ID HQ333138; SV 1; circular; genomic DNA; STD; VRL; 2795 BP. XX AC HQ333138; XX DT 30-MAR-2011 (Rel. 108, Created) DT 01-JUN-2011 (Rel. 109, Last updated, Version 2) XX DE Sweet potato leaf curl virus isolate US:SC:646B-11, complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2795 RX DOI; 10.1007/s00705-011-0930-2. RX PUBMED; 21302123. RA Zhang S.C., Ling K.S.; RT "Genetic diversity of sweet potato begomoviruses in the United States and RT identification of a natural recombinant between sweet potato leaf curl RT virus and sweet potato leaf curl Georgia virus"; RL Arch. Virol. 156(6):955-968(2011). XX RN [2] RP 1-2795 RA Zhang S., Ling K.-S.; RT ; RL Submitted (30-SEP-2010) to the INSDC. RL U.S. Vegetable Laboratory, United States Department of Agriculture, RL Agricultural Research Service, 2700 Savannah Highway, Charleston, SC 29414, RL USA XX DR MD5; 6d8e749158a324fb40362696a7b62601. XX FH Key Location/Qualifiers FH FT source 1..2795 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /isolate="US:SC:646B-11" FT /mol_type="genomic DNA" FT /country="USA" FT /collection_date="2006" FT /db_xref="taxon:100755" FT gene 92..259 FT /gene="V2" FT CDS 92..259 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:F2X5F6" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:F2X5F6" FT /protein_id="AEA08459.1" FT /translation="MAELWDPLQNPLLDTLYGFRCMLSVKYLQGILKKYEPGTLGFELC FT SELIRIFRVR" FT gene 261..1025 FT /gene="V1" FT CDS 261..1025 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:F2X5F7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:F2X5F7" FT /protein_id="AEA08458.1" FT /translation="MTGRIPVSRRFHPYGGRSVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRSVRMKRRRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLMFVQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT gene complement(1041..1475) FT /gene="Ren" FT CDS complement(1041..1475) FT /codon_start=1 FT /gene="Ren" FT /product="replication enhancer protein" FT /note="C3" FT /db_xref="GOA:F2X5F8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:F2X5F8" FT /protein_id="AEA08456.1" FT /translation="MDSRTGESLSRAQTMRALEFDTNPMSAGQTAPFYLRLMYVHESTQ FT GRTILKFQLKVNYRERKQLGFHKIFLQFRISTTRLIGAIHSWTGILERLKWRICNQLAN FT LGFFSLINLVYVIRHLPESVKWIDEIDTIDCTDDVKVLLY" FT gene complement(1192..1638) FT /gene="Trap" FT CDS complement(1192..1638) FT /codon_start=1 FT /gene="Trap" FT /product="trans-activating protein" FT /note="TrAP; C2" FT /db_xref="GOA:F2X5F9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:F2X5F9" FT /protein_id="AEA08455.1" FT /translation="MSNLPSGLKRKCPIQEPLHAEAKKAKRKVPETRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTILPETDVRPREHTGKNHP FT QIPAQGQLPGEEATWFPQDLPAIQDIDNPANWCYSQLDWYFGTS" FT gene complement(1547..2641) FT /gene="Rep" FT CDS complement(1547..2641) FT /codon_start=1 FT /gene="Rep" FT /product="replication-associated protein" FT /note="C1" FT /db_xref="GOA:F2X5G0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F2X5G0" FT /protein_id="AEA08454.1" FT /translation="MAPPQRFKIQAKNYFITYPRCSLSKEDCLSQLLNIQTPTNKKYIH FT IAKELHEDEEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQFH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIKGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WTQEEVSHSGATARRGEESQEESS" FT gene complement(2227..2484) FT /gene="C4" FT CDS complement(2227..2484) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F2X5G1" FT /protein_id="AEA08457.1" FT /translation="MRNLTSMCWCSSKVNSSAQIADSSTLSHPQGRITFTPTSRELNPR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2795 BP; 722 A; 560 C; 688 G; 825 T; 0 other; accggtgccc gccgcgccct tttaaattgg gccccacacg ctttgcttta attatttaaa 60 ggcgtgcctg gtgcagattt ggtcgccaag tatggctgaa ttgtgggacc ctttgcaaaa 120 cccactacta gatactttat acggtttccg ttgtatgctt tctgtaaaat acctgcaagg 180 tattttgaag aaatacgagc caggaacctt agggttcgag ctctgttcgg agttaatccg 240 tatattcagg gtcaggtagt atgacagggc gaattcctgt ttcgcggaga tttcatccct 300 atggggggag atcggtaaga cggaggctga acttcgagac agctatcgtg ccttacactg 360 ggaatgctgt cccaattgct gcccgaagct atgtcccggt ttcaagaagc gtccggatga 420 agagaaggag gggtgaccgc atcccgaagg gatgtgttgg tccctgtaag gtccaggact 480 atgagttcaa gatggacgtt ccccacacgg gaacgtttgt ctgtgtctct gatttcacaa 540 gggggactgg tcttacccat cgtttgggta agagggtgtg tattaagtcc atgggtatcg 600 atggtaaggt ttggatggat gacaacgtcg ccaagaggga ccacactaac atcattactt 660 actggttgat ccgagatagg aggcccaata aggatccatt gatgtttgtt caggcgttta 720 caatgtatga taatgagccc actactgcta agatccgaat ggatctgaga gatagaatgc 780 aggtgttgaa gaagttttct gttacggttt ctggtggtcc ttataaccac aaagagcagg 840 ctttagttag gaagtttttt aagggtttgt ataatcatgt tacttataac cataaggagg 900 aggccaagta tgagaatcat ttagagaatg cgttaatgtt gtattctgct agcagtcatg 960 ctagcaatcc tgtgtatcag accctgcgtt gcagggctta tttctatgat tcacacaata 1020 attaataaaa ttttatttta ttaatacagt aataccttca catcatcagt acagtcgatt 1080 gtatctattt catctatcca tttgactgat tcaggcagat gcctgattac ataaactaaa 1140 ttaataagag aaaaaaaacc taaattagct aattgattac atattcgcca tttaagacgt 1200 tccaaaatac cagtccagct gtgaatagca ccaattagcc gggttgtcga tatcctgaat 1260 tgcaggaaga tcttgtggaa accaagttgc ttcctctccc ggtagttgac cttgagctgg 1320 aatttgagga tggttcttcc ctgtgtgctc tcgtggacgt acatcagtct caggtagaat 1380 ggtgcagtct gacccgcaga catggggttg gtgtcgaatt ctagtgctct catagtctga 1440 gcacgactta gtgattcccc tgtgcgtgaa tccatgctgg aatttgcagg tttgggttat 1500 gaaggctgaa cagccgcagc ccttccacac tatcctcgtc cttgtttcag gaactttcct 1560 cttggctttc ttcgcctctg cgtgcagtgg ctcctgaatg ggacacttcc tcttgagtcc 1620 agaagggaga ttggacatcg cagaatatag cgtttgctgt tgcccaattc ttgagtgctc 1680 cttgctctgg tttgtctagc cagagtttaa atgaagaacc ctcgcctgga ttgcagagga 1740 agatagtggg aattccgcct ttaatttgaa ctggctttcc gtatttacag ttggattgcc 1800 agtccttctg ggcccccatg aattctttaa agtgctttag gtattggggg ttgacgtcat 1860 caatgacgtt ataccaagca ctgttactgt acactttagg gctaagatct aaatgcccac 1920 acaaataatt gtgagggccc aaagacctgg cccatactgt tttgcctatt ctgcttgggc 1980 ctttaataac aatggatatg ggtctatccg gccgcgcagc ggaatccatg acattttcag 2040 cggcccagtc gctgataatg tcaggaacgg cattgaaaga agatgaagaa aaaggagaag 2100 aatatacaga aggtggagga gagaaaatcc tatctaaatt agaaactaaa ttatgaaatt 2160 gaaataaata tttttcaggg agcttctccc tgattatttg taacgcagct tctttagaac 2220 ctgcgtttag agcctctgcg gctgcgtcgt tagcagtctg ctgacctcct ctagcagatc 2280 tgccgtcgac ctggaattca ccccaggtga gggtatcccc gtccttatca acgtaggact 2340 tgacatcgga cgaggattta gctccctgga tgttggggtg aaagtgattc gaccttgtgg 2400 gtgagacaag gtcgaagaat ctgctatttg tgcagacgaa tttaccttcg aactgcacca 2460 gcacatggag gtgaggttcc tcatcctcgt gcagttcttt ggctatgtgt atgtattttt 2520 tgttagttgg ggtttggata tttaagagtt gggataggca gtcctcttta gagagagaac 2580 agcgtggata agtaatgaaa taatttttgg cttggatttt aaaacgttgt ggaggagcca 2640 tttggagaca ttcataagtt caaatgaatt ggagactgga gacaatatat agtatgtctc 2700 caaatggcat tttggtaatt tagaagatcc ttttagcttt aattcaaatt ccgacaactc 2760 tgggtccacc aaaaggcggg caccgtatta atatt 2795 //