ID HQ317134; SV 1; circular; genomic DNA; STD; VRL; 2766 BP. XX AC HQ317134; XX DT 31-MAR-2011 (Rel. 108, Created) DT 31-MAR-2011 (Rel. 108, Last updated, Version 1) XX DE Clerodendrum golden mosaic virus isolate YN1095 segment DNA-A, complete DE sequence. XX KW . XX OS Clerodendron golden mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2766 RA Ding M., Wang Y., Zhang Z.; RT "First report of Clerodendrum golden mosaic virus on Clerodendrum in RT Yunnan, China"; RL Unpublished. XX RN [2] RP 1-2766 RA Ding M., Wang Y., Zhang Z.; RT ; RL Submitted (26-SEP-2010) to the INSDC. RL Institute of Biotechnology and Germplasm Resources, Yunnan Academy of RL Agricultural Sciences, Xueyun Road No. 9, Kunming, Yunnan 650223, China XX DR MD5; 1795b12f1bb3e5e60ef1d3eb0180893c. XX CC GenBank Accession Numbers HQ317134-HQ317135 represent the complete CC genome of Clerodendrum golden mosaic virus isolate YN1095. XX FH Key Location/Qualifiers FH FT source 1..2766 FT /organism="Clerodendron golden mosaic virus" FT /segment="DNA-A" FT /host="Clerodendrum" FT /isolate="YN1095" FT /mol_type="genomic DNA" FT /country="China:Yunnan" FT /collected_by="Ming Ding" FT /collection_date="30-Oct-2009" FT /db_xref="taxon:390438" FT gene 100..459 FT /gene="AV2" FT CDS 100..459 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A5H160" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A5H160" FT /protein_id="AEA10360.1" FT /translation="MLTSHTGLSDMWDPLVNDFPETVHGLRCMLAVKYLKYVESTYSPD FT TLGYDLIRDLILVVRAKNYGEASRRYNHFHTRLQGSTEAELRQPVSEPCACPHCPRHTK FT TVMGQSAHVQEAQDI" FT gene 290..1060 FT /gene="AV1" FT CDS 290..1060 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A5H155" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A5H155" FT /protein_id="AEA10361.1" FT /translation="MAKRAGDIIISTPASKVRRRLNFDSPYQNRVPVLTARGTRKQLWA FT NRPMYRKPRIFKLYRGLDVPRGCEGPCKVQSFEQRHDVAHVGKVICISDVTRGNGITHR FT VGKRFCIKSVYVLGKVWMDENIKVKNHTNSVMFFVVRDRRPYGTPQEFGQVFNTYDNEP FT STATVKNDLRDRFQVIRKFYATVTGGQYASREQTLVRRFIRVNNYVVYNHQEAAKYENH FT TENALLLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1057..1461) FT /gene="AC3" FT CDS complement(1057..1461) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:A5H156" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A5H156" FT /protein_id="AEA10362.1" FT /translation="MDSRTGEIITATQAESGVFIWEVPNPLYFKIISHLDRPMFRPHDI FT ITIQIQFNHNLRRALGLHKCFLSFRIYTRLNPPTGRFLRVFKNECMKYLDSLGVISINN FT VIRTVRHVLYDVIAGTLDVIDHHSVNFKYY" FT gene complement(1202..1606) FT /gene="AC2" FT CDS complement(1202..1606) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:F2X1R2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:F2X1R2" FT /protein_id="AEA10363.1" FT /translation="MQSSSHSQSLSIQVPIKVQHKIAKKRSRRRRIDLDCGCSYFLSIN FT CHNHGFTHRGNHHCNSSGEWRFYLGGSKSPIFQNHQPPRQANVPTTRHHHHPDTIQPQP FT TESTGTSQMLPILSDLHTFESTDWEIFKSL" FT gene complement(1527..2594) FT /gene="AC1" FT CDS complement(1527..2594) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:F2X1R3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F2X1R3" FT /protein_id="AEA10364.1" FT /translation="MPPPTKFRINAKNYFLTYPQCSLTKEETLARLLAIVTPTNKKFIK FT ICRELHEDGSPHLHVLMQFEGKFQCKNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYM FT DKDGDTLEWGEFQIDGRSARGGPQTANDAYAQALNTGSKHEALKVIKELAPKDFILQFH FT NLNSNLDRIFVQEVPIYRSPFLSSSFNQVPEELEIWVSENVMSAAARPLRPKSIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLNPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPGASYIQFLNEEKQSALKTWALKNAEFVTLTEPL FT YSSTNQGPTQDCQET" FT gene complement(2135..2566) FT /gene="AC4" FT CDS complement(2135..2566) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F2X1R4" FT /protein_id="AEA10365.1" FT /translation="MPKIIFSLIHNAHSQKKRLLPDFWQLLHQPIKNSSRFAESSTKMG FT ALISTCLCNSRANSNARINDSSILYPQHDQPTSILTFRGQNRAPTSSPIWIKTGTHWNG FT ENSRSTADLHEEVHRQLMMLTPRHLTLGVSTKLLRSLKN" XX SQ Sequence 2766 BP; 747 A; 539 C; 637 G; 843 T; 0 other; accgggtggc cgcggggtct ctttaatgtg ggtcccactt attaaaacaa ccaatccgca 60 taggtcctct gagcttgtta gtcaaaaggt ggcctataaa tgttgaccag tcatactgga 120 ttgtcagaca tgtgggatcc attggtgaat gattttcctg agaccgtaca cggtcttagg 180 tgtatgctag ctgtcaaata cctgaaatac gttgaaagta cgtattcccc tgatacactc 240 ggatacgatc taatccgtga tctgatactt gttgtccgtg ccaaaaatta tggcgaagcg 300 agccggagat ataatcattt ccacacccgc ctccaaggtt cgacggaggc tgaacttcga 360 cagcccgtat cagaaccgtg tgcctgtcct cactgcccga ggcacacgaa aacagttatg 420 ggccaatcgg cccatgtaca ggaagcccag gatatttaaa ttatatagag gccttgatgt 480 gcctcgtgga tgtgaaggcc catgtaaagt ccagtcattt gagcaacgtc atgatgtggc 540 ccatgtcggg aaggtcatat gtatatctga tgttacacgt gggaatggta ttactcatcg 600 cgttggtaaa cgtttctgta ttaagtccgt gtatgttttg ggcaaggtct ggatggatga 660 aaacatcaag gtcaagaatc acacgaatag tgtaatgttt tttgttgtac gtgatcgaag 720 gccgtatggt actcctcaag aatttggcca agtatttaat acgtatgaca acgagccaag 780 tactgctact gtgaagaacg atctcagaga tagatttcaa gtgatcagga agttctatgc 840 aactgtgaca ggtggtcagt atgccagtag agaacagaca ttagtcagga gattcattag 900 agttaataat tatgttgtgt ataatcatca agaggctgcg aagtacgaga atcatacaga 960 gaacgcattg ttgttgtata tggcatgtac acatgcctca aatcctgtgt atgctacgtt 1020 aaaaatacga atctattttt atgattcggt aacaaattaa taatatttga aattcaccga 1080 atggtggtcg attacatcca aagtaccagc tattacatca tacagaacat gtcttacagt 1140 tctaattaca ttgttaatgg aaataacccc taaactatct aagtacttca tacattcatt 1200 tttaaagact cttaaaaatc tcccagtcgg tggattcaaa cgtgtgtaga tccgaaagga 1260 taggaagcat ttgtgaagtc ccagtgctct ccgtaggttg tggttgaatt gtatctggat 1320 ggtgatgatg tcgtgtggtc ggaacattgg cctgtcgagg tggctgatga ttttgaaata 1380 taggggattt ggaacctccc agataaaaac gccactctcc gcttgagttg cagtgatgat 1440 ttccccggtg cgtgaatcca tggttgtggc aattgattga taagaaatat gagcagccgc 1500 agtctaaatc tatccttcgt cgtctgctac gtttcttggc aatcttgtgt tggaccttga 1560 ttggtacttg aatagagagg ctctgtgagt gtgacgaact ctgcattttt caaagcccaa 1620 gtctttagtg cggattgctt ttcttcattt aaaaattgaa tatagctggc accgggccct 1680 ggattgcaga gaaagatagt gggaatccca cctttaattt gaactggctt accgtatttt 1740 gtattgcttt gccagtctct ttgggccccc atgaattcct taaagtgctt taaatagtgg 1800 gggtcgacat catcaatgac gttataccat gcgtcattac tgtaaacctt gggattcaag 1860 tctaggtgac cacataaata attatgtggt ccaagtgatc tggcccacat tgtcttccct 1920 gttcgactat cgccctcaag aacaattgat ttaggtctta atggccgcgc agcggcactc 1980 atcacatttt ctgaaaccca gatttcaagt tcttctggaa cttgattaaa agaagatgaa 2040 agaaatgggg acctataaat aggcacctct tgtacaaata tcctatctaa atttgaattt 2100 aaattgtgaa attgtaaaat aaaatcctta ggggctaatt ctttaatgac cttaagagct 2160 tcgtgcttac tcccagtgtt aagtgcctgg gcgtaagcat cattagctgt ctgtggacct 2220 cctcgtgcag atcggccgtc gatctggaat tctccccatt ccagtgtgtc cccgtcttta 2280 tccatatagg acttgacgtc ggagctcgat tttgccccct gaatgttagg atggaagtgg 2340 gctgatcgtg ttggggatac aagatcgaag aatcgttgat tcttgcattg gaatttgccc 2400 tcgaattgca taagcacgtg gagatgaggg ctcccatctt cgtggagctc tctgcaaatc 2460 ttgatgaatt ttttattggt tggtgtaaca attgccagaa gtctggcaag agtctcttct 2520 tttgtgagtg agcattgtgg ataagtgaga aaataatttt tggcatttat tctgaatttt 2580 gttggaggag gcatgttgac ttggtcaact ggtgtctcgc aaactgggtg atatatattg 2640 gtgtctgggg tcctataaat acttagacac ctaatggcac attcgtaaat atcttaccca 2700 cttttgaatt tgaatttcga atttgaattt aatttcggct ccaaaagcgg ccacccgtat 2760 aatatt 2766 //