ID   HQ386857; SV 1; linear; genomic DNA; STD; VRL; 1699 BP.
XX
AC   HQ386857;
XX
DT   12-APR-2011 (Rel. 108, Created)
DT   12-APR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Sida golden mosaic Lara virus replication protein (AC1) gene, complete cds;
DE   and capsid protein (AV1) gene, partial cds.
XX
KW   .
XX
OS   Sida golden mosaic Lara virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1699
RA   Zambrano K., Mendez N., Marys E.;
RT   "A new begomovirus infecting Sida sp. in Venezuela";
RL   Unpublished.
XX
RN   [2]
RP   1-1699
RA   Zambrano K., Mendez N., Marys E.;
RT   ;
RL   Submitted (10-OCT-2010) to the INSDC.
RL   CMBC, IVIC, C/Panamericana km 11, Caracas, Caracas 1020-A, Venezuela
XX
DR   MD5; a21cacfa9fca32ad2899fc76868c8f13.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1699
FT                   /organism="Sida golden mosaic Lara virus"
FT                   /segment="A"
FT                   /host="Sida sp."
FT                   /mol_type="genomic DNA"
FT                   /country="Venezuela"
FT                   /collection_date="2009"
FT                   /clone="M3p20"
FT                   /db_xref="taxon:1002681"
FT   gene            complement(232..1314)
FT                   /gene="AC1"
FT   CDS             complement(232..1314)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication protein"
FT                   /note="Rep"
FT                   /db_xref="GOA:F4ZZV0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:F4ZZV0"
FT                   /protein_id="AEB21261.1"
FT                   /translation="MPSKRFQVNQKNYFLTYPKCSLSKEEALSQIKNLSTPVNKKFIKI
FT                   CRELHENGEPHLHVLIQFEGKYRCTNSRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLE
FT                   KDGDTVEWGEFQIDGRSARGGQQSANDSYAKALNADSVESAMRVLKEEQPKDFVLQNHN
FT                   IRSNLERIFAKAPEPWVPPFQLSSFTNVPDEMQEWADDYFGSSPAARPVRPVSLIVEGD
FT                   SRTGKTMWARALGPHNYLSGHLDFNARVFSNDVDYNVIDDVAPHYLKLKHWKELLGAQK
FT                   DWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKDFLNKEENTSLRNWTLKNAVFITLTA
FT                   PLYQESTQTSQEEGNQEKED"
FT   gene            1667..>1699
FT                   /gene="AV1"
FT   CDS             1667..>1699
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="capsid protein"
FT                   /note="CP"
FT                   /db_xref="UniProtKB/TrEMBL:F4ZZV1"
FT                   /protein_id="AEB21262.1"
FT                   /translation="MPKREAPWRSM"
XX
SQ   Sequence 1699 BP; 377 A; 418 C; 409 G; 495 T; 0 other;
     ggagatgcaa cgctctcctc aggttgtggt tgaaccggat ttgtatgctg tacaccctgc        60
     tcgtggtgta tagtggatcc tctactctgt acatcttgaa atagagggga ttttctatct       120
     cccagatata cacgccattc tctgcctgac gtgcagtgat gatttcccct gtgcgtgaat       180
     ccatggcccg tgcagtctat gtggaagtag atggagcaac cgcactgaag atcaatcctc       240
     cttctcctga ttgccctcct cttggctcgt ctgtgtgctt tcttgataga ggggggctgt       300
     gagggtgatg aagaccgcat tctttagagt ccagttcctg agggaggtgt tttcctcctt       360
     gttcaggaaa tctttatagc tggcaccctc accaggattg cagagcacga ttgctgggat       420
     cccaccttta atttgaactg gcttgccgta cttgcaattt gactgccaat ccttttgggc       480
     cccgagtagt tctttccagt gctttagctt taggtaatgc ggagcgacgt catcaatgac       540
     gttataatcc acatcgttcg agaacactcg ggcattgaag tcaaggtgac cgctgagata       600
     attatgtgga cccaacgcac gagcccacat cgtcttcccc gtcctcgagt caccttcaac       660
     aatcaaactt actggtctta ctggccgcgc agcgggactg ctcccaaaat aatcatccgc       720
     ccactcttgc atctcgtcgg gcacgttagt gaaagaggag agttgaaacg gaggaaccca       780
     tggctccgga gcctttgcga atatcctttc gaggttggag cggatgttat gattctgcag       840
     gacaaagtct tttggctgct cctcctttaa cacccgcatg gcagattcaa cagaatctgc       900
     atttaacgcc ttggcatatg aatcattagc agactgctgg cctcctctag cagatctgcc       960
     gtcgatctgg aattctcccc attcaactgt gtctccgtcc ttctcgagat aggacttgac      1020
     gtcggagctg gatttagctc cctgtatgtt tggatggaaa tgtgctgacc gggttgggga      1080
     gaccagatcg aagaatctgc tattcgtgca cctgtatttg ccctcgaact ggataagtac      1140
     atggagatga ggctcaccat tttcatgcag ttctcggcag atcttgatga acttcttgtt      1200
     caccggagtg gataggtttt taatttggga aagtgcttct tctttgctaa gagagcactt      1260
     tggatatgtt aggaaatagt ttttctgatt tacctggaaa cgcttcgatg gcatttttgt      1320
     aataagaggg gtgtgtacca attgagctct ctctcaaaac tccatatgaa ttggtacaca      1380
     ggtacacaat atatagtaga accctcattc accgatttgc accaccgtgg cggccatccg      1440
     ctctaatatt accggatggc cgcgcgattt ttcccccccc tacgtggagc tctggtggcc      1500
     gcgcgatccc ctcgcgcttt tcctttaatt tgaattaaag cggacagctt tcgtcttgtc      1560
     caatgatatt gcgcctgtcg catctagata tctgcaacaa cttgggccct aagttgttgg      1620
     ccggttataa attaaaggtt tattgggcca cattctttaa gtcaaaatgc ctaagcggga      1680
     agccccatgg cgttctatg                                                   1699
//