ID HQ393455; SV 1; circular; genomic DNA; STD; VRL; 2828 BP. XX AC HQ393455; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-PR[BR:OPO:08], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2828 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2828 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2828 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 5c9d0bd36cfe704f1afbf7bc651470bd. DR EuropePMC; PMC3485178; 23082767. XX FH Key Location/Qualifiers FH FT source 1..2828 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="Puerto Rico" FT /isolate="SPLCV-PR[BR:OPO:08]" FT /mol_type="genomic DNA" FT /country="Brazil:Rondonia" FT /lat_lon="11.5 S 63.1 W" FT /collected_by="Joao Bosco Silva" FT /collection_date="2008" FT /clone="337Sac10" FT /db_xref="taxon:100755" FT CDS 98..469 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J9PED4" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:J9PED4" FT /protein_id="ADZ96549.1" FT /translation="MMFQSWSPSMDQLWDPLLNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELNRIFRVRQYDRANARYAEISSIWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 294..1058 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J9PE86" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9PE86" FT /protein_id="ADZ96550.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFSQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVTGGPYNHKEQALVRKFFRSLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1074..1508) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J7EPX8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J7EPX8" FT /protein_id="ADZ96551.1" FT /translation="MDSRTGESLSHAQTTRALEFDTNPMSVGRTAPFHLRIMYVHESTQ FT GRTILKFQMRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNGLAN FT IGFISLVNLVFVVRYLPRVCSWIDEVDTVDCNDDVKILLY" FT CDS complement(1225..1671) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J7EPK0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J7EPK0" FT /protein_id="ADZ96552.1" FT /translation="MSNLPSGLKRKCPIQEPLHAEAKKVKRKVPETRTRIVWKGCGCSA FT FITTTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTVPSQNYVCPREHTGENHP FT QIPNEGQLQGKEATGIPQDLPPIQDLDDPTNWCYSQLDWYFGTP" FT CDS complement(1580..2674) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J7EM26" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J7EM26" FT /protein_id="ADZ96553.1" FT /translation="MAPPKRFRISSKNYFITYPRCSLSKEDCLAQLLHIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQEALKNWATANAIFCDVQSPF FT WTQEEVSHSGATARRGEEGQEESS" FT CDS complement(2260..2517) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F2X5F5" FT /protein_id="ADZ96554.1" FT /translation="MGNLTSMCWCSSKVNSSAQIADSSTLSHPQGRITFTPTSRELNPR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2828 BP; 737 A; 585 C; 682 G; 824 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccacttg gagccaacgc gtcttttccg 60 tactctcttt aatgatgaca ttgctttata aggaccaatg atgttccagt cttggtcgcc 120 aagtatggat caattgtggg accctttgtt gaacccacta ccagatactt tatacggttt 180 taggtgtatg ctatccgtaa aatacttgca aagtattttg aaaaaatacg agccaggaac 240 cctagggttc gagctctgtt cggagttaaa ccgtatcttc agggtcaggc agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc catatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgac cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caagatggat gtcccacata 540 gtgggacctt tgtttgtgta tctgatttta caagggggac tggtcttacc catcgtttgg 600 gtaagagggt gtgtattaag tccatgggta ttgatggtaa ggtttggatg gatgacaacg 660 tcgccaagag ggaccacacc aacatcatta cttactggtt gatccgagat aggaggccca 720 ataaggatcc attgacgttt tcccaggcgt ttacaatgta tgataacgag cccactactg 780 ctaagatccg aatggatctg agagatagaa tgcaggtgtt gaagaaattt tctgttacag 840 ttactggtgg tccttataac cacaaggagc aggcattagt taggaagttt tttaggagtt 900 tgtataatca tgttacttac aatcacaagg aagaagctaa gtatgagaat caattagaga 960 atgcacttat gttgtatagt gctagtagtc atgctagtaa tcccgtgtat cagaccctgc 1020 gttgcagggc ttatttctat gattcgcaca ataattaata aaattatatt ttattaatag 1080 agtaatatct ttacatcatc attacaatct accgtatcta cttcatctat ccaagaacat 1140 actcttggaa gatatctaac aacaaaaact aaattaacta gactaataaa ccctatattt 1200 gctaatccat tacatatgcg ccatttaagg cgttccaaaa taccagtcca actgtgaata 1260 gcaccagtta gtcgggtcgt caagatcctg aattggagga agatcttgtg gaatcccagt 1320 tgcctccttt ccctgtagtt gaccctcatt tggaatttga ggatggttct cccctgtgtg 1380 ctctcgtgga catacataat tctgagatgg aacggtgcag tccgacccac agacatgggg 1440 ttggtgtcga attctagtgc tctcgtagtc tgagcatgac ttagtgattc ccctgtgcgt 1500 gaatccatgc tggtacttgc aggttgtggt gatgaaggct gaacagccgc aacccttcca 1560 cactatcctc gtccttgttt caggaacttt cctcttgacc ttcttcgcct ctgcgtgcag 1620 tggctcctga atgggacact tcctcttgag tccagaaggg agattggaca tcgcagaata 1680 tagcgtttgc tgttgcccaa ttcttgagtg cttcttgctc tggcttgtcc agccagagtt 1740 taaatgaaga gccttctcct ggattgcaga ggaagatagt gggtattccg cctttaattt 1800 gaactggctt tccgtattta cagttggatt gccagtcctt ctgggccccc atgaattctt 1860 taaagtgctt taggtattgg gggttgacgt catcaatgac gttataccaa gcactgttgc 1920 tgtacacttt tgggctaaga tctaaatgcc cacacaaata attgtgaggg cccaaagacc 1980 tggcccatac tgttttgcct attctgcttg ggccttcaat aacaatggat atgggtctat 2040 ccggccgcgc agcggaatcc atgacatttt cagcggccca gtcgctgata atgtcaggaa 2100 cggcattgaa agaagatgaa gaaaaagggg aagaatatac agaaggtgga ggagaaaaaa 2160 tcctatctaa attagaaact aaattatgat attgaaataa atatttttca gggagtttct 2220 ccctaattat ttgcaacgca gcttctttag aacctgcgtt tagagcctct gcggctgcgt 2280 cgttagcagt ctgctgacct cctctagcag atctgccgtc gacctggaat tcaccccagg 2340 tgagggtatc cccgtcctta tcaacgtagg acttgacatc ggacgaggat ttagctccct 2400 ggatgttggg gtgaaagtga ttcgaccttg tgggtgagac aaggtcgaag aatctgctat 2460 ttgtgcagac gaatttacct tcgaactgca ccagcacatg gaggtgaggt tccccatcct 2520 cgtgcagttc tttggctatg tgtatgtatt ttttgttggt tggggtttgg atgtgtagta 2580 gttgggctag gcagtcctct ttagagagag aacagcgtgg ataagtaatg aaatagtttt 2640 ttgaagaaat tctaaaacgt ttgggcggag ccatttggtg acactcagac tttcaaatga 2700 attggtgact ggtgacaatt tatactatgt caccaaatgg cattttggta atttagaaga 2760 tccttttagc tttaattcaa attccgacaa ctctgggtcc acctaaaggc gggcaccgta 2820 ttaatatt 2828 //