ID   HQ389334; SV 1; linear; genomic RNA; STD; VRL; 474 BP.
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AC   HQ389334;
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DT   15-APR-2011 (Rel. 108, Created)
DT   15-APR-2011 (Rel. 108, Last updated, Version 1)
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DE   Turnip vein-clearing virus strain NZ-592 coat protein gene, complete cds.
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KW   .
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OS   Turnip vein-clearing virus
OC   Viruses; Riboviria; Virgaviridae; Tobamovirus.
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RN   [1]
RP   1-474
RA   Cohen D., Chavan R.R., Pearson M.N., Blouin A.G.;
RT   "First report of Turnip vein clearing virus and Ribgrass mosaic virus from
RT   New Zealand";
RL   Unpublished.
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RN   [2]
RP   1-474
RA   Chavan R.R., Pearson M.N.;
RT   ;
RL   Submitted (08-OCT-2010) to the INSDC.
RL   School of Biological Sciences, The University of Auckland, Thomas Building,
RL   Private Bag 92019, Symonds Street, Auckland 1142, New Zealand
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DR   MD5; 39caeae7fd6dbf6795e80ecc33da3812.
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FH   Key             Location/Qualifiers
FH
FT   source          1..474
FT                   /organism="Turnip vein-clearing virus"
FT                   /host="Plantago major"
FT                   /strain="NZ-592"
FT                   /isolate="TP9 271.3"
FT                   /mol_type="genomic RNA"
FT                   /country="New Zealand"
FT                   /collection_date="09-Feb-2010"
FT                   /note="identical sequence found in strain NZ-593 and NZ-594
FT                   from TP9 271.4 isolate subgroup: 3; acronym: TVCV"
FT                   /db_xref="taxon:29272"
FT   CDS             1..474
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F5A0S3"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="UniProtKB/TrEMBL:F5A0S3"
FT                   /protein_id="AEB40345.1"
FT                   /translation="MSYNITNPNQYQYFAAVWAEPIPMLNQCISALSQSYQTQAARDTV
FT                   RQQFSNLLSAVVTPSQRFPETGSRVYVNSAVIKPLYEALMKSFDTRNRIIETEEESRPS
FT                   ASEVANATQRVDDATVAIRSQIQLLLSELSSGHGYMNRAEFEALLPWTTAPAT"
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SQ   Sequence 474 BP; 131 A; 109 C; 119 G; 115 T; 0 other;
     atgtcttaca acattacgaa cccgaatcag taccagtatt tcgcagcggt gtgggcagag        60
     cccataccaa tgcttaacca gtgcatatcg gcattgtcgc aatcgtacca aacacaagca       120
     gcgagagaca ctgttagaca gcaattctca aacttgttaa gtgcggttgt gacaccgagc       180
     cagcggttcc cagaaacagg gtcccgggtg tatgttaact cggctgttat aaagccgtta       240
     tacgaggctc ttatgaagtc ctttgatact agaaatagga tcatagagac ggaagaggag       300
     tcacgcccgt cagcatccga agtagctaac gcaacacagc gtgttgatga cgcgaccgtt       360
     gccattagga gtcaaattca gcttctgctg agtgagcttt ctagtggaca tggttatatg       420
     aatagggcag agttcgaggc tttattgcca tggactactg cacctgctac ttag             474
//