Dbfetch
ID HQ326086; SV 1; linear; genomic RNA; STD; VRL; 2327 BP. XX AC HQ326086; XX DT 28-MAR-2011 (Rel. 108, Created) DT 28-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Plum pox virus isolate Moscow-1410 polyprotein gene, partial cds. XX KW . XX OS Plum pox virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2327 RX DOI; .1094/PDIS-12-11-1045-RE. RX PUBMED; 30727054. RA Sheveleva A., Ivanov P., Prihodko Y., James D., Chirkov S.; RT "Occurrence and Genetic Diversity of Winona-Like Plum pox virus Isolates in RT Russia"; RL Plant Dis. 96(8):1135-1142(2012). XX RN [2] RP 1-2327 RA Sheveleva A.A., Kwon D.A., Chirkov S.N.; RT ; RL Submitted (29-SEP-2010) to the INSDC. RL Virology, Moscow State University, Leninskie Gori, 1-12, Moscow 119991, RL Russia XX DR MD5; 0d53b5ed398fa52a78bff5a72937b41a. XX FH Key Location/Qualifiers FH FT source 1..2327 FT /organism="Plum pox virus" FT /host="Prunus nigra" FT /lab_host="Nicotiana benthamiana" FT /isolate="Moscow-1410" FT /serotype="W" FT /mol_type="genomic RNA" FT /country="Russia" FT /collection_date="2010" FT /identified_by="S.N.Chirkov" FT /db_xref="taxon:12211" FT CDS <1..2109 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:F2X2W8" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:F2X2W8" FT /protein_id="AEA02823.1" FT /translation="GKDEFVRASCKRLFMGKRGVWNGSLKAELRPKEKVEANKTRSFTA FT APIDTLLGGKVCVDDFNNQFYSLNLHCPWSVGMTKFRGGWDKLLRSLPDGWIYCDADGS FT QFDSSLSPYLINAVLNIRLAFMEEWDIGEQMLSNLYTEIVYTPIATPDGTIVKKFKGNN FT SGQPSTVVDNTLMVILAMTYSLLKLGYHPDTHDCICRYFVNGDDLVLAIHPAYESIYDE FT LQELFSQLGLNYTFTTKTENKEELWFMSHKGMLYEGMYIPKLEPERIVSILEWDRSNEP FT IHRLEAICASMVEAWGYKDLLREIRKFYSWVLEQAPYNALSRDGKAPYIAETALKRLYT FT NEEATETEIERYLEAFYSGSGEDYDSNIVMHQANEEDDDSTIDAGRPALQATTPPSTAT FT APQATATSTQPLQGTTSMFNPIFTPATTQPSVKPTTSATTNPTSFGVVGNESVAPSSSN FT ALTNLGRDRDVDAGSIGTFTVPRLKAMTSKLSLPKVRGKAIMNLNHLAHYNPAQVDLSN FT TRAPQSCFQTWYEGVKRDYEVTDDEMSIILNGLMVWCIENGTSPNINGMWVMMDGETQV FT EYPIKPLLDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYAF FT DFYEMTSTTPVRAREAHIQMKAAALRNVQNRLFGLDGNVGTQEEDTERHTAGDVNRNMH FT NLLGVRGV" FT mat_peptide <1..1116 FT /product="replicase" FT /note="NIb" FT mat_peptide 1117..2106 FT /product="coat protein" FT /note="CP" FT 3'UTR 2110..2327 XX SQ Sequence 2327 BP; 690 A; 476 C; 563 G; 598 T; 0 other; ggaaaagatg aatttgtacg ggctagttgt aagcgtttat tcatgggaaa aagaggagtg 60 tggaatggct cactcaaagc tgagttgcga ccaaaagaga aggttgaggc taataagaca 120 cgctcgttca cagcagcgcc aatcgacact cttcttggtg gcaaggtgtg tgtggatgat 180 ttcaacaatc agttttacag cttgaatctt cattgcccat ggagtgttgg catgacaaaa 240 tttaggggcg gatgggacaa attgttgagg tcacttccag atggatggat ttattgtgat 300 gctgatggat ctcaatttga cagctctctt tctccatact taatcaatgc ggtccttaac 360 atacgtctgg cgtttatgga ggaatgggac attggtgagc agatgctgtc aaacttgtat 420 acagagattg tgtacactcc aatagcgacc cctgatggca ctatcgtcaa gaaattcaag 480 gggaataata gtggtcagcc ttctacggtt gtggataaca cactaatggt catccttgca 540 atgacatact cacttttgaa gctcggatac cacccagaca cacatgattg catttgccgg 600 tattttgtga atggtgatga tttggttctc gcaatccacc cagcatatga gagcatatat 660 gatgaactcc aagagttatt ttctcagctt ggattgaact acacatttac aacaaaaacc 720 gaaaacaagg aagaactctg gttcatgtct cataagggta tgttgtatga aggtatgtac 780 attcccaaat tggaacctga aagaattgtt tcgatactcg agtgggatag atccaatgag 840 ccaattcaca gattggaggc catttgtgca tcaatggtag aggcatgggg atataaagat 900 ctattgagag agattcggaa gttctacagc tgggtacttg aacaagcacc gtataatgcc 960 ctttcaaggg atggcaaagc tccatacata gcggagacag cattgaagag gttgtacacc 1020 aatgaagaag cgactgagac ggagattgaa agatatctcg aagcctttta cagtggttct 1080 ggggaagatt acgactccaa catagtgatg catcaggcaa acgaggaaga tgatgattca 1140 actatagacg caggcaggcc tgctcttcaa gcgacaacac ccccatccac tgcaacggcg 1200 ccacaggcga cagccacatc aactcaaccc ctgcagggca caacgtcaat gttcaacccc 1260 atctttacgc cagcaacaac gcaaccgagc gtaaagccaa ctacatcagc aacaactaac 1320 ccaacatctt ttggcgtggt aggaaatgag agtgtggcac cttcttcttc taatgcactg 1380 accaacctag ggagggatag agacgttgat gcgggttcta tcggaacctt cacagtaccg 1440 cggttgaaag ctatgacttc gaagctatca cttccgaaag ttaggggaaa agccatcatg 1500 aaccttaatc atttggctca ttacaatcct gcacaggttg atctatcaaa cacgcgggct 1560 ccacagtcat gtttccaaac ttggtatgag ggagtgaagc gtgattatga ggtcacagat 1620 gatgaaatga gcattatttt gaacggtctt atggtgtggt gcattgaaaa tgggacctct 1680 ccaaacatta atgggatgtg ggttatgatg gacggagaaa cacaagtgga atatccaata 1740 aagccattgt tggatcatgc gaaacccact tttagacaga ttatggcaca tttcagtaac 1800 gttgctgaag cgtatattga aaagcgaaat tacgagaaag catacatgcc aaggtatgga 1860 attcagcgaa acctgacaga ttacagcctc gccagatatg cctttgattt ctatgagatg 1920 acctcgacaa cacctgtaag ggcacgtgag gcacacattc aaatgaaggc agcagcattg 1980 agaaatgttc agaatcgttt atttggcttg gacggaaatg tcggaacaca agaagaggac 2040 acagagagac acaccgctgg tgatgttaat cgcaacatgc ataacctcct cggggtgagg 2100 ggagtgtagt ggtctcggta tctatcacaa acgtaacttg ggtgagagtc tagtcaccca 2160 attgttttta gattcctgtt agcatccttt tctccgcttt aatagaagca cattcagtga 2220 ggtggtacct ccatatgttc tagtctgtta ttgtcgaaca caggcccttg tatctgatgt 2280 agcgagtgtt tcactccatt cgggttatag ttcttgtgca agagaca 2327 //