ID HQ393454; SV 1; circular; genomic DNA; STD; VRL; 2834 BP. XX AC HQ393454; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato golden vein associated virus isolate SPGVaV-RO[BR:OPO:08], DE complete genome. XX KW . XX OS Sweet potato golden vein associated virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2834 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2834 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2834 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; c2841a354b2152c46006680d9d2fd583. XX FH Key Location/Qualifiers FH FT source 1..2834 FT /organism="Sweet potato golden vein associated virus" FT /host="Ipomoea batatas" FT /strain="Rondonia" FT /isolate="SPGVaV-RO[BR:OPO:08]" FT /mol_type="genomic DNA" FT /country="Brazil:Rondonia" FT /lat_lon="11.5 S 63.1 W" FT /collected_by="Joao Bosco Silva" FT /collection_date="2008" FT /clone="337Eco2" FT /db_xref="taxon:688540" FT CDS 98..469 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J9PEI4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:J9PEI4" FT /protein_id="ADZ96543.1" FT /translation="MLFQSWSPSMTDLWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 294..1058 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J9PED3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9PED3" FT /protein_id="ADZ96544.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRVPKGCVGPCKVQDYEFKMDVPHRGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFDQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSLNN" FT CDS complement(1074..1508) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PE85" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PE85" FT /protein_id="ADZ96545.1" FT /translation="MDSRTGESLNRAQTTRALEFDTNPMSAGRTAPFHLRLMYVHESAQ FT GRTIIKFQMRVNYRERKQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNELAS FT LGFLSLVNLVFVFRYLPRVCSWIDEVDTIDCTDDVKILLY" FT CDS complement(1225..1671) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J9PEN5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9PEN5" FT /protein_id="ADZ96546.1" FT /translation="MSNLPSGIKRKCPIQEPLHAAEKKAKRKVPESRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIPPETDVRPRERTGENHH FT QIPNEGQLPGEETTWFPQDLPAIQDIDDPANWCYSQLDWYFGTP" FT CDS complement(1580..2674) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J9PEW3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9PEW3" FT /protein_id="ADZ96547.1" FT /translation="MPRAGRFNINAKNYFLTYPQCSISKEEALAQIQNIPTAVNKKYIK FT ICRELHEDGQPHLHVLLQFEGKFQCTNQRLFDLVSQTRSAHFHPNIQRAKSSSDVKSYV FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGNKDAALQIIREKLPEKFIFQYH FT NLVSNLDRIFSPPPSVYSSPFSISSFNNVPDIISDWAAENVMDAAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WNQEEVSNSGATARSREEGQEESS" FT CDS complement(2260..2517) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J7EL35" FT /protein_id="ADZ96548.1" FT /translation="MGNLISMCFCNSKANSSARTNAYSTWSLKPGQHISILTFKELNPA FT PTSSPTSIRMETHWNGANSRSTADLLEEASRLLTTQQQKH" XX SQ Sequence 2834 BP; 749 A; 574 C; 660 G; 851 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccactta gaaacaacgc gtcttttccg 60 tactctcttt aattatgaca ttgctttata aggaccaatg ctgttccagt cttggtcgcc 120 aagtatgact gatttgtggg atcctttgca gaacccacta ccagatactt tatacggttt 180 taggtgtatg ctatccgtaa aatacttgca aagtattttg aaaaaatacg agccaggaac 240 cctagggttc gaactctgtt cggagttaat ccgtatcttc agggtcaggc agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc cgtatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgac cgcgtcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caagatggac gttcctcaca 540 ggggaacgtt tgtgtgtgtt tcggatttta caagggggac tgggcttacc catcgccttg 600 gtaagcgtgt ttgtgttaag tcaatgggta tcgatgggaa ggtctggatg gatgacaatg 660 ttgcgaagag agatcacacc aatatcatca cgtattggtt gattcgtgac aggaggccca 720 ataaggatcc actgaacttt gatcaagtat tcaccatgta tgacaatgag ccgactactg 780 ctaagattcg aatggatctg agagatagaa tgcaggtgtt gaagaagttc tcagttacag 840 tttcaggagg tccatacaat cataaggagc aggcattagt taggaagttt tttaagggtt 900 tgtataatca tgtgacttat aatcacaaag aagaagctaa atatgagaat cagttagaaa 960 atgctcttat gctgtatagt gctagcagtc atgctagtaa tcctgtgtat cagaccctgc 1020 gttgcagggc ttatttttat gattcactca ataattaata aacttttatt ttattaatac 1080 agtaatatct ttacatcatc agtacagtcg attgtatcta cttcatctat ccaagaacat 1140 actcttggaa gatatctaaa aacaaaaact aaattaacta gactaagaaa ccctaaacta 1200 gctaattcat tacagattcg ccatttaagg cgttccaaaa taccagtcca gctgtgaata 1260 gcaccagtta gccgggtcgt caatatcctg aattgcagga agatcttgtg gaaaccaagt 1320 tgtttcctct cccggtagtt gaccctcatt tggaatttga tgatggttct cccctgtgcg 1380 ctctcgtgga cgtacatcag tctcaggtgg aatggtgcag tccgacccgc agacatgggg 1440 ttggtgtcga attctagtgc tctcgtagtc tgagcacgat ttagtgattc ccctgtgcgt 1500 gaatccatgt tggaatttgc aggtttgggt tatgaaggct gaacagccgc aacccttcca 1560 cactatcctc gtccttgatt caggaacttt cctcttggcc ttcttctctg ctgcgtgcag 1620 tggctcctga attggacact tcctcttgat tccagaaggg agattggaca tcgcagaata 1680 tagcgtttgc tgttgcccaa ttcttgagtg ctccttgctc tggtttgtct agccagagtt 1740 taaatgagga accctctcct ggattgcaaa ggaagatagt gggaattccg cctttaattt 1800 gaactggctt tccgtattta cagtttgatt gccagtcctt ctgggccccc ataaattctt 1860 taaagtgctt taggtattgg gggttgacgt catcaatgac gttataccaa gcactgttgc 1920 tatacacctt tggactaaga tctaaatggc cacacagata attatgtggg cctaatgatc 1980 tagcccaaac tgttttacct attctacttg ggccttctat aactatactt atgggcctat 2040 ctggccgcgc agcggcatcc atgacattct cagcagccca atcactgata atgtcaggaa 2100 cattattgaa agaagaaatg gaaaaaggtg aagaataaac agaaggagga ggagaaaaaa 2160 tcctatctaa attgctaact aaattatgat attgaaatat aaatttttca gggagtttct 2220 ccctgattat ttgtaaagca gcgtccttat ttcctgcatt taatgcttct gctgctgcgt 2280 cgttagcagt ctgctggcct cctctagcag atctgccgtc gacctggaat tcgccccatt 2340 ccaatgtgtc tccatcctta tcgacgtagg acttgacgtc ggagctggat ttagctcttt 2400 gaatgttagg atggaaatgt gctgacctgg tttgagagac caggtcgaat aggcgttggt 2460 tcgtgcactg gaatttgcct tcgaattgca gaagcacatg gagatgaggt tgcccatctt 2520 cgtgtagttc cctgcagatt ttaatgtatt ttttatttac tgcagttggg atattttgga 2580 tttgggctaa tgcttcttct ttggagatag agcattgggg atatgtaaga aaataatttt 2640 tggcatttat attgaacctc ccagctctcg gcattttaac aagcaatggg tggacacaca 2700 aactctatat gaattggtgg aagggtggac aatttatatg tgtccaccta atggcatttt 2760 ggtaattaga acaactttaa tttgaattca gaaatcttat tggttcgcca taaagcgggc 2820 accgtattaa tatt 2834 //