ID HQ333136; SV 1; circular; genomic DNA; STD; VRL; 2797 BP. XX AC HQ333136; XX DT 30-MAR-2011 (Rel. 108, Created) DT 01-JUN-2011 (Rel. 109, Last updated, Version 2) XX DE Sweet potato leaf curl virus isolate US:SC:634-2, complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2797 RX DOI; 10.1007/s00705-011-0930-2. RX PUBMED; 21302123. RA Zhang S.C., Ling K.S.; RT "Genetic diversity of sweet potato begomoviruses in the United States and RT identification of a natural recombinant between sweet potato leaf curl RT virus and sweet potato leaf curl Georgia virus"; RL Arch. Virol. 156(6):955-968(2011). XX RN [2] RP 1-2797 RA Zhang S., Ling K.-S.; RT ; RL Submitted (30-SEP-2010) to the INSDC. RL U.S. Vegetable Laboratory, United States Department of Agriculture, RL Agricultural Research Service, 2700 Savannah Highway, Charleston, SC 29414, RL USA XX DR MD5; 6f2003abba3321e0b7ba092db63aaad0. XX FH Key Location/Qualifiers FH FT source 1..2797 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /isolate="US:SC:634-2" FT /mol_type="genomic DNA" FT /country="USA" FT /collection_date="2006" FT /db_xref="taxon:100755" FT gene 92..238 FT /gene="V2" FT CDS 92..238 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:F2X5E4" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:F2X5E4" FT /protein_id="AEA08447.1" FT /translation="MVELWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELH FT VRS" FT gene 263..1027 FT /gene="V1" FT CDS 263..1027 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:F2X5E5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:F2X5E5" FT /protein_id="AEA08446.1" FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRSVRMKRRRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFVQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE FT NALMLYSASSYASNPVYQTLRCRAYFYDSHNN" FT gene complement(1043..1477) FT /gene="Ren" FT CDS complement(1043..1477) FT /codon_start=1 FT /gene="Ren" FT /product="replication enhancer protein" FT /note="C3" FT /db_xref="GOA:F2X5E6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:F2X5E6" FT /protein_id="AEA08444.1" FT /translation="MNSRTGESLSRAQTMRALEFDTNPMSAGQTAPFYLRLMYVHESTQ FT GRTILKFQLRVNYREKKQLGFHKIFLQFRISTTRLIGAIHSWTGILERLKWRICNQLAN FT LGFFSLINLVYVIRHLPESIKWIDEVDTIDCTDDVKVLLY" FT gene complement(1194..1640) FT /gene="Trap" FT CDS complement(1194..1640) FT /codon_start=1 FT /gene="Trap" FT /product="trans-activating protein" FT /note="TrAP; C2" FT /db_xref="GOA:F2X5E7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:F2X5E7" FT /protein_id="AEA08443.1" FT /translation="MSNLPSRLKKKCPIQEPLHAEAKKAKRKVPETRTRIMWKGCGCSA FT FITQTCKFQHEFTHRGITKSCSDYESTRIRHQPHVCGSNCTILPETDVRPREHTGENHP FT QIPAQGQLPGEKATWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT gene complement(2047..2643) FT /gene="Rep" FT CDS complement(2047..2643) FT /codon_start=1 FT /gene="Rep" FT /product="truncated replication-associated protein" FT /note="C1" FT /db_xref="GOA:F2X5E8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F2X5E8" FT /protein_id="AEA08442.1" FT /translation="MAPPQRFKIQAKNYFITYPRCSLSKEDCLSQLLNIQTPTNKKYIH FT IAKELHEDGEPHLHVLMQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQVDGRSAKGGQQTANDAAAEALNADSKEAALQIIREKLPEKYLFQFH FT NLISNLDRIFSPPPSVYSSPFSSSSFNAVPDIISD" FT gene complement(2229..2348) FT /gene="C4" FT CDS complement(2229..2348) FT /codon_start=1 FT /gene="C4" FT /product="truncated C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F2X5E9" FT /protein_id="AEA08445.1" FT /translation="MSSPTLIRTEIPSPGVNSRSTADLLKEVSRLLTTQPQRL" XX SQ Sequence 2797 BP; 723 A; 553 C; 688 G; 833 T; 0 other; accggtgccc gccgcgccct tttaaattgg gctccacacg ctttgcttta attatttaaa 60 ggcgtgcctg gtgcagactt ggtcgctaag tatggttgaa ttgtgggacc ctttgcaaaa 120 cccactacca gatactttat acggttttcg ttgtatgctt tctgtaaaat acctgcaagg 180 tattttgaag aaatacgagc caggaaccct agggttcgag ctccatgttc ggagttaatc 240 cgtatattca gggtcaggca gtatgacagg gcgaattccc gtttcgcgga gatttcatcc 300 ctatgggggg agaccggtaa gacggaggct gaacttcgag acagctatcg tgccttacac 360 tgggaatgct gtcccaattg ctgcccgaag ctatgtcccg gtttcaagaa gcgtccggat 420 gaagagaagg aggggtgacc gcatcccgaa gggatgtgtt ggtccctgta aggtccagga 480 ctatgagttc aagatggacg ttccccacac gggaacgttt gtctgtgttt ctgattttac 540 aagggggact ggtcttaccc atcgtttggg taagagggtg tgtattaagt ccatgggtat 600 cgatggtaag gtttggatgg atgacaacgt cgccaagagg gaccacacca acatcattac 660 ttactggttg atccgagata ggaggcccaa taaggatcca ttgacgtttg ttcaggcgtt 720 tacaatgtat gataacgagc ccactactgc taagatccga atggatctga gagatagaat 780 gcaggtgttg aagaagtttt ctgttacggt ttctggtggt ccttataacc acaaagagca 840 ggctttagtt aggaagtttt ttaagggttt gtataatcat gttacttata accataagga 900 ggaggccaag tatgagaatc atttagagaa tgcgttaatg ttgtattctg ctagcagtta 960 tgctagcaat cctgtgtatc agaccctgcg ttgcagggct tatttctatg attcacacaa 1020 taattaataa aattttattt tattaataca gtaatacctt cacatcatca gtacagtcga 1080 ttgtatctac ttcatctatc catttaattg attcaggcag atgcctgatt acataaacta 1140 aattaataag agaaaaaaaa cctaaattag ctaattgatt acatattcgc catttaaggc 1200 gttccaaaat accagtccag ctgtgaatag caccaattag ccgggttgtc gatatcctga 1260 attgcaggaa gatcttgtgg aaaccaagtt gctttttctc ccggtagttg accctgagct 1320 ggaatttgag gatggttctc ccctgtgtgc tctcgtggac gtacatcagt ctcaggtaga 1380 atggtgcagt ttgacccgca gacatggggt tggtgtcgaa ttctagtgct ctcatagtct 1440 gagcacgact tagtgattcc cctgtgcgtg aattcatgct ggaatttgca ggtttgggtt 1500 atgaaggctg aacagccgca gcccttccac attatcctcg tccttgtttc aggaactttc 1560 ctcttggctt tcttcgcctc tgcgtgcagt ggctcctgaa tgggacactt cttcttgagt 1620 ctagaaggga gattggacat cgcagaatat agcgtttgct gttgcccaat tcttgagtgc 1680 tccttgctct ggtttgtcta gccagagttt aaatgaagaa ccctcgcctg gattgcagag 1740 gaagatagtg ggaattccgc ctttaatttg aactggcttt ccgtatttac agttggattg 1800 ccagtccttc tgggccccca tgaattcttt aaagtgcttt aggtattggg ggttgacgtt 1860 atcaatgacg ttataccaag cactgttact gtacacttta gggctaagat ctaaatgccc 1920 acacaaataa ttgtgagggc ccaaagacct ggcccatact gttttgccta ttctgcttgg 1980 gccttcaata acaatggata tgggtctatc cggccgcgca gcggaatcta tgacattttc 2040 agcggctcag tcgctgataa tgtcaggaac ggcattgaaa gaagatgaag aaaaaggaga 2100 agaatataca gaaggtggag gagagaaaat cctatctaaa ttagaaatta aattatgaaa 2160 ttgaaataaa tatttttcag ggagcttctc cctgattatt tgtaacgcag cttctttaga 2220 atctgcgttt agagcctctg cggctgcgtc gttagcagtc tgctgacctc ctttagcaga 2280 tctgccgtcg acctggaatt caccccaggt gagggtatct ccgtccttat caacgtagga 2340 cttgacatcg gacgaggatt tagctccctg gatgttgggg tgaaagtgat tcgaccttgt 2400 gggtgagaca aggtcgaaga atctgctatt tgtgcagacg aatttacctt cgaactgcat 2460 cagcacatgg aggtgaggtt ccccatcctc gtgcagttct ttggctatgt gtatgtattt 2520 tttgttagtt ggggtttgga tatttaagag ttgggatagg cagtcctctt tagagagaga 2580 acagcgtgga taagtaatga aataattttt ggcttggatt ttaaaacgtt gtggaggagc 2640 catttggaga cactcataag ttcaaatgaa ttggagactg gagacaatat atagtatgtc 2700 tccaaatggc attttggtaa tttagaagat ccttttagct ttaattcaaa ttccgacaac 2760 tctgggtcca ccaaaaggcg ggcaccgtat taatatt 2797 //