ID HQ393442; SV 1; circular; genomic DNA; STD; VRL; 2827 BP. XX AC HQ393442; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-PR[BR:Uru:08], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2827 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2827 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2827 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 7aecd064b177aa873584c7707ba3d3a4. DR EuropePMC; PMC3485178; 23082767. XX FH Key Location/Qualifiers FH FT source 1..2827 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="Puerto Rico" FT /isolate="SPLCV-PR[BR:Uru:08]" FT /mol_type="genomic DNA" FT /country="Brazil:Bahia" FT /lat_lon="14.35 S 39.17 W" FT /collected_by="Joao Bosco Silva" FT /collection_date="2008" FT /clone="134Spe8" FT /db_xref="taxon:100755" FT CDS 97..468 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:H9CJY1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:H9CJY1" FT /protein_id="ADZ96471.1" FT /translation="MLFQSWSPSMAELWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 293..1057 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J7EPJ1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J7EPJ1" FT /protein_id="ADZ96472.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFSQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVTGGPYNHKEQALVRKFFKSLYNHVTYNHKDEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1073..1507) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEC5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEC5" FT /protein_id="ADZ96473.1" FT /translation="MDSRTGESLSHAQTMRALEFDNNPMSAGRTAPFNLRIMYVHESTQ FT GRTILKFQMRVNYRERKQLGFHKIFLQFRISTTRLTGAIHSWTGILERLKWRICNELAS FT LGFLSLVNLVFVIRYLPRVCSWIDEVDTIDCTDDVKVLLY" FT CDS complement(1224..1670) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J9PE77" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9PE77" FT /protein_id="ADZ96474.1" FT /translation="MSNLPSGLKRKCPIQEPLHAEAKKVKRKVPETRTRIVWKGCGCSA FT FITTTCKYQHGFTHRGITKSCSDYESTRIRQQPHVCGSDCPIQSQNNVCPREHTGENHP FT QIPNEGQLQGKETTWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1579..2673) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J9PEM6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9PEM6" FT /protein_id="ADZ96475.1" FT /translation="MAPPKRFKIQAKNYFITYPHCSLSKEDCLAQLLHIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WTQEEVSHSGATARRGEEGQEESS" FT CDS complement(2259..2516) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J9PEU8" FT /protein_id="ADZ96476.1" FT /translation="MGNLTSMCWCSSKVNSSAQIVDSSTLSHPQGRITFTPTSRELNPR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2827 BP; 738 A; 579 C; 678 G; 832 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg accccaccaa atgacaacgc gtcttctccg 60 tactctttta atgatgacat tgctttataa ggaccaatgc tgttccagtc ttggtcgcca 120 agtatggctg aattgtggga ccctttgcag aacccactac cagatacttt atacggtttt 180 aggtgtatgc tatccgtaaa atacttgcaa agtattttga aaaaatacga gccaggaacc 240 ctagggttcg agctctgttc ggagttaatc cgtatcttca gggtcaggca gtatgacagg 300 gcgaatgcgc gttacgcaga gatttcatcc gtatgggggg agaccggtaa gacggaggct 360 gaacttcgag acagctatcg tgccctacac tgggaatgct gtcccaattg ctgcccgaag 420 ctatgtcccg gtttcaagag gcgtccggat gaagagaaag aggggtgacc gcatcccgaa 480 gggatgtgtt ggtccctgta aggtccagga ctatgagttc aagatggatg tcccacatag 540 tggtaccttt gtttgtgtat ctgattttac aagggggact ggtcttaccc atcgtttggg 600 taagagggtg tgtattaagt ccatgggtat tgatggtaag gtttggatgg atgacaacgt 660 cgccaagagg gaccacacta acatcattac ttactggttg atccgagata ggaggcccaa 720 taaggatcca ttgacgtttt cccaggcgtt tacaatgtat gataacgagc ccactactgc 780 taagatccga atggatctga gagatagaat gcaggtgttg aagaaatttt ctgttacagt 840 tacgggtggt ccttataacc acaaggagca ggcattagtt cggaagtttt ttaagagttt 900 gtataatcat gttacttata atcataagga tgaagctaag tatgagaatc atttagaaaa 960 tgctcttatg ctgtattctg ctagcagtca tgctagtaat cctgtgtatc agaccctgcg 1020 ttgcagggct tatttttatg attcacacaa taattaataa acttttattt tattaataca 1080 gtaatacctt tacatcatca gtacagtcga ttgtatctac ttcatctatc caagaacata 1140 ctcttggaag atatctaata acaaaaacta aattaactag actaagaaac cctaaactag 1200 ctaattcatt acagattcgc catttaaggc gttccaaaat accagtccag ctgtgaatag 1260 caccagttag ccgggttgtc gatatcctga attgcaggaa gatcttgtgg aaaccaagtt 1320 gtttcctttc cctgtagttg accctcattt ggaatttgag gatggttctc ccctgtgtgc 1380 tctcgtggac atacattatt ctgagattga atggggcagt ccgacccgca gacatggggt 1440 tgttgtcgaa ttcgagtgct ctcatagtct gagcatgact tagtgattcc cctgtgcgtg 1500 aatccatgct ggtacttgca ggttgtggtt atgaaggctg aacagccaca acccttccac 1560 actatcctcg tccttgtttc aggaactttc ctcttgacct tcttcgcctc tgcgtgcagt 1620 ggctcctgaa tgggacactt cctcttgagt ccagaaggga gattggacat cgcagaatat 1680 agcgtttgct gttgcccaat tcttgagtgc tccttgttct ggtttgtcta gccagagttt 1740 aaatgaggaa ccctctcctg gattgcagag gaagatagtg ggaattccgc ctttaatttg 1800 aactggcttt ccgtatttac agttggattg ccagtccttc tgggccccca tgaattcttt 1860 aaagtgcttt aggtattggg ggttgacgtc atcaatgacg ttataccaag cactgttgct 1920 gtaaactttt gggctaagat ctaaatgccc acacaaataa ttgtgagggc ccaaagacct 1980 ggcccatact gttttgccta ttctgcttgg gccttcaata acaatggata tgggtctatc 2040 cggccgcgca gcggaatcca tgacattttc agcggcccag tcgctgataa tgtcaggaac 2100 ggcattgaaa gaagatgaag aaaaagggga agaatataca gaaggtggcg gagaaaaaat 2160 cctatctaaa ttagaaacta aattatgata ttgaaataaa tatttttcag ggagtttctc 2220 cctaattatt tgcaacgcag cttctttaga acctgcgttt agagcctctg cggctgcgtc 2280 gttagcagtc tgctgacctc ctctagcaga tctgccgtcg acctggaatt caccccaggt 2340 gagggtatcc ccgtccttat caacgtagga cttgacatcg gacgaggatt tagctccctg 2400 gatgttgggg tgaaagtgat tcgaccttgt gggtgagaca aggtcgaaga atctactatt 2460 tgtgcagacg aatttacctt cgaactgcac cagcacatgg aggtgaggtt ccccatcctc 2520 gtgcagttct ttggctatgt gtatgtattt tttgtttgtt ggggtttgga tgtgtagtag 2580 ttgggctagg cagtcctctt tagagagaga acagtgtgga taggtaatga aataattttt 2640 tgcttggatt ttaaaacgtt tgggaggagc catttggaga caaccactag ttcaaatgaa 2700 ttggagactg gagacaatat atagtatgtc tccaaatggc attttggtaa tttagaagat 2760 ccttttagct ttaattcaaa ttccgacaac tctgggtcca cctaaaggcg ggcaccgtat 2820 taatatt 2827 //