ID HQ393466; SV 1; circular; genomic DNA; STD; VRL; 2828 BP. XX AC HQ393466; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-PE[BR:MP4:09], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2828 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2828 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2828 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 7ee430ebd1e2513ed9df3bc0a80e8690. XX FH Key Location/Qualifiers FH FT source 1..2828 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="Pernambuco" FT /isolate="SPLCV-PE[BR:MP4:09]" FT /mol_type="genomic DNA" FT /country="Brazil:Rio Grande do Sul" FT /lat_lon="31.21 S 51.35 W" FT /collected_by="Leonardo Cunha de Albuquerque" FT /collection_date="2009" FT /clone="RS24Sac7" FT /db_xref="taxon:100755" FT CDS 98..469 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J9PEE2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:J9PEE2" FT /protein_id="ADZ96615.1" FT /translation="MLFQSWSPSMAELWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKKRPDEEKEG" FT CDS 294..1058 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J9PE93" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9PE93" FT /protein_id="ADZ96616.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRSVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHRGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFDQLFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1074..1508) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEC8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEC8" FT /protein_id="ADZ96617.1" FT /translation="MDSRTGESLNRAQTMRALEFDTNPMSAGRTAPFHLRLMYVHESAQ FT GRTILKFQMRVNYRERKQLGFHKIFLQFRISTTRLTGAIHSWTGILERLKWRICNELAS FT LGFLSLVNLVFVIRYLPRVCSWIDEVDTIDCTDDVKVLLY" FT CDS complement(1225..1671) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J9PEX8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9PEX8" FT /protein_id="ADZ96618.1" FT /translation="MSDLPSGIKRKSPIQEPLHAAAKKAKRKVPESRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIPPETDVRPRERTGENHP FT QIPNEGQLPGEETTWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1580..2674) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J9PEJ5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9PEJ5" FT /protein_id="ADZ96619.1" FT /translation="MAPPKRFKIQAKNYFITYPHCSLSKEECLAQLLHIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWAVANAIFCDVRSPF FT WNQEEVSNSGAIARSSEEGQEESS" FT CDS complement(2260..2517) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J9PEE3" FT /protein_id="ADZ96620.1" FT /translation="MGNLTSMCWCSSKVNSSAQIADSSTLCHPQGRITFTPTSRELNPR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2828 BP; 748 A; 583 C; 680 G; 817 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccaccaa ttggcaacgc gtcttttccg 60 tactatcttt aatgatgaca ttgctttata aggaccaatg ctgttccagt cttggtcgcc 120 aagtatggct gaattgtggg accctttgca gaacccacta ccagatactt tatacggttt 180 taggtgtatg ctatccgtaa aatacttgca aagtattttg aaaaaatacg aaccaggaac 240 cctagggttc gagctctgtt cggagttaat ccgtatcttc agggtcaggc agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc cgtatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gttatgtccc ggtttcaaga agcgtccgga tgaagagaaa gaggggtgac cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caaaatggac gttcctcaca 540 ggggaacgtt tgtctgtgtc tcggatttta caagggggac tgggcttacc catcgccttg 600 gtaagcgtgt ttgtgttaag tcaatgggta tcgatgggaa ggtctggatg gatgacaatg 660 ttgcgaagag agatcacacc aatatcatca cgtattggtt gattcgtgac aggaggccca 720 ataaggatcc actgaacttt gatcaattat tcaccatgta tgacaatgag ccgactactg 780 ctaagattcg aatggatctg agagatagaa tgcaggtgtt gaagaagttc tcagttacag 840 tttcaggagg tccatacaat cataaggagc aggcattagt taggaagttt tttaagggtt 900 tgtacaatca tgtgacttat aatcacaaag aagaagctaa atatgagaat cagttagaaa 960 atgctcttat gctgtatagt gctagcagtc atgctagtaa tcctgtgtat cagaccctgc 1020 gttgcagggc ttatttttat gattcacata ataattaata aacttttatt ttattaatac 1080 agtaatacct ttacatcatc agtgcagtcg attgtatcta cttcatctat ccaagaacat 1140 actcttggaa gatatctaat aacaaaaact aaattaacta gactaagaaa ccctaaacta 1200 gctaattcat tacagattcg ccatttaagg cgttccaaaa taccagtcca gctgtgaata 1260 gcaccagtta gccgggttgt cgatatcctg aattgcagga agatcttgtg gaaaccaagt 1320 tgtttcctct cccggtagtt gaccctcatt tggaatttga ggatggttct cccctgtgcg 1380 ctctcgtgga cgtacatcag tctcaggtgg aatggtgcag tccgacccgc agacatgggg 1440 ttggtgtcga attctagtgc tctcatagtc tgagcacgat ttagtgattc ccctgtgcgt 1500 gaatccatgc tggaatttgc aggtttgggt tatgaaggct gaacagccgc aacccttcca 1560 cactatcctc gtccttgatt caggaacttt cctcttggcc ttcttcgctg ctgcgtgcaa 1620 tggctcctga attggagact tcctcttgat tccagaaggg agatcggaca tcgcagaata 1680 tagcgtttgc tactgcccaa ttcttgagtg ctccttgctc tggtttgtct agccagagtt 1740 taaatgagga accctctcct ggattgcaga ggaagatagt gggaattccg cctttaattt 1800 gaactggctt tccgtattta cagtttgatt gccagtcctt ctgggccccc atgaattctt 1860 taaagtgctt taggtattgg gggttgacgt catcaattac gttataccaa gcactgttgc 1920 tgtaaacttt tggactaaga tctaaatgcc cacacaaata attgtgaggg cccaaagacc 1980 tggcccatac tgttttgcct attctgcttg ggccttcaat aacaatggat atgggtctat 2040 ccggccgcgc agcggaatcc atcacatttt cagcggccca gtcgctgata atgtcaggaa 2100 cggcattgaa agaagatgaa gaaaaaggtg aagaatatac agaaggtggg ggagaaaaaa 2160 tcctatctaa atttgaaact aaattatgat attgaaataa atatttttca gggagcttct 2220 ccctgattat ttgcaacgca gcttctttag aacctgcgtt tagagcctct gcggctgcgt 2280 cgttagcagt ctgctgacct cctctagcag atctgccgtc gacctggaat tcaccccagg 2340 tgagggtatc cccgtcctta tcaacgtagg acttgacatc ggacgaggat ttagctccct 2400 ggatgttggg gtgaaagtga ttcgaccttg tgggtgacac aaggtcgaag aatctgctat 2460 ttgtgcagac gaatttacct tcgaactgca ccagcacatg gaggtgaggt tccccatcct 2520 cgtgcagttc tttggctatg tgtatgtatt ttttattggt tggggtttgg atatgtagca 2580 gttgggctag gcactcctct ttagaaaggg aacagtgtgg ataggtaatg aaataatttt 2640 tggcttggat tttaaaacgt ttgggaggag ccatttggag acaatcacta gttcaaatga 2700 attggagact ggagacaata tataatatgt ctccaaatgg cattttggta atttagaaga 2760 tccttttagc tttaattcaa aatccgacaa atctgggccc acctaaaggc gggcaccgta 2820 ttaatatt 2828 //