ID HQ283392; SV 1; linear; genomic RNA; STD; VRL; 3356 BP. XX AC HQ283392; XX DT 21-FEB-2011 (Rel. 107, Created) DT 21-FEB-2011 (Rel. 107, Last updated, Version 1) XX DE Cucumber mosaic virus isolate SFQT1-2 segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3356 RA Du Y., Xiang B.; RT "Complete nucleotide sequence of the RNA1 of Cucumber mosaic virus RT infecting processing tomato in Xinjiang"; RL Unpublished. XX RN [2] RP 1-3356 RA Du Y., Xiang B.; RT ; RL Submitted (28-AUG-2010) to the INSDC. RL Phytopathology, ShiHeZi University, ShiHeZi, Xinjiang 8320003, China XX DR MD5; d42f20cec324a11b7a30cedd467c6c65. DR RFAM; RF01084; TLS-PK3. XX CC GenBank Accession Numbers HQ283391-HQ283394 represent the complete CC genome of Cucumber mosaic virus SFQT1-2. XX FH Key Location/Qualifiers FH FT source 1..3356 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="tomato" FT /isolate="SFQT1-2" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12305" FT CDS 95..3076 FT /codon_start=1 FT /product="1a" FT /db_xref="GOA:F1CGZ3" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:F1CGZ3" FT /protein_id="ADX86744.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLGVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GVIPELNCQWRKIRNAFSETEDVTPLSGKLNSTIFSHVRKFKTMVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYRGMTYGIERCVIHAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVEWKTVRILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSSVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGKILAAQKAEKLAEKLAQPVIEVSDRPEAPSPTPDDTVDVCGREREVSELDSLST FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYVTVDPMVNVHFSSGKWMRPVPEGTVYSVGYNERGLGPKSDGELYIVNGECVICNSES FT LSAVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACAFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPRGTHSKYTKW FT VSQSKVKRSVTSRAIASVTLVDLDSSRFYITMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGILNGDLIAEC FT VARA" XX SQ Sequence 3356 BP; 846 A; 751 C; 814 G; 945 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaacta ccctttgaaa 60 aacctctctt tctaatcttt tctctgaaat tcctatggcg acgtcctcgt tcaacatcaa 120 tgaattggta gcctcccacg gcgataaagg actgctcgcg accgccctcg ttgataagac 180 agctcatgag cagctcgagg agcaattaca gcatcaacgt aggggccgta aggtctacat 240 ccggaacgtt ctgggtgtaa aggattctga agtcatccgg aatcggtatg gagggaagta 300 cgacctccat cttacccagc aggagtttgc tccccacggc ctagctggtg ccctccgctt 360 gtgtgaaact ctcgattgtc tagactcttt cccttcatca ggtctgcggc aggacctcgt 420 cttagacttc ggaggaagtt gggtcacaca ttacctccgc ggacacaacg tacactgctg 480 ttccccttgt ttgggtattc gcgataaaat gcgccacgcg gaacgtttaa tgaacatgcg 540 caagatcatc ttgaacgatc cacaacagtt cgatggtcga cagccggact tctgcactca 600 tccggctgct gattgcaaag tacaagccca ctttgctata tctattcatg gaggttatga 660 tatgggcttt agaggattat gtgaagcaat gaacgctcac ggaaccacca ttttgaaggg 720 aacgatgatg ttcgatggtg cgatgatgtt tgacgaccag ggtgtaatac ctgaacttaa 780 ttgccagtgg aggaagatta ggaatgcttt ctctgagact gaagacgtca caccgctgtc 840 tggtaaactt aattccacaa tattttccca cgtgcgtaaa ttcaagacta tggtagcttt 900 tgattttatc aatgagtcta ctatgtctta tgttcatgat tgggagaata taaaatcttt 960 tctcacagac cagacttact cataccgagg gatgacttat ggtattgagc gttgtgttat 1020 tcatgccggt attatgacgt ataagatcat tggtgtacct ggaatgtgcc cacccgaact 1080 cattcgacat tgtatttggt tcccctctat taaagactat gttggtctga agattcccgc 1140 gtcgcaggac ttagttgagt ggaaaacagt gcgtatttta acgtcaacat tacgtgaaac 1200 ggaggaaatt gctatgaggt gttacaacga taagaaagca tggatggaac agttcaaggt 1260 tatcctagga gttctatctg cgaaatcatc taccattgtt attaatggta tgtctatgca 1320 atctggcgaa cgcattgata ttaacgacta tcattatatt ggcttcgcta ttctcctcca 1380 cacaaaaatg aagtatgaac agttgggaaa aatgtatgat atgtggaatg cttcgagcat 1440 ctcgaagtgg tttgcggcgt tgactcgtcc gctgcgcgtg tttttctcca gcgttgttca 1500 cgctctgttc ccgaccttga gaccccgcga ggaaaaagaa ttcctgatta agctctccac 1560 cttcgtgact tttaatgaag agtgctcatt tgacggtgga gaggaatggg acgtgatatc 1620 atccgctgca tacgttgcta cgcaggctgt taccgatggg aagattttgg ctgcgcagaa 1680 agccgagaag ctcgctgaga agcttgcaca acccgtgatt gaggtatcgg acagacctga 1740 ggcgccatct ccaacgcctg atgatacagt tgatgtttgt ggaagagagc gagaggtttc 1800 ggaactcgac tctctatcaa ctcagacacg ttcccccatc actagagttg ctgaaagggc 1860 cactgctatg ttagagtatg ccgcttatga gaaacaattg cacgacacca cagtgtctaa 1920 tttgaaacgt atttggaaca tggcgggtgg tgatgacaag agaaactccc ttgaaggtaa 1980 tttgaagttt gtttttgaca cgtacgttac tgttgacccg atggtgaatg ttcatttctc 2040 ctcgggaaag tggatgcgtc ctgtacctga gggaaccgtt tactctgttg gttataatga 2100 acgcggttta ggtccgaagt ctgatggaga gctttacatc gttaatggtg agtgtgtgat 2160 ctgcaacagt gagtctttat ccgcagtcac ccgctcactt caagccccaa ctggaactat 2220 tagtcaggtc gacggagttg ctggttgtgg gaaaactacg gcgataaaat ccatttttga 2280 gccgtccaca gacatgatcg ttaccgcgaa caagaaatcc gctcaagacg ttcgtatggc 2340 acttttcaaa tcgtcggatt ccaaagaagc ctgtgccttc gtccgtactg ccgattctgt 2400 cctacttaat gaatgtccga ctgtcagtag ggttttggtt gacgaggttg tgttgcttca 2460 ttttggccaa ttgtgtgctg tcatgtccaa actgaaggct gtccgagcta tatgttttgg 2520 ggattcggag cagattgctt tttcttctcg cgatgcctcg tttgacatgc gtttctctaa 2580 gattattcct gatgaaacta gtgatgcgga taccacattc cgtagcccac aagatgtcgt 2640 gccgcttgtg cgtttaatgg ctacgaaggc tcttccgaga ggaactcatt cgaagtacac 2700 gaagtgggtt tctcaatcta aagtgaaaag atctgttacg tctcgtgcca tcgctagtgt 2760 gacattggtt gatctggatt catccaggtt ttatatcacg atgacccaag ctgataaggc 2820 ctcactgatt tcaagagcga aagagatgaa cttaccaaag actttttgga atgaaagaat 2880 caaaactgtt cacgagtccc aaggcatctc tgaagaccac gttactttgg taagattgaa 2940 gagcacaaaa tgtgacctgt tcaagaaatt ttcatactgt cttgttgcct tgacgagaca 3000 caaggtcaca ttccgctacg agtactgcgg tatattgaac ggcgatttga tcgccgaatg 3060 tgttgctcgt gcttagcggt ttccctcctt cgggcgggat ctgagttagc ggtaatctac 3120 aaaccgtctg aagtcactaa actctctgag gtgaacgggt tgtccatcca gctaacggct 3180 aaaatggtca gtcgcggaga aatccgcgcc agcagactta caagtctctg aggcgccttt 3240 gaaaccatct cctaggtttc ttcggaagga cttcggtccg tgtacttcta gcacaacgtg 3300 ctagtttcag ggtacgggtg ccctcccact ttgtgggagc ctataaaagg agacca 3356 //