ID HQ393461; SV 1; circular; genomic DNA; STD; VRL; 2829 BP. XX AC HQ393461; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-PE[BR:PF:09], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2829 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2829 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2829 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 01a245792a1bedb3ff5e72f613e11add. XX FH Key Location/Qualifiers FH FT source 1..2829 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="Pernambuco" FT /isolate="SPLCV-PE[BR:PF:09]" FT /mol_type="genomic DNA" FT /country="Brazil:Paraiba" FT /lat_lon="7.24 S 35.06 W" FT /collected_by="Simone G. Ribeiro" FT /collection_date="2009" FT /clone="PB82Sac32" FT /db_xref="taxon:100755" FT CDS 99..470 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:H9CJY1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:H9CJY1" FT /protein_id="ADZ96585.1" FT /translation="MLFQSWSPSMAELWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 295..1059 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J9PEP3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9PEP3" FT /protein_id="ADZ96586.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHRGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFDQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEANYENQLE FT NALMLYSASSHASNPVYQTLRCRVYFYDSHNN" FT CDS complement(1075..1509) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEX3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEX3" FT /protein_id="ADZ96587.1" FT /translation="MDSRTGESLNRAQTMRALEFDTNPMSAGRTAPFHLRLMYVHESAQ FT GRTILKFQMRVNYRERKQLGFHKIFLQFRISTTRLTGAIHSWTGILERLKWRICNELAN FT LGFLSLVNLVFVIRYLPRVCSWIDEVDTIDCTDDVKVLLY" FT CDS complement(1226..1672) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J9PEJ1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9PEJ1" FT /protein_id="ADZ96588.1" FT /translation="MSNLPSGIKRKCPIQEPLHAAAKKDKRKVPETRTRIVWKGCGCSA FT FITTTCKFQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIPPETDVRPRERTGENHP FT QIPNEGQLPGEETTWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1581..2675) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J9PEE0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9PEE0" FT /protein_id="ADZ96589.1" FT /translation="MAPPKRFKIQAKNYFITYPHCSLSKEDCLAQLLNIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIICDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WNQEEVSHSGATARSSEEGQEESS" FT CDS complement(2261..2518) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J9PE92" FT /protein_id="ADZ96590.1" FT /translation="MGNLTSMCWCSSKVNSSAQIADSSTLCHQQGRITFTPTSRELNPR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLTTQPQRR" XX SQ Sequence 2829 BP; 741 A; 581 C; 683 G; 824 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccaccta attgacaacg cgtcttttcc 60 gtactctctt taatgatgac attgctttat aaggaccaat gctgttccag tcttggtcgc 120 caagtatggc tgaattgtgg gaccctttgc agaacccact accagatact ttatacggtt 180 ttagatgtat gctatccgta aaatacttgc aaagtatttt gaaaaaatac gagccaggaa 240 ccctagggtt cgagctctgt tcggagttaa tccgtatctt cagggtcagg cagtatgaca 300 gggcgaatgc gcgttacgca gagatttcat ccgtatgggg ggagaccggt aagacggagg 360 ctgaacttcg agacagctat cgtgccctac actgggaatg ctgtcccaat tgctgcccga 420 agctatgtcc cggtttcaag aggcgtccgg atgaagagaa agaggggtga ccgcatcccg 480 aagggatgtg ttggtccctg taaggtccag gactatgagt tcaagatgga cgttcctcac 540 aggggaacgt ttgtctgtgt ctcggatttt acaaggggga ctgggcttac ccatcgcctt 600 ggtaagcgtg tttgtgttaa gtcaatgggt atcgatggga aggtctggat ggatgacaat 660 gttgcgaaga gagatcacac caatatcatc acgtattggt tgattcgtga caggaggccc 720 aataaggatc cgctgaactt tgatcaagta ttcaccatgt atgacaatga gcctactact 780 gctaagattc gaatggatct gagagataga atgcaggtgt tgaagaagtt ctcagttaca 840 gtttcaggag gtccatacaa tcataaggag caggcattag ttaggaagtt ttttaagggt 900 ttgtataatc atgtgactta taatcacaaa gaagaagcta actatgagaa tcagttagaa 960 aatgctctta tgctgtatag tgctagcagt catgctagta atcctgtgta tcagaccctg 1020 cgttgcaggg tttattttta tgattcacac aataattaat aaacttgtat tttattaata 1080 cagtaatacc tttacatcat cagtacagtc gattgtatct acttcatcta tccaagaaca 1140 tactcttgga agatatctaa taacaaaaac taaattaact agactaagaa accctaaatt 1200 agctaattca ttacagattc gccatttaag gcgttccaaa ataccagtcc agctgtgaat 1260 agcaccagtt agccgggttg tcgatatcct gaattgcagg aagatcttgt ggaaaccaag 1320 ttgtttcctc tcccggtagt tgaccctcat ttggaatttg aggatggttc tcccctgtgc 1380 gctctcgtgg acgtacatca gtctcaggtg gaatggtgca gtccgacccg cagacatggg 1440 gttggtgtcg aattctagtg ctctcatagt ctgagcacga tttagtgatt cccctgtgcg 1500 tgaatccatg ctggaatttg caggttgtgg ttatgaaggc tgaacagcca caacccttcc 1560 acactatcct cgtccttgtt tcaggaactt tcctcttgtc cttcttcgct gctgcgtgca 1620 gtggctcctg aatgggacac ttcctcttga ttccagaagg gagattggac atcgcagaat 1680 atagcgtttg ctgttgccca attcttgagt gctccttgct ctggtttgtc tagccagagt 1740 ttaaatgagg atccctctcc tggattgcag aggaagatag tgggaattcc gcctttaatt 1800 tgaactggct ttccgtattt acagttggat tgccagtcct tctgggcccc catgaattct 1860 ttaaagtgct ttaggtattg ggggttgacg tcatcaatga cgttatacca agcactgttg 1920 ctatatactt ttgggctaag atctaaatgc ccacacaaat aattgtgagg gcccaaagac 1980 ctggcccata ctgttttgcc tattctgctt gggccttcaa taacaatgga tatgggtcta 2040 tccggccgcg cagcggaatc catgacattt tcagcggccc agtcgcagat aatgtcagga 2100 acggcattga aagaagatga agaaaaaggt gaagaatata cagaaggtgg aggagaaaaa 2160 atcctatcta aattagaaac taaattatga tattgaaata aatatttttc agggagcttc 2220 tccctgatta tttgcaacgc agcttcttta gaacctgcgt ttagcgcctc tgcggctgcg 2280 tcgttagcag tctgctgacc tcctctagca gatctgccgt cgacctggaa ttcaccccag 2340 gtgagggtat ccccgtcctt atcaacgtag gacttgacat cggacgagga tttagctccc 2400 tggatgttgg ggtgaaagtg attcgacctt gttggtgaca caaggtcgaa gaatctgcta 2460 tttgtgcaga cgaatttacc ttcgaactgc accagcacat ggaggtgagg ttccccatcc 2520 tcgtgcagtt ctttggctat gtgtatgtat tttttgttgg ttggggtttg gatatttagc 2580 agttgggcta gacagtcctc tttagagaga gaacagtgtg gatacgtaat gaagtaattt 2640 ttggcttgga ttttaaaacg tttgggagga gccatttgga gacaatcata atttcaaatg 2700 aattggagac tggagacaat atatagtatg tctccaaatg gcattttggt aatttagaag 2760 atccttttag ctttaattca aaatccgaca actttgggtc cacctaaagg cgggcaccgt 2820 attaatatt 2829 //