLSLINLVFVIRYLPRVCSWIDEVDTIDCTDDVKILLY" FT CDS complement(1225..1671) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J9PEJ6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9PEJ6" FT /protein_id="ADZ96624.1" FT /translation="MSNLPSGIKRKCPIQEPLHATAKKAKRKVPETRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIQPEADVRPRERTGENHP FT QIPNEGQLPGEETTWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1580..2674) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J9PEE4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9PEE4" FT /protein_id="ADZ96625.1" FT /translation="MAPPKRFRISSKNYFITYPRCSLSKEDCLAQLLHIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVSPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WDQEEVSHSGATARNSEEGQEESS" FT CDS complement(2260..2517) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J7EPY4" FT /protein_id="ADZ96626.1" FT /translation="MGNLTSMCWCSSKVNSSAQIADSSTLSHQQGRITFTPTSRELNPR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2828 BP; 738 A; 578 C; 689 G; 823 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccacaaa tgggcaacgc gttttcccgt 60 acttactttt aatgatgaca ttgctttata aggaccaatg ctgttccagt cttggtcgcc 120 aagtatggct gatttgtggg accctttgca gaacccacta ccagatactt tatacggttt 180 taggtgtatg ctatccgtaa aatacttgca aagtattttg aaaaaatacg agccaggaac 240 cctagggttc gagctctgtt cggagttaat ccgtatcttc agggtcaggc agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc cgtatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgac cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caagatggac gttcctcaca 540 ggggaacgtt tgtctgtgtc tcggatttta caaggggaac tgggcttact catcgcctgg 600 gtaagcgtgt ttgtgttaag tctatgggta tcgatgggaa ggtctggatg gatgacaatg 660 ttgcgaagag agatcacacc aatatcatta cgtattggtt gattcgtgac aggaggccca 720 ataaggatcc gctgaacttt gatcaagtat tcaccatgta tgacaatgag ccgactactg 780 ctaagatccg aatggatctg agagatagaa tgcaggtgtt gaagaagttc tcagttacag 840 tttcgggagg tccatacaat cataaggagc aggcattagt taggaagttt tttaagggtt 900 tgtataatca tgtgacttat aatcacaagg aagaagctaa atatgagaat cagttagaaa 960 atgctcttat gctgtatagt gctagcagtc atgctagcaa tcctgtgtat cagaccctgc 1020 gttgcagggc ttatttttat gattcacaca ataattaata aaattttatt ttattaatat 1080 agtaatatct ttacatcatc agtacagtcg attgtatcta cttcatctat ccaagaacat 1140 actcttggaa gatatctaat aacaaaaact aaattaatta gactaagaaa ccctaaacta 1200 gctaattcat tacatattcg ccatttaagg cgttccaaaa taccagtcca gctgtgaata 1260 gcaccagtta gccgggttgt cgatatcctg aattgcagga agatcttgtg gaaaccaagt 1320 tgtttcctct cccggtagtt gaccctcatt tggaatttga ggatggttct cccctgtgcg 1380 ctctcgtgga cgtacatcag cctcaggttg aatggtgcag tccgacccgc agacatgggg 1440 ttggtgtcga attctagtgc tctcatagtc tgagcatgac ttagtgattc ccctgtgcgt 1500 gaatccatgc tggaatttgc aggtttgggt tatgaaggct gagcatccgc aacccttcca 1560 cactatcctc gtccttgttt caggaacttt cctcttggcc ttcttcgctg ttgcgtgcag 1620 tggctcctga atgggacact tcctcttgat cccagaaggg agattggaca tcgcagaata 1680 tagcgtttgc tgttgcccaa ttcttgagtg ctccttgctc tggtttgtct agccagagtt 1740 taaatgagga accctctcct ggattgcaga ggaagatagt gggaattccg cctttaattt 1800 gaactggctt tccgtattta cagttggatt gccagtcctt ctgggccccc atgaattctt 1860 taaagtgctt taggtattgg gggctgacgt catcaatgac gttataccaa gcactattgc 1920 tgtaaacttt tggactaaga tctaaatgcc cacacaaata attgtgaggg cccaaagacc 1980 tggcccatac tgttttgcct attctgcttg ggccttcaat aacaatggat atgggtctat 2040 ccggccgcgc agcggaatcc atgacatttt cagcggccca gtcgctgata atgtcaggaa 2100 cggcattgaa agaagatgaa gaaaaaggtg aagaatatac agaaggtgga ggagaaaaaa 2160 tcctatctaa attagaaact aaattatgat attgaaataa atatttttca gggagcttct 2220 ccctgattat ttgcaacgca gcttctttag aacctgcgtt tagagcctct gcggctgcgt 2280 cgttagcagt ctgctgacct cctctagcag atctgccgtc gatctggaat tcaccccagg 2340 tgagggtatc cccgtcctta tcaacgtagg acttgacatc ggacgaggat ttagctccct 2400 ggatgttggg gtgaaagtga ttcgaccttg ttggtgagac aaggtcgaag aatctgctat 2460 ttgtgcagac gaatttacct tcgaactgca ccagcacatg gaggtgaggt tccccatcct 2520 cgtgcagttc tttggctatg tgtatgtatt ttttgttggt tggggtttgg atgtgtagta 2580 gttgggctag gcagtcctct ttagagagag aacagcgtgg ataagtaatg aaatagtttt 2640 ttgaagaaat tctaaaacgt ttgggcggag ccatttggtg acactgatac tttcaaatga 2700 attggtgact ggtgacaatt tatactatgt caccaaatgg cattttggta atttagaaga 2760 tccttttagc tttaattcaa attccgacaa ctctgggtcc accaaaaggc gggcaccgta 2820 ttaatatt 2828 //