ID HQ393457; SV 1; circular; genomic DNA; STD; VRL; 2843 BP. XX AC HQ393457; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato golden vein associated virus isolate SPGVaV-RO[BR:PV2:08], DE complete genome. XX KW . XX OS Sweet potato golden vein associated virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2843 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2843 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2843 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 6b7a205a5d992731311b59106cbae2eb. XX FH Key Location/Qualifiers FH FT source 1..2843 FT /organism="Sweet potato golden vein associated virus" FT /host="Ipomoea batatas" FT /strain="Rondonia" FT /isolate="SPGVaV-RO[BR:PV2:08]" FT /mol_type="genomic DNA" FT /country="Brazil:Rondonia" FT /lat_lon="9.55 S 63.25 W" FT /collected_by="Joao Bosco Silva" FT /collection_date="2008" FT /clone="346Eco4" FT /db_xref="taxon:688540" FT CDS 98..469 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J9PEN8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:J9PEN8" FT /protein_id="ADZ96561.1" FT /translation="MLFQSWSPSMADLWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 294..1058 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J9PEW6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9PEW6" FT /protein_id="ADZ96562.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHRGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPMNFDQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEANYENQLE FT NALMLYSASSHASNPVYQTLRCRVYFYDSHNN" FT CDS complement(1074..1508) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEI7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEI7" FT /protein_id="ADZ96563.1" FT /translation="MDSRTGESLNRAQTMRALEFDTNPMSAGQTAPFHLRLMYVHESAQ FT GRTILKFQMRVNYRERKQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNELAS FT LGFLSLVNLVFVIRYLPRVCSWIDEVDTIDCTDDVNVLLY" FT CDS complement(1225..1671) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J9PED6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9PED6" FT /protein_id="ADZ96564.1" FT /translation="MSNLPSGIKRKCPIQEPLHAAAKKAKRKVPESRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIPPETDVRPRERTGENHP FT QIPNEGQLPGEETTWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1580..2674) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J9PE88" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9PE88" FT /protein_id="ADZ96565.1" FT /translation="MPRAGRFNLNAKNYFLTYPQCSISKEEALAQIQNIPTAVNKKFIK FT ICRELHEDGQPHLHVLLQFEGKFQCTNQRLFDLVSQTRSAHFHPNIQRAKSSSDVKSYV FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGSKDAALQIIREKLPEKFIFQYH FT NLVSNLDRIFSPPPSVYSSPFSISSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WNQEEVSNSGATARSSEEGQEESS" FT CDS complement(2260..2517) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J7EL35" FT /protein_id="ADZ96566.1" FT /translation="MGNLISMCFCNSKANSSARTNAYSTWSLKPGQHISILTFKELNPA FT PTSSPTSIRMETHWNGANSRSTADLLEEASRLLTTQQQKH" XX SQ Sequence 2843 BP; 745 A; 579 C; 672 G; 847 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccaccaa ttgacaacgc gtcttttccg 60 tactctcttt aatgatgaca ttgctttata aggaccaatg ctgttccagt cttggtcgcc 120 aagtatggct gatttgtggg accctttgca gaacccacta ccagatactt tatacggttt 180 taggtgtatg ctatccgtaa aatacttgca aagtattttg aaaaaatacg agccaggaac 240 cctagggttc gaactctgtt cggagttaat ccgtatcttc agggtcagac agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc cgtatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgac cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caagatggac gttcctcaca 540 ggggaacgtt tgtctgtgtc tcggatttta caagggggac tgggcttacc catcgccttg 600 gtaagcgtgt ttgtgttaag tcaatgggta tcgatgggaa ggtctggatg gatgacaatg 660 ttgcgaagag agatcacacc aatatcatca cgtattggtt gattcgtgac aggaggccca 720 ataaggatcc aatgaacttt gatcaagtat tcaccatgta tgacaatgag ccgactactg 780 ctaagattcg aatggatctg agagatagaa tgcaggtgtt gaagaagttc tcagttacag 840 tttcaggagg tccatacaat cataaggagc aggcattagt taggaagttt tttaagggtt 900 tgtataatca tgtgacttat aatcacaaag aagaagctaa ctatgagaat cagttagaaa 960 atgctcttat gctgtatagt gctagcagtc atgctagtaa tcctgtgtat cagaccctgc 1020 gttgcagggt ttatttttat gattcacaca ataattaata aacttttatt ttattaatac 1080 agtaatacat ttacatcatc agtacagtcg attgtatcta cttcatctat ccaagaacat 1140 actcttggaa gatatctaat aacaaaaact aaattaacta gactaagaaa ccctaaacta 1200 gctaattcat tacagattcg ccatttaagg cgttccaaaa taccagtcca gctgtgaata 1260 gcaccagtta gccgggttgt caatatcctg aattgcagga agatcttgtg gaaaccaagt 1320 tgtttcctct cccggtagtt gaccctcatt tggaatttga ggatggttct cccctgtgcg 1380 ctctcgtgga cgtacatcag tctcaggtgg aatggtgcag tctgacccgc agacatgggg 1440 ttggtgtcga attctagtgc tctcatagtc tgagcacgat ttagtgattc ccctgtgcgt 1500 gaatccatgt tggaatttgc aggtttgggt tatgaaggct gaacagccgc aacccttcca 1560 cactatcctc gtccttgatt caggaacttt cctcttggcc ttcttcgctg ctgcgtgcag 1620 tggctcctga attggacact tcctcttgat tccagaaggg agattggaca tcgcagaaaa 1680 ttgcgtttgc tgttgcccaa ttcttgagtg ctccttgctc tggtttgtct agccagagtt 1740 taaatgagga accctctcct ggattgcaga ggaagatagt gggaattccg cctttaattt 1800 gaactggctt tccgtattta cagttgcttt gccagtcctt ctgggccccc atgaattctt 1860 taaagtgctt taggtattgg gggttgacgt catcaatgac gttataccaa gcactgttgc 1920 tatacacctt tggactcagg tccaaatgcc cacacagata attatgtggg cctaaggatc 1980 tagcccaaac tgttttacct attctacttg ggccttctat aactatactt atgggcctat 2040 ccggccgcgc agcggaatcc atgacatttt cagcggccca gtcgctgatt atgtcaggaa 2100 cggcattgaa agaagaaatg gaaaaaggtg aagaataaac agaaggagga ggagaaaaaa 2160 tcctatctaa attagaaact aaattatgat attgaaatat aaatttttca gggagtttct 2220 ccctgattat ttgtaaagca gcgtctttac ttcctgcatt taatgcttct gctgctgcgt 2280 cgttagcagt ctgctggcct cctctagcag atctgccgtc gacctggaat tcgccccatt 2340 ccaatgtgtc tccatcctta tcgacgtagg acttgacgtc ggagctggat ttagctcttt 2400 gaatgttagg atggaaatgt gctgacctgg tttgagagac caggtcgaat aggcgttggt 2460 tcgtgcactg gaatttgcct tcgaattgca gaagcacatg gagatgaggt tgcccatctt 2520 cgtgtagttc cctgcagatt ttaatgaatt ttttatttac tgcagttggg atattttgga 2580 tttgggctaa tgcttcttct ttggagatag agcattgggg atatgtaaga aaataatttt 2640 tggcatttag attgaacctc ccggctctcg gcattttaaa aagcaatggg tggacacaca 2700 aactctatat gaattggtgg aagggtggac aatttatatg tgtccaccta atggcatttt 2760 ggtaatttag aagatccttt tagctttaat ttgaattcag aaatcttatt ggtccgccat 2820 aaagcgggca ccgtattaat att 2843 //