ID HQ393444; SV 1; circular; genomic DNA; STD; VRL; 2834 BP. XX AC HQ393444; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato golden vein associated virus isolate SPGVaV-PB1[BR:CA:08], DE complete genome. XX KW . XX OS Sweet potato golden vein associated virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2834 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2834 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2834 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 225fb957668cb8dd789157ef5747b5fe. XX FH Key Location/Qualifiers FH FT source 1..2834 FT /organism="Sweet potato golden vein associated virus" FT /host="Ipomoea batatas" FT /strain="Paraiba1" FT /isolate="SPGVaV-PB1[BR:CA:08]" FT /mol_type="genomic DNA" FT /country="Brazil:Bahia" FT /lat_lon="12.41 S 39.06 W" FT /collected_by="Joao Bosco Silva" FT /collection_date="2008" FT /clone="171Bam3" FT /db_xref="taxon:688540" FT CDS 98..469 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J9PEC6" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:J9PEC6" FT /protein_id="ADZ96483.1" FT /translation="MLFQSWSPSMAELWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSIWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 294..1058 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J9PE79" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:J9PE79" FT /protein_id="ADZ96484.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTTYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1074..1508) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEM8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEM8" FT /protein_id="ADZ96485.1" FT /translation="MDSRTGESLSHAQTTRALEFDTNPMSVGRTAPFHLRIMYVHESTQ FT GRTILKFQLRVNYRERRQLGFHKIFLQFRIVTTRLTGAIHSWTGILERLKWRICNELAN FT LGFFSLVNLVFVVRYLPRVCSWIDEVDTVDCNDDVKILLY" FT CDS complement(1225..1671) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J9PEV1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9PEV1" FT /protein_id="ADZ96486.1" FT /translation="MSTAPSGYKRKCPTQEPIHTEAKKAKRKVPEQRTRIVWKGCGCSA FT FITTTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTVPSQNYVCPREHTGENHP FT QIPAEGQLQGKEATGIPQDLPPIPDRDDPSNWCYSQLDWYFGTP" FT CDS complement(1580..2674) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J9PEH8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9PEH8" FT /protein_id="ADZ96487.1" FT /translation="MPRAGRFNINAKNYFLTYPQCSISKEEALAQIQNIPTAVNKKFIK FT ICRELHEDGQPHLHVLLQFEGKFQCTNQRLFDLVSQTRSAHFHPNIQRAKSSSDVKSYV FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGSKDAALQIIREKLPEKFIFQYH FT NLVSNLDRIFSPPPSVYSSPFSISSFNNVPDIISDWAAENVMDAAARPDRPISIVIEGP FT SRIGKTVWARSLGQHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQEALKNWAVKNAVFCDVDSPF FT WIQEEVSHSGTNTHRGEEGQEESS" FT CDS complement(2260..2517) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J7EL35" FT /protein_id="ADZ96488.1" FT /translation="MGNLISMCFCNSKANSSARTNAYSTWSLKPGQHISILTFKELNPA FT PTSSPTSIRMETHWNGANSRSTADLLEEASRLLTTQQQKH" XX SQ Sequence 2834 BP; 746 A; 594 C; 658 G; 836 T; 0 other; accggtgccc gccgcgccct tttaaagtgg gccccacttg gagccaacgc gtcttttccg 60 tactctcttt aatgatgaca ttgctttata aggaccaatg ctgttccagt cttggtcgcc 120 aagtatggct gaattgtggg accctttgca gaacccacta ccagatactt tatacggttt 180 taggtgtatg ctatccgtaa aatacttgca aagtattttg aaaaaatacg agccaggaac 240 cctagggttc gagctctgtt cggagttaat ccgtatcttc agggtcaggc agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc catatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgac cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caagatggat gtcccacata 540 gtgggacctt tgtttgtgta tctgatttta caagggggac tggtcttacc catcgtttgg 600 gtaagagggt gtgtattaag tccatgggta tagatggtaa ggtctggatg gatgacaatg 660 tggccaagag agatcacacc aacatcatta cttactggtt gatccgagac aggaggccca 720 ataaggatcc gcttaacttt ggccagatct tcacgacgta cgacaatgag cccactactg 780 ctaagatccg aatggatctg agagatagaa tgcaggtctt gaagaagttc tcggttacag 840 tttcaggagg tccatacagc cacaaggagc aggccttaat taggaagttt tttaagggtt 900 tgtataatca tgttacttac aatcacaagg aagaagctaa gtatgagaat caattagaga 960 atgcacttat gttgtatagt gctagtagtc atgctagtaa tcccgtgtat cagaccctgc 1020 gttgcagggc ttatttctat gattcgcaca ataattaata aaattatatt ttattaatag 1080 agtaatatct ttacatcatc attacaatct acagtatcta cttcatctat ccaagaacat 1140 actcttggaa gatatctaac aacgaaaact aaattaacta aactaaaaaa tcctaaattt 1200 gctaattcat tacatatacg ccatttaagg cgttccaaaa taccagtcca actgtgaata 1260 gcaccagtta gacgggtcgt cacgatccgg aattggagga agatcttgtg gaatcccagt 1320 tgcctccttt ccctgtagtt gaccctcagc tggaatttga ggatggttct cccctgtgtg 1380 ctctcgtgga catacataat tctgagatgg aacggtgcag tccgacccac agacatgggg 1440 ttggtgtcga attctagtgc tctcgtagtc tgagcatgac ttagtgattc ccctgtgcgt 1500 gaatccatgc tggtacttgc aggttgtggt gatgaaggct gaacagccgc aacccttcca 1560 cactatcctc gtcctctgtt caggaacttt cctcttggcc ttcttcgcct ctgtgtgtat 1620 tggttcctga gtgggacact tcctcttgta tccagaaggg gctgtcgaca tcacagaaaa 1680 ctgcgttttt cacagcccag ttcttgagtg cttcttgctc tggcttgtcc agccagagtt 1740 taaatgaaga gccttctcct ggattgcaga ggaagatagt gggtattcca cctttaattt 1800 gaactggctt tccgtattta caattgcttt gccagtcttt ctgggccccc atgaactctt 1860 taaagtgctt taagtattgg gggttgacgt catcaatgac gttataccaa gcactgttgc 1920 tatacacctt tggactcagg tccaaatgcc cacacagata attatgttgg cctaaggatc 1980 tagcccaaac tgttttacct attctacttg ggccttctat aactatactt atgggcctat 2040 ctggccgcgc agcggcatcc atgacattct cagcagccca atcactgata atgtcaggaa 2100 cattattgaa agaagaaatg gaaaaaggtg aagaataaac agaaggagga ggagaaaaaa 2160 tcctatctaa attgctaact aaattatgat attgaaatat aaatttttca gggagtttct 2220 ccctgattat ttgtaaagca gcgtccttac ttcctgcatt taatgcttct gctgctgcgt 2280 cgttagcagt ctgctggcct cctctagcag atctgccgtc gacctggaat tcgccccatt 2340 ccaatgtgtc tccatcctta tcgacgtagg acttgacgtc ggagctggat ttagctcttt 2400 gaatgttagg atggaaatgt gctgacctgg tttgagagac caggtcgaat aggcgttggt 2460 tcgtgcactg gaatttgcct tcgaattgca gaagcacatg gagatgaggt tgcccatctt 2520 cgtgtagttc cctgcagatt ttaatgaatt ttttatttac tgcagttggg atattttgga 2580 tttgggctaa tgcttcttct ttggagatag agcattgggg atatgtaaga aaataatttt 2640 tggcatttat attgaacctc ccggctctcg gcattttaaa aagcaatggg tggacacaca 2700 aactctatat gaattggtgg aagggtggac aatttatatg tgtccaccta atggcatttt 2760 ggtaattaga acaactttaa tttgaattca gaaatcttat tggtccgcca taaagcgggc 2820 accgtattaa tatt 2834 //