ID   HQ288892; SV 1; linear; genomic RNA; STD; VRL; 666 BP.
XX
AC   HQ288892;
XX
DT   22-NOV-2010 (Rel. 106, Created)
DT   08-JAN-2012 (Rel. 111, Last updated, Version 2)
XX
DE   Alfalfa mosaic virus coat protein gene, complete cds.
XX
KW   .
XX
OS   Alfalfa mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Alfamovirus.
XX
RN   [1]
RP   1-666
RA   El-Helaly H.S., Ahmed A.A., Awad M.M., Soliman A.M.;
RT   "Biological and Molecular Characterization of Potato Infecting Alfalfa
RT   Mosaic Virus in Egypt";
RL   Int J Virol 8(1):106-113(2012).
XX
RN   [2]
RP   1-666
RA   Soliman A.M., Ahmed A.A., Elhelaly S.H., Awad M.M.;
RT   ;
RL   Submitted (21-SEP-2010) to the INSDC.
RL   Virus & Phytoplasma Research Section, Plant Pathology Research Institute,
RL   9- Elgamaa St., Giza 12619, Egypt
XX
DR   MD5; d8a8046e94d892e6e25ff5efbb772d59.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..666
FT                   /organism="Alfalfa mosaic virus"
FT                   /host="potato cv. spunta"
FT                   /mol_type="genomic RNA"
FT                   /country="Egypt:El-Monofia"
FT                   /collection_date="Mar-2010"
FT                   /PCR_primers="fwd_name: AMV-F2, fwd_seq:
FT                   atcatgagttcttcacaaaagaa, rev_name: AMVR2, rev_seq:
FT                   tcaatgacgatcaagatcgtc"
FT                   /db_xref="taxon:12321"
FT   CDS             1..666
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:E5L3L8"
FT                   /db_xref="UniProtKB/TrEMBL:E5L3L8"
FT                   /protein_id="ADQ27870.1"
FT                   /translation="MSSSQKKAGGKAGKPTKRSQNYAALRKAQQPKPPALKVPVVKPTN
FT                   TILPQTGCVWQSLGTPLSLSSFNGLGVRFLYSFLKDFVGPRILEEDLIYRMVFSITPYH
FT                   AGTFCLTDDVTTEDGRAVAHGNPMQEFPHGVFHANEKFGFELVFTAPTHAGMQNQNFKH
FT                   SYAVALCLDFDAQPEGSKIPSYRFNEVWVERKAFPRAGPLRSLITVGLLDEADDLDRH"
XX
SQ   Sequence 666 BP; 158 A; 163 C; 173 G; 172 T; 0 other;
     atgagttctt cacaaaagaa agctggtggg aaagctggta aacctactaa acgttctcag        60
     aactatgctg ctctacgcaa agctcaacag ccgaagcctc cggcgttgaa agtcccggtt       120
     gtaaaaccga cgaataccat actgccacag acgggctgtg tgtggcaaag cctcgggacc       180
     cctctgagtc tgagctcttt taatgggctc ggcgtgagat tcctctacag ttttctgaag       240
     gatttcgtgg gacctcggat cctcgaagag gatctgattt acaggatggt gttttctata       300
     acaccgtacc atgccggcac tttttgtctc actgatgacg tgacgactga ggatggtagg       360
     gccgttgcgc atggtaatcc catgcaagaa tttcctcatg gcgtgtttca cgctaatgag       420
     aagttcgggt ttgagttggt cttcacagct cctacccatg cgggaatgca aaatcaaaat       480
     ttcaagcatt cctatgccgt agccctctgt ttggacttcg acgcgcagcc tgagggatct       540
     aaaattccct cataccgatt caacgaagtt tgggtcgaga gaaaggcgtt tccgcgagca       600
     gggcccctcc gcagtttgat tactgtgggg ctgctcgacg aagctgacga tcttgatcgt       660
     cattga                                                                  666
//