ID HQ393452; SV 1; circular; genomic DNA; STD; VRL; 2835 BP. XX AC HQ393452; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato golden vein associated virus isolate SPGVaV-RO[BR:PV1:08], DE complete genome. XX KW . XX OS Sweet potato golden vein associated virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2835 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2835 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2835 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; dff645635a4ca13e1cf265b11aa339e1. XX FH Key Location/Qualifiers FH FT source 1..2835 FT /organism="Sweet potato golden vein associated virus" FT /host="Ipomoea batatas" FT /strain="Rondonia" FT /isolate="SPGVaV-RO[BR:PV1:08]" FT /mol_type="genomic DNA" FT /country="Brazil:Sergipe" FT /lat_lon="7.21 S 46.37 W" FT /collected_by="Joao Bosco Silva" FT /collection_date="2008" FT /clone="325Ssac10" FT /db_xref="taxon:688540" FT CDS 99..470 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J7EL31" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:J7EL31" FT /protein_id="ADZ96531.1" FT /translation="MLFQSWSPSMAELWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 295..1059 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J9PEW0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9PEW0" FT /protein_id="ADZ96532.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHRGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFDQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEANYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSQNN" FT CDS complement(1075..1509) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEI3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEI3" FT /protein_id="ADZ96533.1" FT /translation="MDSHTGESLNRAQTMRALEFDTNPMSAGRTAPFHLRLMYVHESAQ FT GRTILKFQMRVNYRERKQLGFHKIFLQFRISTTRLTGAIHSWTGILERLKWRLCNELAS FT LGFLSLVNLVFVIRYLPRVCFWIDEVDTIDCTDDVKVLLY" FT CDS complement(1226..1672) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J7EPX7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J7EPX7" FT /protein_id="ADZ96534.1" FT /translation="MSNLPSGIKRKCPIQEPLHAEAKKAKRKVPESRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIPPETDVRPRERTGENHP FT QIPNEGQLPGEETTWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1581..2675) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J9PE84" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9PE84" FT /protein_id="ADZ96535.1" FT /translation="MPRAGRFNINAKNYFLTYPQCSISKEEALAQIQNIPTAVNKKFIK FT ICRELHEDGQPHLHVLLQFEGKFQCTNQRLFDLVSQTRSAHFHPNIQRAKSSSDVKSYV FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGSKDAALQIIREKLPEKFIFQYH FT NLLSNLDRIFSPPPSVYSSPFSISSFNNVPDIISDWAAENVMDAAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WNQEEVSNSGATARRSEEGQEESS" FT CDS complement(2261..2518) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J7EL35" FT /protein_id="ADZ96536.1" FT /translation="MGNLISMCFCNSKANSSARTNAYSTWSLKPGQHISILTFKELNPA FT PTSSPTSIRMETHWNGANSRSTADLLEEASRLLTTQQQKH" XX SQ Sequence 2835 BP; 745 A; 587 C; 666 G; 837 T; 0 other; accggtgccc gccgcgccct ttaaaaagtg ggccccacca attaacaacg cgtctttgcc 60 gtactctctt taatgatgac attgctttat aaggaccaat gctgttccag tcttggtcgc 120 caagtatggc tgaattgtgg gaccctttgc agaacccact accagatact ttatacggtt 180 ttcggtgtat gctatccgta aaatacttgc aaagtatttt gaaaaaatac gagccaggaa 240 ccctagggtt cgagctctgt tcggagttaa tccgtatctt cagggtcagg cagtatgaca 300 gggcgaatgc gcgttacgca gagatttcat ccgtatgggg ggagaccggt aagacggagg 360 ctgaacttcg agacagctat cgtgccctac actgggaatg ctgtcccaat tgctgcccga 420 agctatgtcc cggtttcaag aggcgtccgg atgaagagaa agaggggtga ccgcatcccg 480 aagggatgtg ttggtccctg taaggtccag gactatgagt tcaagatgga cgttcctcac 540 aggggaacgt ttgtctgtgt ctcggatttt acaaggggga ctgggcttac ccaccgcctt 600 ggtaagcgtg tttgtgttaa gtcaatgggt atcgatggga aggtctggat ggatgacaat 660 gttgcgaaga gagatcacac caatatcatc acgtattggt tgattcgtga caggaggccc 720 aataaggatc cactgaactt tgatcaagta ttcaccatgt atgacaatga gccgactact 780 gctaagattc gaatggatct gagagataga atgcaggtgt tgaagaagtt ctcagttaca 840 gtttcaggag gtccatacaa tcataaggag caggcattag ttaggaagtt ttttaagggt 900 ttgtataatc atgtgactta taatcacaaa gaagaagcta actatgagaa tcagttagaa 960 aatgctctta tgctgtatag tgctagcagt catgctagta atcctgtgta tcagaccctg 1020 cgttgcaggg cttattttta tgattcacaa aataattaat aaacttttat tttattaata 1080 cagtaatacc tttacatcat cagtacagtc gattgtatct acttcatcta tccaaaaaca 1140 tactcttgga agatatctaa taacaaaaac taaattaact agactaagaa accctaaact 1200 agctaattca ttacataatc gccatttaag gcgttccaaa ataccagtcc agctgtgaat 1260 agcaccagtt agccgggttg tcgatatcct gaattgcagg aagatcttgt ggaaaccaag 1320 ttgtttcctc tcccggtagt tgaccctcat ttggaatttg aggatggttc tcccctgtgc 1380 gctctcgtgg acgtacatca gtctcaggtg gaatggtgca gtccgacccg cagacatggg 1440 gttggtgtcg aattctagtg ctctcatagt ctgagcacga tttagtgatt cccctgtgtg 1500 tgaatccatg ctggaacttg caggtttggg ttatgaaggc tgaacagccg caacccttcc 1560 acactatcct cgtccttgat tcaggaactt tcctcttggc cttcttcgct tctgcgtgca 1620 gtggctcctg aattggacac ttcctcttga ttccagaagg gagattggac atcgcagaat 1680 atagcgtttg ctgttgccca attcttgagt gctccttgct ctggtttgtc tagccagagt 1740 ttaaatgagg aaccctctcc tggattgcag aggaagatag tgggaattcc gcctttaatt 1800 tgaactggct ttccgtattt acaattgctt tgccagtcct tctgggcccc catgaactct 1860 ttaaagtgct ttaggtattg ggggttgacg tcatcaatga cgttatacca agcactgttg 1920 ctatacacct ttggactcag gtccaaatgc ccacacagat aattatgtgg gcctaaggat 1980 ctagcccaaa ctgttttacc tattctactt gggccttcta taactatact tatgggccta 2040 tctggccgcg cagcggcatc catgacattc tcagcagccc aatcactgat aatgtcagga 2100 acattattga aagaagaaat ggaaaaaggt gaagaataaa cagaaggagg aggagaaaaa 2160 atcctatcta aattgctaag taaattatga tattgaaata taaatttttc agggagtttc 2220 tccctgatta tttgtaaagc agcgtcctta cttcctgcat ttaatgcttc tgctgctgcg 2280 tcgttagcag tctgctggcc tcctctagca gatctgccgt cgacctggaa ttcgccccat 2340 tccaatgtgt ctccatcctt atcgacgtag gacttgacgt cggagctgga tttagctctt 2400 tgaatgttag gatggaaatg tgctgacctg gtttgagaga ccaggtcgaa taggcgttgg 2460 ttcgtgcact ggaatttgcc ttcgaattgc agaagcacat ggagatgagg ttgcccatct 2520 tcgtgtagtt ccctgcagat tttaatgaat tttttattta ctgcagttgg gatattttgg 2580 atttgggcta atgcttcttc tttggagata gagcattggg gatatgtaag aaaataattt 2640 ttggcattta tattgaacct cccggctctc ggcattttag aaagctatgg gtggacacac 2700 aaactctata tgaattggtg gaagggtgga caatttatat gtgtccacct aatggcattt 2760 tggtaattag aacaacttta atttgaattc ggaaatccta ttggtccgcc ataaagcggg 2820 caccgtatta atatt 2835 //