ID HQ333137; SV 1; circular; genomic DNA; STD; VRL; 2797 BP. XX AC HQ333137; XX DT 30-MAR-2011 (Rel. 108, Created) DT 01-JUN-2011 (Rel. 109, Last updated, Version 2) XX DE Sweet potato leaf curl virus isolate US:SC:634-7, complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2797 RX DOI; 10.1007/s00705-011-0930-2. RX PUBMED; 21302123. RA Zhang S.C., Ling K.S.; RT "Genetic diversity of sweet potato begomoviruses in the United States and RT identification of a natural recombinant between sweet potato leaf curl RT virus and sweet potato leaf curl Georgia virus"; RL Arch. Virol. 156(6):955-968(2011). XX RN [2] RP 1-2797 RA Zhang S., Ling K.-S.; RT ; RL Submitted (30-SEP-2010) to the INSDC. RL U.S. Vegetable Laboratory, United States Department of Agriculture, RL Agricultural Research Service, 2700 Savannah Highway, Charleston, SC 29414, RL USA XX DR MD5; 065f9abbc51767b8f34ef533fefd5fa5. XX FH Key Location/Qualifiers FH FT source 1..2797 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /isolate="US:SC:634-7" FT /mol_type="genomic DNA" FT /country="USA" FT /collection_date="2006" FT /db_xref="taxon:100755" FT gene 92..238 FT /gene="V2" FT CDS 92..238 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:F2X5F0" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:F2X5F0" FT /protein_id="AEA08453.1" FT /translation="MAELWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGILGFELH FT VRS" FT gene 263..1027 FT /gene="V1" FT CDS 263..1027 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:F2X5F1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:F2X5F1" FT /protein_id="AEA08452.1" FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRSVRMKRRRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLMFVQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT gene complement(1043..1477) FT /gene="Ren" FT CDS complement(1043..1477) FT /codon_start=1 FT /gene="Ren" FT /product="replication enhancer protein" FT /note="C3" FT /db_xref="GOA:F2X5F2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:F2X5F2" FT /protein_id="AEA08450.1" FT /translation="MDSRTGESLSRAQTMRALEFDTNPMSAGQTAPFYLRLMYVHESTQ FT GRTILKFQLRVNYRKRKQLGFHKIFLQFRISTTRLIGAIHSWTGILERLKWRICNQLAN FT LGFFSLINLVYVIRHLPESVKWIDEVDTINCTDDMKVLLY" FT gene complement(1194..1640) FT /gene="Trap" FT CDS complement(1194..1640) FT /codon_start=1 FT /gene="Trap" FT /product="trans-activating protein" FT /note="TrAP; C2" FT /db_xref="GOA:F2X5F3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:F2X5F3" FT /protein_id="AEA08449.1" FT /translation="MSNLPSGLKRKYPIQEPLHAEAKKAKRKIPETRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTILPETDVRPREHTGENHP FT QIPAQSQLPEEEATWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT gene complement(1549..2643) FT /gene="Rep" FT CDS complement(1549..2643) FT /codon_start=1 FT /gene="Rep" FT /product="replication-associated protein" FT /note="C1" FT /db_xref="GOA:F2X5F4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F2X5F4" FT /protein_id="AEA08448.1" FT /translation="MAPPQRFKIQAKNYFITYPRCSLSKEDCLSQLLNIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFKGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQFH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMEAQKNW FT QSNCKYGKPIQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGTLKNWATANAIFCDVQSPF FT WTQEEVSHSGATARRGEESQEENS" FT gene complement(2229..2486) FT /gene="C4" FT CDS complement(2229..2486) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F2X5F5" FT /protein_id="AEA08451.1" FT /translation="MGNLTSMCWCSSKVNSSAQIADSSTLSHPQGRITFTPTSRELNPR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2797 BP; 723 A; 562 C; 688 G; 824 T; 0 other; accggtgccc gccgcgccct tttaaattgg gccccacacg ctttgcttta attatttaaa 60 ggcgtgcctg gtgcagactt ggtcgccaag tatggctgaa ttgtgggacc ctttgcaaaa 120 cccactacca gatactttat acggtttccg ttgtatgctt tctgtaaaat acctgcaagg 180 tattttgaag aaatacgagc caggaatcct agggttcgag ctccatgttc ggagttaatc 240 cgtatattca gggtcaggca gtatgacagg gcgaattccc gtttcgcgga gatttcatcc 300 ctatgggggg agaccggtaa gacggaggct gaacttcgag acagctatcg tgccttacac 360 tgggaatgct gtcccaattg ctgcccgaag ctatgtcccg gtttcaagaa gcgtccggat 420 gaagagaagg aggggtgacc gcatcccgaa gggatgtgtt ggtccctgta aggtccagga 480 ctatgagttc aagatggacg ttccccacac gggaacgttt gtctgtgtct ctgatttcac 540 aagggggact ggtcttaccc atcgtttggg taagagggtg tgtattaagt ccatgggtat 600 cgatggtaag gtttggatgg atgacaacgt cgccaagagg gaccacacca acatcattac 660 ttactggttg atccgagata ggaggcccaa taaggatcca ttgatgtttg ttcaggcgtt 720 tacaatgtat gataacgagc ccactactgc taagatccga atggatctga gagatagaat 780 gcaggtgttg aagaagtttt ctgttacggt ttctggtggt ccttataacc acaaagagca 840 ggctttagtt aggaagtttt ttaagggttt gtataatcat gttacttata accataagga 900 ggaggccaag tatgagaatc atttagagaa tgcgttaatg ttgtattctg ctagcagtca 960 tgctagcaat cctgtgtatc agaccctgcg ttgcagggct tatttctatg attcacacaa 1020 taattaataa aattttattt tattaataca gtaatacctt catatcatca gtacagttga 1080 ttgtatctac ttcatctatc catttaactg attcaggcag atgcctgatt acataaacta 1140 aattaataag agaaaaaaaa cctaaattag ctaattgatt acatattcgc catttaaggc 1200 gttccaaaat accagtccag ctgtgaatag caccaattag ccgggttgtc gatatcctga 1260 attgcaggaa gatcttgtgg aaaccaagtt gcttcctctt ccggtagttg actctgagct 1320 ggaatttgag gatggttctc ccctgtgtgc tctcgtggac gtacatcagt ctcaggtaga 1380 atggtgcagt ctgacccgca gacatggggt tggtgtcgaa ttctagtgct ctcatagtct 1440 gagcacgact tagtgattcc cctgtgcgtg aatccatgct ggaatttgca ggtttgggtt 1500 atgaaggctg aacagccgca gcccttccac actatcctcg tccttgtttc aggaattttc 1560 ctcttggctt tcttcgcctc tgcgtgcagt ggctcctgaa tgggatactt cctcttgagt 1620 ccagaaggga gattggacat cgcagaatat agcgtttgct gttgcccaat tcttgagtgt 1680 tccttgctct ggtttgtcta gccagagttt aaatgaagaa ccctcgcctg gattgcagag 1740 gaagatagtg ggaattccgc ctttaatttg aattggcttt ccgtatttac agttggattg 1800 ccagttcttc tgggcctcca tgaattcttt aaagtgcttt aggtattggg ggttgacgtc 1860 atcaatgacg ttataccaag cactgttact gtacacttta gggctaagat ctaaatgccc 1920 acacaaataa ttgtgagggc ccaaagacct ggcccatact gttttgccta ttctgcttgg 1980 gccttcaata acaatggata tgggtctatc cggccgcgca gcggaatcca tgacattttc 2040 agcggcccag tcgctgataa tgtcaggaac ggcattgaaa gaagatgaag aaaaaggaga 2100 agaatataca gaaggtggag gagagaaaat cctatctaaa ttagaaacta aattatgaaa 2160 ttgaaataaa tatttttcag ggagcttctc cctgattatt tgtaacgcag cttctttaga 2220 acctgcgttt agagcctctg cggctgcgtc gttagcagtc tgctgacctc ctctagcaga 2280 tctgccgtcg acctggaatt caccccaggt gagggtatcc ccgtccttat caacgtagga 2340 cttgacatcg gacgaggatt tagctccctg gatgttgggg tgaaagtgat tcgaccttgt 2400 gggtgagaca aggtcgaaga atctgctatt tgtgcagacg aatttacctt tgaactgcac 2460 cagcacatgg aggtgaggtt ccccatcctc gtgtagttct ttggctatgt gtatgtattt 2520 tttgttagtt ggggtttgga tatttaagag ttgggatagg cagtcctctt tagagagaga 2580 acagcgtgga taagtaatga aataattttt ggcttggatt ttaaaacgtt gtggaggagc 2640 catttggaga cactcataag ttcaaatgaa ttggagactg gagacaatat atagtatgtc 2700 tccaaatggc attttggtaa tttagaagat ccttttagct ttaattcaaa ttccgacaac 2760 tctgggtcca ccaaaaggcg ggcaccgtat taatatt 2797 //