ID HQ393456; SV 1; circular; genomic DNA; STD; VRL; 2829 BP. XX AC HQ393456; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-PE[BR:PV:08], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2829 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2829 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2829 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 45378250b083449a2a7bea59c482a121. XX FH Key Location/Qualifiers FH FT source 1..2829 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="Pernambuco" FT /isolate="SPLCV-PE[BR:PV:08]" FT /mol_type="genomic DNA" FT /country="Brazil:Rondonia" FT /lat_lon="9.55 S 63.25 W" FT /collected_by="Joao Bosco Silva" FT /collection_date="2008" FT /clone="346Eco2" FT /db_xref="taxon:100755" FT CDS 98..469 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J9PE87" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:J9PE87" FT /protein_id="ADZ96555.1" FT /translation="MLFQSWSPSMADMWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 294..1058 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J9PEN7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9PEN7" FT /protein_id="ADZ96556.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHRRTFVCYSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFDQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEANYENQLE FT NALMLYSASSHASNPVYQTLRCRVYFYDSHNN" FT CDS complement(1074..1508) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEW5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEW5" FT /protein_id="ADZ96557.1" FT /translation="MDSRTGESLSHAQTMRALEFDNNPMSAGRTAPFNLRIMYVHESTQ FT GRTILKFQMRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNGLAN FT IGFLSLVNLVFVIRYLPRVCSWIDEVDTIDCTDDVKVLLY" FT CDS complement(1225..1671) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J9PEI5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9PEI5" FT /protein_id="ADZ96558.1" FT /translation="MSNLPSGLKRKCPIQEPLHAEAKKVKRKVPETRTRIVWKGCGCSA FT FITTTCKYQHGFTHRGITKSCSDYESTRIRQQPHVCGSDCPIQSPNNVCPREHTGENHP FT QIPNEGQLQGKEATGIPQDLPPIQDLDDPTNWCYSQLDWYFGTP" FT CDS complement(1580..2674) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J9PED5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9PED5" FT /protein_id="ADZ96559.1" FT /translation="MAPPKRFRISSKNYFITYPRCSLSKEDCLAQLLHIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAKKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WTQEEVSHSGATARRGEEGQEESS" FT CDS complement(2260..2517) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F2X5F5" FT /protein_id="ADZ96560.1" FT /translation="MGNLTSMCWCSSKVNSSAQIADSSTLSHPQGRITFTPTSRELNPR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2829 BP; 745 A; 581 C; 678 G; 825 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccaccaa ttgacaacgc gtcttttccg 60 tactctcttt aatgatgaca ttgctttata aggaccaatg ctgttccagt cttggtcgcc 120 aagtatggct gatatgtggg accctttgca gaacccacta ccagatactt tatacggttt 180 taggtgtatg ctatccgtaa aatacttgca aagtattttg aaaaaatacg agccaggaac 240 cctagggttc gaactctgtt cggagttaat ccgtatcttc agggtcagac agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc cgtatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgac cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caagatggac gttcctcaca 540 ggcgaacgtt tgtctgttac tcggatttta caagggggac tgggcttacc catcgccttg 600 gtaagcgtgt ttgtgttaag tcaatgggta tcgatgggaa ggtctggatg gatgacaatg 660 ttgcgaagag agatcacacc aatatcatca cgtattggtt gattcgtgac aggaggccca 720 ataaggatcc actgaacttt gatcaagtat tcaccatgta tgacaatgag ccgactactg 780 ctaagattcg aatggatctg agagatagaa tgcaggtgtt gaagaagttc tcagttacag 840 tttcaggagg tccatacaat cataaggagc aggcattagt taggaagttt tttaagggtt 900 tgtataatca tgtgacttat aatcacaaag aagaagctaa ctatgagaat cagttagaaa 960 atgctcttat gctgtatagt gctagcagtc atgctagtaa tcctgtgtat cagaccctgc 1020 gttgcagggt ttatttttat gattcacaca ataattaata aacttttatt ttattaatac 1080 agtaatacct ttacatcatc agtacagtcg attgtatcta cttcatctat ccaagaacat 1140 actcttggaa gatatctaat aacaaaaact aaattaacta gactaagaaa ccctatattt 1200 gctaatccat tacagattcg ccatttaagg cgttccaaaa taccagtcca actgtgaata 1260 gcaccagtta gtcgggtcgt caagatcctg aattggagga agatcttgtg gaatcccagt 1320 tgcctccttt ccctgtagtt gaccctcatt tggaatttga ggatggttct cccctgtgtg 1380 ctctcgtgga catacattat tcggagattg aatggggcag tccgacccgc agacatgggg 1440 ttgttgtcga attcgagtgc tctcatagtc tgagcatgac ttagtgattc ccctgtgcgt 1500 gaatccatgc tggtacttgc aggttgtggt tatgaaggct gaacaaccac aacccttcca 1560 cactatcctc gtccttgttt caggaacttt cctcttgacc ttcttcgcct ctgcgtgcag 1620 tggctcctga atgggacact tcctcttgag tccagaaggg agattggaca tcgcagaata 1680 tagcgtttgc tgttgcccaa ttcttgagtg ctccttgttc tggtttgtct agccagagtt 1740 taaatgagga accctctcct ggattgcaga ggaagatagt gggaattccg cctttaattt 1800 gaactggctt tccgtattta cagttggatt gccagtcctt cttggccccc atgaattctt 1860 taaagtgctt taggtattgg gggttgacgt catcaattac gttataccaa gcactgttgc 1920 tgtaaacttt tgggctaaga tctaaatgcc cacacaaata attgtgaggg cccaaagacc 1980 tggcccatac tgttttgcct attctgcttg ggccttcaat aacaatggat atgggtctat 2040 ccggccgcgc agcggaatcc atgacatttt cagcggccca gtcgctgata atgtcaggaa 2100 cggcattgaa agaagatgaa gaaaaagggg aagaatatac agaaggtgga ggagaaaaaa 2160 tcctatctaa attagaaact aaattatgat attgaaataa atatttttca gggagtttct 2220 ccctaattat ttgtaacgca gcttctttag aacctgcgtt tagagcctct gcggctgcgt 2280 cgttagcagt ctgctgacct cctctagcag atctgccgtc gacctggaat tcaccccagg 2340 tgagggtatc cccgtcctta tcaacgtagg acttgacatc ggacgaggat ttagctccct 2400 ggatgttggg gtgaaagtga ttcgaccttg tgggtgagac aaggtcgaag aatctgctat 2460 ttgtgcagac gaatttacct tcgaactgca ccagcacatg gaggtgaggt tccccatcct 2520 cgtgcagttc tttggctatg tgtatgtatt ttttgttggt tggggtttgg atgtgtagta 2580 gttgggctag gcagtcctct ttagagagag aacagcgtgg ataagtaatg aaatagtttt 2640 ttgaagaaat tctaaaacgt ttgggcggag ccatttggtg acactcagac tttcaaaatg 2700 aattggtgac tggtgacaat ttatactatg tcaccaaatg gcattttggt aatttagaag 2760 atccttttag ctttaattca aattccgaca actctgggtc cacataaagg cgggcaccgt 2820 attaatatt 2829 //