ID HQ343232; SV 2; linear; genomic RNA; STD; VRL; 2219 BP. XX AC HQ343232; XX DT 27-MAR-2011 (Rel. 108, Created) DT 26-JUL-2012 (Rel. 113, Last updated, Version 2) XX DE Cucumber mosaic virus clone KKG-MP segment RNA3, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-2219 RA Gautam K.K., Raj S.K., Snehi S.K.; RT "Molecular detection and identification of Cucumber mosaic virus infecting RT Brinjal (Solanum melongena L.) in India"; RL Unpublished. XX RN [2] RP 1-2219 RA Gautam K.K., Raj S.K., Snehi S.K.; RT ; RL Submitted (06-OCT-2010) to the INSDC. RL Plant Molecular Virology, National Botanical Research Institute, Rana RL Pratap Marg, Lucknow, U.P. 226001, India XX RN [3] RC Nucleotide and amino acid sequences updated by submitter RP 1-2219 RA Gautam K.K., Raj S.K., Snehi S.K.; RT ; RL Submitted (25-JUL-2012) to the INSDC. RL Plant Molecular Virology, National Botanical Research Institute, Rana RL Pratap Marg, Lucknow, U.P. 226001, India XX DR MD5; 3c90778924794e9d46a11f5a581c4870. DR EuropePMC; PMC3889230; 24426321. DR EuropePMC; PMC4188193; 25674612. XX CC On Jul 25, 2012 this sequence version replaced gi:326632008. XX FH Key Location/Qualifiers FH FT source 1..2219 FT /organism="Cucumber mosaic virus" FT /segment="RNA3" FT /host="Solanum melongena L. (eggplant)" FT /lab_host="Nicotiana tabacum cv. White Burley" FT /mol_type="genomic RNA" FT /country="India:Lucknow, U.P." FT /collected_by="K.K. Gautam" FT /collection_date="27-Apr-2010" FT /clone="KKG-MP" FT /db_xref="taxon:12305" FT CDS 123..962 FT /codon_start=1 FT /product="3a movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:F2X6W0" FT /protein_id="ADZ99008.1" FT /translation="MAFQSTSRTLTQQSSAATSDDLQKILFSPEAIKKMAAECDLGRHH FT WMRADNAISVRPLVPEVTHGRIVSFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE FT GSLRIYLADLGDKELSPIDGQCVSLHNHELPALVSFQPTYDCPMETVGNRKRCFAVVIE FT RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEHTKPSAVARLLK FT SQLNNIESSQYVLTDSKINQNARSESEELNVESPSVAIGSSSASRSNPFTPQEVTGL" FT CDS 1261..1917 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:E3UNA3" FT /db_xref="InterPro:IPR000247" FT /db_xref="InterPro:IPR023800" FT /db_xref="InterPro:IPR037137" FT /db_xref="UniProtKB/TrEMBL:E3UNA3" FT /protein_id="AFO59564.1" FT /translation="MDKSESISAGRNRRRRPRRGSRSASSSADATFRVLSQQLSRLNKT FT LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDKGSYYGKRLLLPDSVTEFDKKLV FT SRIQIRVNPLLKFDSTVWVTVRKVPASSDLSVSAISAMFADGASPVLVYQYAASGVQAN FT NKLLYDLSVMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSSVLPV" XX SQ Sequence 2219 BP; 512 A; 521 C; 526 G; 660 T; 0 other; gtaatcttac cactgtgtgt gtgcggtctg tgtgtgtgtc gcgtcgtgtc gagtcgtgtt 60 gtccgcacat ttgagtcgtg ctgtccgcac atttttattt cagtgtgtta gattcccgag 120 gcatggcttt ccaaagtacc agcaggactt taactcaaca gtcctcagcg gctacgtctg 180 acgatcttca gaagatatta tttagccctg aagccattaa gaaaatggct gctgagtgtg 240 acctaggccg gcatcattgg atgcgcgctg ataatgcgat atcagtccgg cccctcgttc 300 ccgaagtaac ccatggtcgt attgtttctt tctttaagtc tggatatgat gtcggtgaat 360 tgtgctctaa aggatatatg agcgttcctc aagtgttatg cgctgttact cgaacagttt 420 ctactgacgc tgagggatct ttgagaattt acctggctga tctaggcgat aaggagttat 480 ctcctataga tggacaatgc gtttcattac ataaccatga gcttcccgct ttagtgtctt 540 tccagccgac gtatgattgt cctatggaaa ctgttgggaa tcgtaagcgg tgttttgctg 600 ttgtcatcga aagacatggt tatattgggt ataccggcac cacagcaagc gtgtgtagta 660 attggcaagc acgattttct tctaagaata ataactacac tcatatcgct gctgggaaga 720 ctctagtact gccattcaac agattagctg agcacacgaa accgtcagcc gtcgctcgcc 780 tgttgaagtc gcaattgaat aacatagaat cttcgcaata cgttttaacg gattcgaaga 840 ttaatcaaaa tgcgcgcagt gagtccgagg aattgaatgt tgaaagccct tccgtcgcaa 900 tcggaagttc ttccgcgtcc cgctccaatc cctttacgcc gcaggaagtc accggtcttt 960 agtgttttcg ttgcgtatta gattatatgt atgtgtgagt ctatacataa tactatacct 1020 atagtgtcct gtgtgagttg atacagtaga caactgtgac gcgatgctgt gttgagaaga 1080 aagcacatct ggtctagtaa acccacatct tagctttgag gttcaattcc tcttgctccc 1140 tgatgggtcc ctttactttt catggatgct tctccacgag attgcgtttc gtctacttat 1200 cataagagta ttgtgctgtg attttctctt ttgtgttgta gaattgagtc gagtcgagtc 1260 atggacaaat ctgaatcaat cagtgccggt cgtaatcgtc gacgtcgtcc gcgtcgcggt 1320 tcccgctccg cttcctcctc tgcggatgct acatttagag tcctgtcgca acagctttcg 1380 cgacttaata agacgttagc agctggtcgt cctactatta accacccaac ctttgtgggt 1440 agtgaacgtt gtaaacctgg atacacgttc acctcgatca ccctaaagcc accgaaaata 1500 gacaaagggt cctattatgg caaaaggttg ttacttcctg attcagtcac tgagttcgat 1560 aagaagcttg tttcgcgcat tcaaatccga gttaatcctt tgctgaaatt tgattctacc 1620 gtgtgggtaa cggtccgtaa agttcctgcc tcctccgacc tgtccgtttc cgccatctct 1680 gctatgttcg cggacggagc ctcaccggta ctggtttatc agtatgctgc atctggcgtt 1740 caagccaaca acaaactgtt gtatgatctc tcagtgatgc gcgctgatat tggtgacatg 1800 agaaagtacg ccgtgctcgt gtattcaaaa gacgatgcgc tcgagacgga tgaattagtg 1860 cttcatgttg acatcgagca ccaacgcatt cccacttctt cggtgctccc agtttgaact 1920 cgtgttttcc aggatcctcc ctccgtttct gtggcgggag ctgagttggt agtgttgcta 1980 taaactgacc tgaagtcact aaacgcttcg cggtgaacgg gttgtccatc cagctaacgg 2040 ctaaaatggt cagtcgtgga gaaatccacg ccagtagact tacaagtctc tgaggtgcct 2100 ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacttc cagcacaaga 2160 tgctggtatt agggtacggg catcccccca ctttagtggg ggtctctcaa aggagacca 2219 //